A citation-based method for searching scientific literature

Kate Beishline, Olga Vladimirova, Stephen Tutton, Zhuo Wang, Zhong Deng, Paul M Lieberman. Nat Commun 2017
Times Cited: 34







List of co-cited articles
267 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Telomeric repeat containing RNA and RNA surveillance factors at mammalian chromosome ends.
Claus M Azzalin, Patrick Reichenbach, Lela Khoriauli, Elena Giulotto, Joachim Lingner. Science 2007
799
55


RNaseH1 regulates TERRA-telomeric DNA hybrids and telomere maintenance in ALT tumour cells.
Rajika Arora, Yongwoo Lee, Harry Wischnewski, Catherine M Brun, Tobias Schwarz, Claus M Azzalin. Nat Commun 2014
189
50

TERRA RNA binding to TRF2 facilitates heterochromatin formation and ORC recruitment at telomeres.
Zhong Deng, Julie Norseen, Andreas Wiedmer, Harold Riethman, Paul M Lieberman. Mol Cell 2009
339
44

TERRA RNA Antagonizes ATRX and Protects Telomeres.
Hsueh-Ping Chu, Catherine Cifuentes-Rojas, Barry Kesner, Eric Aeby, Hun-Goo Lee, Chunyao Wei, Hyun Jung Oh, Myriam Boukhali, Wilhelm Haas, Jeannie T Lee. Cell 2017
94
44

CpG-island promoters drive transcription of human telomeres.
Solomon G Nergadze, Benjamin O Farnung, Harry Wischnewski, Lela Khoriauli, Valerio Vitelli, Raghav Chawla, Elena Giulotto, Claus M Azzalin. RNA 2009
144
38

Telomere Length Determines TERRA and R-Loop Regulation through the Cell Cycle.
Marco Graf, Diego Bonetti, Arianna Lockhart, Kamar Serhal, Vanessa Kellner, André Maicher, Pascale Jolivet, Maria Teresa Teixeira, Brian Luke. Cell 2017
103
35

Functional characterization of the TERRA transcriptome at damaged telomeres.
Antonio Porro, Sascha Feuerhahn, Julien Delafontaine, Harold Riethman, Jacques Rougemont, Joachim Lingner. Nat Commun 2014
125
35

Telomeric RNA-DNA hybrids affect telomere-length dynamics and senescence.
Bettina Balk, André Maicher, Martina Dees, Julia Klermund, Sarah Luke-Glaser, Katharina Bender, Brian Luke. Nat Struct Mol Biol 2013
173
29

Telomeric noncoding RNA TERRA is induced by telomere shortening to nucleate telomerase molecules at short telomeres.
Emilio Cusanelli, Carmina Angelica Perez Romero, Pascal Chartrand. Mol Cell 2013
132
29

The non-coding RNA TERRA is a natural ligand and direct inhibitor of human telomerase.
Sophie Redon, Patrick Reichenbach, Joachim Lingner. Nucleic Acids Res 2010
218
29

The Rat1p 5' to 3' exonuclease degrades telomeric repeat-containing RNA and promotes telomere elongation in Saccharomyces cerevisiae.
Brian Luke, Andrea Panza, Sophie Redon, Nahid Iglesias, Zhijian Li, Joachim Lingner. Mol Cell 2008
201
26

Telomere length regulates TERRA levels through increased trimethylation of telomeric H3K9 and HP1α.
Nausica Arnoult, Amandine Van Beneden, Anabelle Decottignies. Nat Struct Mol Biol 2012
150
26

A role for CTCF and cohesin in subtelomere chromatin organization, TERRA transcription, and telomere end protection.
Zhong Deng, Zhuo Wang, Nick Stong, Robert Plasschaert, Aliah Moczan, Horng-Shen Chen, Sufeng Hu, Priyankara Wikramasinghe, Ramana V Davuluri, Marisa S Bartolomei,[...]. EMBO J 2012
100
26

Telomeric RNAs are essential to maintain telomeres.
Juan José Montero, Isabel López de Silanes, Osvaldo Graña, Maria A Blasco. Nat Commun 2016
52
26

TERRA promotes telomerase-mediated telomere elongation in Schizosaccharomyces pombe.
Martin Moravec, Harry Wischnewski, Amadou Bah, Yan Hu, Na Liu, Lorenzo Lafranchi, Megan C King, Claus M Azzalin. EMBO Rep 2016
46
23

Identification of TERRA locus unveils a telomere protection role through association to nearly all chromosomes.
Isabel López de Silanes, Osvaldo Graña, Maria Luigia De Bonis, Orlando Dominguez, David G Pisano, Maria A Blasco. Nat Commun 2014
52
23

Telomeres in ICF syndrome cells are vulnerable to DNA damage due to elevated DNA:RNA hybrids.
Shira Sagie, Shir Toubiana, Stella R Hartono, Hagar Katzir, Aya Tzur-Gilat, Shany Havazelet, Claire Francastel, Guillaume Velasco, Frédéric Chédin, Sara Selig. Nat Commun 2017
49
23

Hypomethylation of subtelomeric regions in ICF syndrome is associated with abnormally short telomeres and enhanced transcription from telomeric regions.
Shiran Yehezkel, Yardena Segev, Evani Viegas-Péquignot, Karl Skorecki, Sara Selig. Hum Mol Genet 2008
155
23

Shelterin-Mediated Telomere Protection.
Titia de Lange. Annu Rev Genet 2018
181
23

Molecular dissection of telomeric repeat-containing RNA biogenesis unveils the presence of distinct and multiple regulatory pathways.
Antonio Porro, Sascha Feuerhahn, Patrick Reichenbach, Joachim Lingner. Mol Cell Biol 2010
139
23


TERRA-reinforced association of LSD1 with MRE11 promotes processing of uncapped telomeres.
Antonio Porro, Sascha Feuerhahn, Joachim Lingner. Cell Rep 2014
74
20

Mammalian telomeres resemble fragile sites and require TRF1 for efficient replication.
Agnel Sfeir, Settapong T Kosiyatrakul, Dirk Hockemeyer, Sheila L MacRae, Jan Karlseder, Carl L Schildkraut, Titia de Lange. Cell 2009
627
20

TRF1 participates in chromosome end protection by averting TRF2-dependent telomeric R loops.
Yong Woo Lee, Rajika Arora, Harry Wischnewski, Claus M Azzalin. Nat Struct Mol Biol 2018
28
25

TERRA transcripts are bound by a complex array of RNA-binding proteins.
Isabel López de Silanes, Martina Stagno d'Alcontres, Maria A Blasco. Nat Commun 2010
94
20

DNA methyltransferases control telomere length and telomere recombination in mammalian cells.
Susana Gonzalo, Isabel Jaco, Mario F Fraga, Taiping Chen, En Li, Manel Esteller, María A Blasco. Nat Cell Biol 2006
414
20

Nuclear respiratory factor 1 and endurance exercise promote human telomere transcription.
Aurélie Diman, Joanna Boros, Florian Poulain, Julie Rodriguez, Marin Purnelle, Harikleia Episkopou, Luc Bertrand, Marc Francaux, Louise Deldicque, Anabelle Decottignies. Sci Adv 2016
40
17

TERRA and hnRNPA1 orchestrate an RPA-to-POT1 switch on telomeric single-stranded DNA.
Rachel Litman Flynn, Richard C Centore, Roderick J O'Sullivan, Rekha Rai, Alice Tse, Zhou Songyang, Sandy Chang, Jan Karlseder, Lee Zou. Nature 2011
214
17

Subtelomeric repetitive elements determine TERRA regulation by Rap1/Rif and Rap1/Sir complexes in yeast.
Nahid Iglesias, Sophie Redon, Verena Pfeiffer, Martina Dees, Joachim Lingner, Brian Luke. EMBO Rep 2011
65
17

The telomeric transcriptome of Schizosaccharomyces pombe.
Amadou Bah, Harry Wischnewski, Vadim Shchepachev, Claus M Azzalin. Nucleic Acids Res 2012
68
17

Deregulated telomere transcription causes replication-dependent telomere shortening and promotes cellular senescence.
André Maicher, Lisa Kastner, Martina Dees, Brian Luke. Nucleic Acids Res 2012
65
17

Alternative Lengthening of Telomeres is characterized by reduced compaction of telomeric chromatin.
Harikleia Episkopou, Irena Draskovic, Amandine Van Beneden, Gaëlle Tilman, Marina Mattiussi, Matthieu Gobin, Nausica Arnoult, Arturo Londoño-Vallejo, Anabelle Decottignies. Nucleic Acids Res 2014
94
17

Specific association of human telomerase activity with immortal cells and cancer.
N W Kim, M A Piatyszek, K R Prowse, C B Harley, M D West, P L Ho, G M Coviello, W E Wright, S L Weinrich, J W Shay. Science 1994
17

Epigenetic regulation of telomere length in mammalian cells by the Suv39h1 and Suv39h2 histone methyltransferases.
Marta García-Cao, Roderick O'Sullivan, Antoine H F M Peters, Thomas Jenuwein, María A Blasco. Nat Genet 2004
388
17


TERRA recruitment of polycomb to telomeres is essential for histone trymethylation marks at telomeric heterochromatin.
Juan J Montero, Isabel López-Silanes, Diego Megías, Mario F Fraga, Álvaro Castells-García, Maria A Blasco. Nat Commun 2018
50
17

Telomere functions grounding on TERRA firma.
Claus M Azzalin, Joachim Lingner. Trends Cell Biol 2015
109
14

How shelterin protects mammalian telomeres.
Wilhelm Palm, Titia de Lange. Annu Rev Genet 2008
14

siRNA-mediated methylation of Arabidopsis telomeres.
Jan Vrbsky, Svetlana Akimcheva, J Matthew Watson, Thomas L Turner, Lucia Daxinger, Boris Vyskot, Werner Aufsatz, Karel Riha. PLoS Genet 2010
87
14


Quantitative interaction screen of telomeric repeat-containing RNA reveals novel TERRA regulators.
Marion Scheibe, Nausica Arnoult, Dennis Kappei, Frank Buchholz, Anabelle Decottignies, Falk Butter, Matthias Mann. Genome Res 2013
45
14

Telomerase activity is associated with an increase in DNA methylation at the proximal subtelomere and a reduction in telomeric transcription.
Laura J Ng, Jennifer E Cropley, Hilda A Pickett, Roger R Reddel, Catherine M Suter. Nucleic Acids Res 2009
102
14




Formation of telomeric repeat-containing RNA (TERRA) foci in highly proliferating mouse cerebellar neuronal progenitors and medulloblastoma.
Zhong Deng, Zhuo Wang, Chaomei Xiang, Aliah Molczan, Valérie Baubet, Jose Conejo-Garcia, Xiaowei Xu, Paul M Lieberman, Nadia Dahmane. J Cell Sci 2012
45
11


The role of double-strand break repair pathways at functional and dysfunctional telomeres.
Ylli Doksani, Titia de Lange. Cold Spring Harb Perspect Biol 2014
81
11



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.