A citation-based method for searching scientific literature

Wei Zhong Leong, Shi Hao Tan, Phuong Cao Thi Ngoc, Stella Amanda, Alice Wei Yee Yam, Wei-Siang Liau, Zhiyuan Gong, Lee N Lawton, Daniel G Tenen, Takaomi Sanda. Genes Dev 2017
Times Cited: 30







List of co-cited articles
296 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Core transcriptional regulatory circuit controlled by the TAL1 complex in human T cell acute lymphoblastic leukemia.
Takaomi Sanda, Lee N Lawton, M Inmaculada Barrasa, Zi Peng Fan, Holger Kohlhammer, Alejandro Gutierrez, Wenxue Ma, Jessica Tatarek, Yebin Ahn, Michelle A Kelliher,[...]. Cancer Cell 2012
185
36

Oncogene regulation. An oncogenic super-enhancer formed through somatic mutation of a noncoding intergenic element.
Marc R Mansour, Brian J Abraham, Lars Anders, Alla Berezovskaya, Alejandro Gutierrez, Adam D Durbin, Julia Etchin, Lee Lawton, Stephen E Sallan, Lewis B Silverman,[...]. Science 2014
433
36

The genomic landscape of pediatric and young adult T-lineage acute lymphoblastic leukemia.
Yu Liu, John Easton, Ying Shao, Jamie Maciaszek, Zhaoming Wang, Mark R Wilkinson, Kelly McCastlain, Michael Edmonson, Stanley B Pounds, Lei Shi,[...]. Nat Genet 2017
392
26

Myc-induced T cell leukemia in transgenic zebrafish.
David M Langenau, David Traver, Adolfo A Ferrando, Jeffery L Kutok, Jon C Aster, John P Kanki, Shuo Lin, Ed Prochownik, Nikolaus S Trede, Leonard I Zon,[...]. Science 2003
380
26

Targeting transcription regulation in cancer with a covalent CDK7 inhibitor.
Nicholas Kwiatkowski, Tinghu Zhang, Peter B Rahl, Brian J Abraham, Jessica Reddy, Scott B Ficarro, Anahita Dastur, Arnaud Amzallag, Sridhar Ramaswamy, Bethany Tesar,[...]. Nature 2014
470
23

Master transcription factors and mediator establish super-enhancers at key cell identity genes.
Warren A Whyte, David A Orlando, Denes Hnisz, Brian J Abraham, Charles Y Lin, Michael H Kagey, Peter B Rahl, Tong Ihn Lee, Richard A Young. Cell 2013
20

Activation of proto-oncogenes by disruption of chromosome neighborhoods.
Denes Hnisz, Abraham S Weintraub, Daniel S Day, Anne-Laure Valton, Rasmus O Bak, Charles H Li, Johanna Goldmann, Bryan R Lajoie, Zi Peng Fan, Alla A Sigova,[...]. Science 2016
493
20

APOBEC signature mutation generates an oncogenic enhancer that drives LMO1 expression in T-ALL.
Z Li, B J Abraham, A Berezovskaya, N Farah, Y Liu, T Leon, A Fielding, S H Tan, T Sanda, A S Weintraub,[...]. Leukemia 2017
34
20

JDP2: An oncogenic bZIP transcription factor in T cell acute lymphoblastic leukemia.
Marc R Mansour, Shuning He, Zhaodong Li, Riadh Lobbardi, Brian J Abraham, Clemens Hug, Sunniyat Rahman, Theresa E Leon, You-Yi Kuang, Mark W Zimmerman,[...]. J Exp Med 2018
10
60

Pten mediates Myc oncogene dependence in a conditional zebrafish model of T cell acute lymphoblastic leukemia.
Alejandro Gutierrez, Ruta Grebliunaite, Hui Feng, Elena Kozakewich, Shizhen Zhu, Feng Guo, Elspeth Payne, Marc Mansour, Suzanne E Dahlberg, Donna S Neuberg,[...]. J Exp Med 2011
84
20

Notch signaling expands a pre-malignant pool of T-cell acute lymphoblastic leukemia clones without affecting leukemia-propagating cell frequency.
J S Blackburn, S Liu, D M Raiser, S A Martinez, H Feng, N D Meeker, J Gentry, D Neuberg, A T Look, S Ramaswamy,[...]. Leukemia 2012
51
20

Aberrant activation of the GIMAP enhancer by oncogenic transcription factors in T-cell acute lymphoblastic leukemia.
W S Liau, S H Tan, P C T Ngoc, C Q Wang, V Tergaonkar, H Feng, Z Gong, M Osato, A T Look, T Sanda. Leukemia 2017
21
23

Acute lymphoblastic leukaemia.
Ching-Hon Pui, Leslie L Robison, A Thomas Look. Lancet 2008
961
16

TRIB2 reinforces the oncogenic transcriptional program controlled by the TAL1 complex in T-cell acute lymphoblastic leukemia.
S H Tan, A W Y Yam, L N Lawton, R W J Wong, R A Young, A T Look, T Sanda. Leukemia 2016
10
50

Genome-wide mapping and characterization of Notch-regulated long noncoding RNAs in acute leukemia.
Thomas Trimarchi, Erhan Bilal, Panagiotis Ntziachristos, Giulia Fabbri, Riccardo Dalla-Favera, Aristotelis Tsirigos, Iannis Aifantis. Cell 2014
313
16

Super-enhancers in the control of cell identity and disease.
Denes Hnisz, Brian J Abraham, Tong Ihn Lee, Ashley Lau, Violaine Saint-André, Alla A Sigova, Heather A Hoke, Richard A Young. Cell 2013
16

Small genomic insertions form enhancers that misregulate oncogenes.
Brian J Abraham, Denes Hnisz, Abraham S Weintraub, Nicholas Kwiatkowski, Charles H Li, Zhaodong Li, Nina Weichert-Leahey, Sunniyat Rahman, Yu Liu, Julia Etchin,[...]. Nat Commun 2017
43
16

HOXA genes are included in genetic and biologic networks defining human acute T-cell leukemia (T-ALL).
Jean Soulier, Emmanuelle Clappier, Jean-Michel Cayuela, Armelle Regnault, Marina García-Peydró, Hervé Dombret, André Baruchel, Maria-Luisa Toribio, François Sigaux. Blood 2005
261
16

The genetic basis of early T-cell precursor acute lymphoblastic leukaemia.
Jinghui Zhang, Li Ding, Linda Holmfeldt, Gang Wu, Sue L Heatley, Debbie Payne-Turner, John Easton, Xiang Chen, Jianmin Wang, Michael Rusch,[...]. Nature 2012
16

Gene expression signatures define novel oncogenic pathways in T cell acute lymphoblastic leukemia.
Adolfo A Ferrando, Donna S Neuberg, Jane Staunton, Mignon L Loh, Christine Huard, Susana C Raimondi, Fred G Behm, Ching Hon Pui, James R Downing, D Gary Gilliland,[...]. Cancer Cell 2002
782
16

Genetic Basis of Acute Lymphoblastic Leukemia.
Ilaria Iacobucci, Charles G Mullighan. J Clin Oncol 2017
217
16

The genetics and mechanisms of T cell acute lymphoblastic leukaemia.
Laura Belver, Adolfo Ferrando. Nat Rev Cancer 2016
201
16

Activating mutations of NOTCH1 in human T cell acute lymphoblastic leukemia.
Andrew P Weng, Adolfo A Ferrando, Woojoong Lee, John P Morris, Lewis B Silverman, Cheryll Sanchez-Irizarry, Stephen C Blacklow, A Thomas Look, Jon C Aster. Science 2004
16

Recurrent SPI1 (PU.1) fusions in high-risk pediatric T cell acute lymphoblastic leukemia.
Masafumi Seki, Shunsuke Kimura, Tomoya Isobe, Kenichi Yoshida, Hiroo Ueno, Yaeko Nakajima-Takagi, Changshan Wang, Lin Lin, Ayana Kon, Hiromichi Suzuki,[...]. Nat Genet 2017
70
16

Phenothiazines induce PP2A-mediated apoptosis in T cell acute lymphoblastic leukemia.
Alejandro Gutierrez, Li Pan, Richard W J Groen, Frederic Baleydier, Alex Kentsis, Jason Marineau, Ruta Grebliunaite, Elena Kozakewich, Casie Reed, Francoise Pflumio,[...]. J Clin Invest 2014
133
16

Cre/lox-regulated transgenic zebrafish model with conditional myc-induced T cell acute lymphoblastic leukemia.
David M Langenau, Hui Feng, Stephane Berghmans, John P Kanki, Jeffery L Kutok, A Thomas Look. Proc Natl Acad Sci U S A 2005
184
16

TAL1/SCL induces leukemia by inhibiting the transcriptional activity of E47/HEB.
Jennifer O'Neil, Jennifer Shank, Nicole Cusson, Cornelis Murre, Michelle Kelliher. Cancer Cell 2004
143
13


Modification of enhancer chromatin: what, how, and why?
Eliezer Calo, Joanna Wysocka. Mol Cell 2013
779
13

Selective inhibition of tumor oncogenes by disruption of super-enhancers.
Jakob Lovén, Heather A Hoke, Charles Y Lin, Ashley Lau, David A Orlando, Christopher R Vakoc, James E Bradner, Tong Ihn Lee, Richard A Young. Cell 2013
13


Site- and allele-specific polycomb dysregulation in T-cell leukaemia.
Jean-Marc Navarro, Aurore Touzart, Lydie C Pradel, Marie Loosveld, Myriam Koubi, Romain Fenouil, Sandrine Le Noir, Muhammad Ahmad Maqbool, Ester Morgado, Claude Gregoire,[...]. Nat Commun 2015
35
13


Genetic predisposition to neuroblastoma mediated by a LMO1 super-enhancer polymorphism.
Derek A Oldridge, Andrew C Wood, Nina Weichert-Leahey, Ian Crimmins, Robyn Sussman, Cynthia Winter, Lee D McDaniel, Maura Diamond, Lori S Hart, Shizhen Zhu,[...]. Nature 2015
186
13


Gene targeting of Desrt, a novel ARID class DNA-binding protein, causes growth retardation and abnormal development of reproductive organs.
M H Lahoud, S Ristevski, D J Venter, L S Jermiin, I Bertoncello, S Zavarsek, S Hasthorpe, J Drago, D de Kretser, P J Hertzog,[...]. Genome Res 2001
82
13

PKA-dependent regulation of the histone lysine demethylase complex PHF2-ARID5B.
Atsushi Baba, Fumiaki Ohtake, Yosuke Okuno, Kenichi Yokota, Maiko Okada, Yuuki Imai, Min Ni, Clifford A Meyer, Katsuhide Igarashi, Jun Kanno,[...]. Nat Cell Biol 2011
112
13

FBW7 mutations in leukemic cells mediate NOTCH pathway activation and resistance to gamma-secretase inhibitors.
Jennifer O'Neil, Jonathan Grim, Peter Strack, Sudhir Rao, Deanne Tibbitts, Christopher Winter, James Hardwick, Markus Welcker, Jules P Meijerink, Rob Pieters,[...]. J Exp Med 2007
494
13

Molecular pathogenesis of T-cell leukaemia and lymphoma.
Iannis Aifantis, Elizabeth Raetz, Silvia Buonamici. Nat Rev Immunol 2008
297
13

High frequency of PTEN, PI3K, and AKT abnormalities in T-cell acute lymphoblastic leukemia.
Alejandro Gutierrez, Takaomi Sanda, Ruta Grebliunaite, Arkaitz Carracedo, Leonardo Salmena, Yebin Ahn, Suzanne Dahlberg, Donna Neuberg, Lisa A Moreau, Stuart S Winter,[...]. Blood 2009
318
13

Modeling T-cell acute lymphoblastic leukemia induced by the SCL and LMO1 oncogenes.
Mathieu Tremblay, Cédric S Tremblay, Sabine Herblot, Peter D Aplan, Josée Hébert, Claude Perreault, Trang Hoang. Genes Dev 2010
83
13

TOX Regulates Growth, DNA Repair, and Genomic Instability in T-cell Acute Lymphoblastic Leukemia.
Riadh Lobbardi, Jordan Pinder, Barbara Martinez-Pastor, Marina Theodorou, Jessica S Blackburn, Brian J Abraham, Yuka Namiki, Marc Mansour, Nouran S Abdelfattah, Aleksey Molodtsov,[...]. Cancer Discov 2017
30
13

T-lymphoblastic lymphoma cells express high levels of BCL2, S1P1, and ICAM1, leading to a blockade of tumor cell intravasation.
Hui Feng, David L Stachura, Richard M White, Alejandro Gutierrez, Lu Zhang, Takaomi Sanda, Cicely A Jette, Joseph R Testa, Donna S Neuberg, David M Langenau,[...]. Cancer Cell 2010
115
13

RUNX1 is required for oncogenic Myb and Myc enhancer activity in T-cell acute lymphoblastic leukemia.
AHyun Choi, Anuradha Illendula, John A Pulikkan, Justine E Roderick, Jessica Tesell, Jun Yu, Nicole Hermance, Lihua Julie Zhu, Lucio H Castilla, John H Bushweller,[...]. Blood 2017
38
13

NOTCH1 directly regulates c-MYC and activates a feed-forward-loop transcriptional network promoting leukemic cell growth.
Teresa Palomero, Wei Keat Lim, Duncan T Odom, Maria Luisa Sulis, Pedro J Real, Adam Margolin, Kelly C Barnes, Jennifer O'Neil, Donna Neuberg, Andrew P Weng,[...]. Proc Natl Acad Sci U S A 2006
592
13

c-Myc is an important direct target of Notch1 in T-cell acute lymphoblastic leukemia/lymphoma.
Andrew P Weng, John M Millholland, Yumi Yashiro-Ohtani, Marie Laure Arcangeli, Arthur Lau, Carol Wai, Cristina Del Bianco, Carlos G Rodriguez, Hong Sai, John Tobias,[...]. Genes Dev 2006
627
13

Identification of novel lncRNAs regulated by the TAL1 complex in T-cell acute lymphoblastic leukemia.
Phuong Cao Thi Ngoc, Shi Hao Tan, Tze King Tan, Min Min Chan, Zhenhua Li, Allen E J Yeoh, Daniel G Tenen, Takaomi Sanda. Leukemia 2018
22
18

Clonal evolution enhances leukemia-propagating cell frequency in T cell acute lymphoblastic leukemia through Akt/mTORC1 pathway activation.
Jessica S Blackburn, Sali Liu, Jayme L Wilder, Kimberly P Dobrinski, Riadh Lobbardi, Finola E Moore, Sarah A Martinez, Eleanor Y Chen, Charles Lee, David M Langenau. Cancer Cell 2014
75
13

Heritable T-cell malignancy models established in a zebrafish phenotypic screen.
J K Frazer, N D Meeker, L Rudner, D F Bradley, A C H Smith, B Demarest, D Joshi, E E Locke, S A Hutchinson, S Tripp,[...]. Leukemia 2009
53
13

Heat-shock induction of T-cell lymphoma/leukaemia in conditional Cre/lox-regulated transgenic zebrafish.
Hui Feng, David M Langenau, Jennifer A Madge, Andre Quinkertz, Alejandro Gutierrez, Donna S Neuberg, John P Kanki, A Thomas Look. Br J Haematol 2007
92
13


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.