A citation-based method for searching scientific literature

Ludovic S Mure, Hiep D Le, Giorgia Benegiamo, Max W Chang, Luis Rios, Ngalla Jillani, Maina Ngotho, Thomas Kariuki, Ouria Dkhissi-Benyahya, Howard M Cooper, Satchidananda Panda. Science 2018
Times Cited: 299







List of co-cited articles
1348 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A circadian gene expression atlas in mammals: implications for biology and medicine.
Ray Zhang, Nicholas F Lahens, Heather I Ballance, Michael E Hughes, John B Hogenesch. Proc Natl Acad Sci U S A 2014
49


Transcriptional architecture and chromatin landscape of the core circadian clock in mammals.
Nobuya Koike, Seung-Hee Yoo, Hung-Chung Huang, Vivek Kumar, Choogon Lee, Tae-Kyung Kim, Joseph S Takahashi. Science 2012
859
22

A database of tissue-specific rhythmically expressed human genes has potential applications in circadian medicine.
Marc D Ruben, Gang Wu, David F Smith, Robert E Schmidt, Lauren J Francey, Yin Yeng Lee, Ron C Anafi, John B Hogenesch. Sci Transl Med 2018
106
16

Central and peripheral circadian clocks in mammals.
Jennifer A Mohawk, Carla B Green, Joseph S Takahashi. Annu Rev Neurosci 2012
15

Reprogramming of the circadian clock by nutritional challenge.
Kristin L Eckel-Mahan, Vishal R Patel, Sara de Mateo, Ricardo Orozco-Solis, Nicholas J Ceglia, Saurabh Sahar, Sherry A Dilag-Penilla, Kenneth A Dyar, Pierre Baldi, Paolo Sassone-Corsi. Cell 2013
387
14

Crosstalk between metabolism and circadian clocks.
Hans Reinke, Gad Asher. Nat Rev Mol Cell Biol 2019
196
14

Generation of circadian rhythms in the suprachiasmatic nucleus.
Michael H Hastings, Elizabeth S Maywood, Marco Brancaccio. Nat Rev Neurosci 2018
270
14

The NAD+-dependent deacetylase SIRT1 modulates CLOCK-mediated chromatin remodeling and circadian control.
Yasukazu Nakahata, Milota Kaluzova, Benedetto Grimaldi, Saurabh Sahar, Jun Hirayama, Danica Chen, Leonard P Guarente, Paolo Sassone-Corsi. Cell 2008
948
13

Circadian time signatures of fitness and disease.
Joseph Bass, Mitchell A Lazar. Science 2016
283
13




Mop3 is an essential component of the master circadian pacemaker in mammals.
M K Bunger, L D Wilsbacher, S M Moran, C Clendenin, L A Radcliffe, J B Hogenesch, M C Simon, J S Takahashi, C A Bradfield. Cell 2000
12


CYCLOPS reveals human transcriptional rhythms in health and disease.
Ron C Anafi, Lauren J Francey, John B Hogenesch, Junhyong Kim. Proc Natl Acad Sci U S A 2017
104
11

Temperature as a universal resetting cue for mammalian circadian oscillators.
Ethan D Buhr, Seung-Hee Yoo, Joseph S Takahashi. Science 2010
529
11

Coordinated transcription of key pathways in the mouse by the circadian clock.
Satchidananda Panda, Marina P Antoch, Brooke H Miller, Andrew I Su, Andrew B Schook, Marty Straume, Peter G Schultz, Steve A Kay, Joseph S Takahashi, John B Hogenesch. Cell 2002
11

SIRT1 regulates circadian clock gene expression through PER2 deacetylation.
Gad Asher, David Gatfield, Markus Stratmann, Hans Reinke, Charna Dibner, Florian Kreppel, Raul Mostoslavsky, Frederick W Alt, Ueli Schibler. Cell 2008
913
11

Medicine in the Fourth Dimension.
Christopher R Cederroth, Urs Albrecht, Joseph Bass, Steven A Brown, Jonas Dyhrfjeld-Johnsen, Frederic Gachon, Carla B Green, Michael H Hastings, Charlotte Helfrich-Förster, John B Hogenesch,[...]. Cell Metab 2019
133
11

PERIOD2::LUCIFERASE real-time reporting of circadian dynamics reveals persistent circadian oscillations in mouse peripheral tissues.
Seung-Hee Yoo, Shin Yamazaki, Phillip L Lowrey, Kazuhiro Shimomura, Caroline H Ko, Ethan D Buhr, Sandra M Siepka, Hee-Kyung Hong, Won Jun Oh, Ook Joon Yoo,[...]. Proc Natl Acad Sci U S A 2004
11

Adverse metabolic and cardiovascular consequences of circadian misalignment.
Frank A J L Scheer, Michael F Hilton, Christos S Mantzoros, Steven A Shea. Proc Natl Acad Sci U S A 2009
10


Defining the Independence of the Liver Circadian Clock.
Kevin B Koronowski, Kenichiro Kinouchi, Patrick-Simon Welz, Jacob G Smith, Valentina M Zinna, Jiejun Shi, Muntaha Samad, Siwei Chen, Christophe N Magnan, Jason M Kinchen,[...]. Cell 2019
116
10

Clocking in to immunity.
Christoph Scheiermann, Julie Gibbs, Louise Ince, Andrew Loudon. Nat Rev Immunol 2018
196
10

Time-Restricted Feeding Prevents Obesity and Metabolic Syndrome in Mice Lacking a Circadian Clock.
Amandine Chaix, Terry Lin, Hiep D Le, Max W Chang, Satchidananda Panda. Cell Metab 2019
222
10

Early aging and age-related pathologies in mice deficient in BMAL1, the core componentof the circadian clock.
Roman V Kondratov, Anna A Kondratova, Victoria Y Gorbacheva, Olena V Vykhovanets, Marina P Antoch. Genes Dev 2006
720
10

Time-restricted feeding without reducing caloric intake prevents metabolic diseases in mice fed a high-fat diet.
Megumi Hatori, Christopher Vollmers, Amir Zarrinpar, Luciano DiTacchio, Eric A Bushong, Shubhroz Gill, Mathias Leblanc, Amandine Chaix, Matthew Joens, James A J Fitzpatrick,[...]. Cell Metab 2012
994
10

The Small Molecule Nobiletin Targets the Molecular Oscillator to Enhance Circadian Rhythms and Protect against Metabolic Syndrome.
Baokun He, Kazunari Nohara, Noheon Park, Yong-Sung Park, Bobby Guillory, Zhaoyang Zhao, Jose M Garcia, Nobuya Koike, Cheng Chi Lee, Joseph S Takahashi,[...]. Cell Metab 2016
239
10

Obesity and metabolic syndrome in circadian Clock mutant mice.
Fred W Turek, Corinne Joshu, Akira Kohsaka, Emily Lin, Ganka Ivanova, Erin McDearmon, Aaron Laposky, Sue Losee-Olson, Amy Easton, Dalan R Jensen,[...]. Science 2005
9

Training the Circadian Clock, Clocking the Drugs, and Drugging the Clock to Prevent, Manage, and Treat Chronic Diseases.
Gabriele Sulli, Emily N C Manoogian, Pam R Taub, Satchidananda Panda. Trends Pharmacol Sci 2018
91
9

Molecular architecture of the mammalian circadian clock.
Carrie L Partch, Carla B Green, Joseph S Takahashi. Trends Cell Biol 2014
729
9

Guidelines for Genome-Scale Analysis of Biological Rhythms.
Michael E Hughes, Katherine C Abruzzi, Ravi Allada, Ron Anafi, Alaaddin Bulak Arpat, Gad Asher, Pierre Baldi, Charissa de Bekker, Deborah Bell-Pedersen, Justin Blau,[...]. J Biol Rhythms 2017
109
9

MetaCycle: an integrated R package to evaluate periodicity in large scale data.
Gang Wu, Ron C Anafi, Michael E Hughes, Karl Kornacker, John B Hogenesch. Bioinformatics 2016
193
9

Circadian physiology of metabolism.
Satchidananda Panda. Science 2016
405
9

Transplanted suprachiasmatic nucleus determines circadian period.
M R Ralph, R G Foster, F C Davis, M Menaker. Science 1990
9

Insulin/IGF-1 Drives PERIOD Synthesis to Entrain Circadian Rhythms with Feeding Time.
Priya Crosby, Ryan Hamnett, Marrit Putker, Nathaniel P Hoyle, Martin Reed, Carolyn J Karam, Elizabeth S Maywood, Alessandra Stangherlin, Johanna E Chesham, Edward A Hayter,[...]. Cell 2019
116
9

Early Time-Restricted Feeding Improves Insulin Sensitivity, Blood Pressure, and Oxidative Stress Even without Weight Loss in Men with Prediabetes.
Elizabeth F Sutton, Robbie Beyl, Kate S Early, William T Cefalu, Eric Ravussin, Courtney M Peterson. Cell Metab 2018
439
9

Resetting of circadian time in peripheral tissues by glucocorticoid signaling.
A Balsalobre, S A Brown, L Marcacci, F Tronche, C Kellendonk, H M Reichardt, G Schütz, U Schibler. Science 2000
9

Development and Therapeutic Potential of Small-Molecule Modulators of Circadian Systems.
Zheng Chen, Seung-Hee Yoo, Joseph S Takahashi. Annu Rev Pharmacol Toxicol 2018
77
11

Regulation of circadian behaviour and metabolism by REV-ERB-α and REV-ERB-β.
Han Cho, Xuan Zhao, Megumi Hatori, Ruth T Yu, Grant D Barish, Michael T Lam, Ling-Wa Chong, Luciano DiTacchio, Annette R Atkins, Christopher K Glass,[...]. Nature 2012
646
9

The orphan nuclear receptor REV-ERBalpha controls circadian transcription within the positive limb of the mammalian circadian oscillator.
Nicolas Preitner, Francesca Damiola, Luis Lopez-Molina, Joszef Zakany, Denis Duboule, Urs Albrecht, Ueli Schibler. Cell 2002
9



Circadian clock feedback cycle through NAMPT-mediated NAD+ biosynthesis.
Kathryn Moynihan Ramsey, Jun Yoshino, Cynthia S Brace, Dana Abrassart, Yumiko Kobayashi, Biliana Marcheva, Hee-Kyung Hong, Jason L Chong, Ethan D Buhr, Choogon Lee,[...]. Science 2009
750
8


Entrainment of the circadian clock in the liver by feeding.
K A Stokkan, S Yamazaki, H Tei, Y Sakaki, M Menaker. Science 2001
8

Circadian patterns of gene expression in the human brain and disruption in major depressive disorder.
Jun Z Li, Blynn G Bunney, Fan Meng, Megan H Hagenauer, David M Walsh, Marquis P Vawter, Simon J Evans, Prabhakara V Choudary, Preston Cartagena, Jack D Barchas,[...]. Proc Natl Acad Sci U S A 2013
322
8

Cryptochromes mediate rhythmic repression of the glucocorticoid receptor.
Katja A Lamia, Stephanie J Papp, Ruth T Yu, Grant D Barish, N Henriette Uhlenhaut, Johan W Jonker, Michael Downes, Ronald M Evans. Nature 2011
357
8

Circadian gene Bmal1 regulates diurnal oscillations of Ly6C(hi) inflammatory monocytes.
Khoa D Nguyen, Sarah J Fentress, Yifu Qiu, Karen Yun, Jeffery S Cox, Ajay Chawla. Science 2013
375
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.