A citation-based method for searching scientific literature

Janice S Chen, Enbo Ma, Lucas B Harrington, Maria Da Costa, Xinran Tian, Joel M Palefsky, Jennifer A Doudna. Science 2018
Times Cited: 1122







List of co-cited articles
686 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Nucleic acid detection with CRISPR-Cas13a/C2c2.
Jonathan S Gootenberg, Omar O Abudayyeh, Jeong Wook Lee, Patrick Essletzbichler, Aaron J Dy, Julia Joung, Vanessa Verdine, Nina Donghia, Nichole M Daringer, Catherine A Freije,[...]. Science 2017
62

Multiplexed and portable nucleic acid detection platform with Cas13, Cas12a, and Csm6.
Jonathan S Gootenberg, Omar O Abudayyeh, Max J Kellner, Julia Joung, James J Collins, Feng Zhang. Science 2018
868
43

CRISPR-Cas12-based detection of SARS-CoV-2.
James P Broughton, Xianding Deng, Guixia Yu, Clare L Fasching, Venice Servellita, Jasmeet Singh, Xin Miao, Jessica A Streithorst, Andrea Granados, Alicia Sotomayor-Gonzalez,[...]. Nat Biotechnol 2020
42

CRISPR-Cas12a-assisted nucleic acid detection.
Shi-Yuan Li, Qiu-Xiang Cheng, Jing-Man Wang, Xiao-Yan Li, Zi-Long Zhang, Song Gao, Rui-Bing Cao, Guo-Ping Zhao, Jin Wang. Cell Discov 2018
380
33

Field-deployable viral diagnostics using CRISPR-Cas13.
Cameron Myhrvold, Catherine A Freije, Jonathan S Gootenberg, Omar O Abudayyeh, Hayden C Metsky, Ann F Durbin, Max J Kellner, Amanda L Tan, Lauren M Paul, Leda A Parham,[...]. Science 2018
558
29

SHERLOCK: nucleic acid detection with CRISPR nucleases.
Max J Kellner, Jeremy G Koob, Jonathan S Gootenberg, Omar O Abudayyeh, Feng Zhang. Nat Protoc 2019
416
29

Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system.
Bernd Zetsche, Jonathan S Gootenberg, Omar O Abudayyeh, Ian M Slaymaker, Kira S Makarova, Patrick Essletzbichler, Sara E Volz, Julia Joung, John van der Oost, Aviv Regev,[...]. Cell 2015
26

Programmed DNA destruction by miniature CRISPR-Cas14 enzymes.
Lucas B Harrington, David Burstein, Janice S Chen, David Paez-Espino, Enbo Ma, Isaac P Witte, Joshua C Cofsky, Nikos C Kyrpides, Jillian F Banfield, Jennifer A Doudna. Science 2018
383
25

CRISPR-Cas12a has both cis- and trans-cleavage activities on single-stranded DNA.
Shi-Yuan Li, Qiu-Xiang Cheng, Jia-Kun Liu, Xiao-Qun Nie, Guo-Ping Zhao, Jin Wang. Cell Res 2018
307
25

HOLMESv2: A CRISPR-Cas12b-Assisted Platform for Nucleic Acid Detection and DNA Methylation Quantitation.
Linxian Li, Shiyuan Li, Na Wu, Jiacheng Wu, Gang Wang, Guoping Zhao, Jin Wang. ACS Synth Biol 2019
189
23

A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.
Martin Jinek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer A Doudna, Emmanuelle Charpentier. Science 2012
22

Functional DNA Regulated CRISPR-Cas12a Sensors for Point-of-Care Diagnostics of Non-Nucleic-Acid Targets.
Ying Xiong, Jingjing Zhang, Zhenglin Yang, Quanbing Mou, Yuan Ma, Yonghua Xiong, Yi Lu. J Am Chem Soc 2020
182
20

C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector.
Omar O Abudayyeh, Jonathan S Gootenberg, Silvana Konermann, Julia Joung, Ian M Slaymaker, David B T Cox, Sergey Shmakov, Kira S Makarova, Ekaterina Semenova, Leonid Minakhin,[...]. Science 2016
980
19

Detection of SARS-CoV-2 with SHERLOCK One-Pot Testing.
Julia Joung, Alim Ladha, Makoto Saito, Nam-Gyun Kim, Ann E Woolley, Michael Segel, Robert P J Barretto, Amardeep Ranu, Rhiannon K Macrae, Guilhem Faure,[...]. N Engl J Med 2020
277
18

Exploring the Trans-Cleavage Activity of CRISPR-Cas12a (cpf1) for the Development of a Universal Electrochemical Biosensor.
Yifan Dai, Rodrigo A Somoza, Liu Wang, Jean F Welter, Yan Li, Arnold I Caplan, Chung Chiun Liu. Angew Chem Int Ed Engl 2019
191
17

Amplification-free detection of SARS-CoV-2 with CRISPR-Cas13a and mobile phone microscopy.
Parinaz Fozouni, Sungmin Son, María Díaz de León Derby, Gavin J Knott, Carley N Gray, Michael V D'Ambrosio, Chunyu Zhao, Neil A Switz, G Renuka Kumar, Stephanie I Stephens,[...]. Cell 2021
274
17

Cas12aVDet: A CRISPR/Cas12a-Based Platform for Rapid and Visual Nucleic Acid Detection.
Bei Wang, Rui Wang, Daqi Wang, Jian Wu, Jixi Li, Jin Wang, Huihui Liu, Yongming Wang. Anal Chem 2019
133
17

Loop-mediated isothermal amplification of DNA.
T Notomi, H Okayama, H Masubuchi, T Yonekawa, K Watanabe, N Amino, T Hase. Nucleic Acids Res 2000
16

Multiplex genome engineering using CRISPR/Cas systems.
Le Cong, F Ann Ran, David Cox, Shuailiang Lin, Robert Barretto, Naomi Habib, Patrick D Hsu, Xuebing Wu, Wenyan Jiang, Luciano A Marraffini,[...]. Science 2013
16

Rapid, Low-Cost Detection of Zika Virus Using Programmable Biomolecular Components.
Keith Pardee, Alexander A Green, Melissa K Takahashi, Dana Braff, Guillaume Lambert, Jeong Wook Lee, Tom Ferrante, Duo Ma, Nina Donghia, Melina Fan,[...]. Cell 2016
602
16

opvCRISPR: One-pot visual RT-LAMP-CRISPR platform for SARS-cov-2 detection.
Rui Wang, Chunyan Qian, Yanan Pang, Miaomiao Li, Yu Yang, Haijing Ma, Manying Zhao, Feng Qian, Hang Yu, Zhenping Liu,[...]. Biosens Bioelectron 2021
100
16

CDetection: CRISPR-Cas12b-based DNA detection with sub-attomolar sensitivity and single-base specificity.
Fei Teng, Lu Guo, Tongtong Cui, Xin-Ge Wang, Kai Xu, Qingqin Gao, Qi Zhou, Wei Li. Genome Biol 2019
116
16

CRISPR/Cas Systems towards Next-Generation Biosensing.
Yi Li, Shiyuan Li, Jin Wang, Guozhen Liu. Trends Biotechnol 2019
313
16

Massively multiplexed nucleic acid detection with Cas13.
Cheri M Ackerman, Cameron Myhrvold, Sri Gowtham Thakku, Catherine A Freije, Hayden C Metsky, David K Yang, Simon H Ye, Chloe K Boehm, Tinna-Sólveig F Kosoko-Thoroddsen, Jared Kehe,[...]. Nature 2020
227
15

Ultrasensitive and visual detection of SARS-CoV-2 using all-in-one dual CRISPR-Cas12a assay.
Xiong Ding, Kun Yin, Ziyue Li, Rajesh V Lalla, Enrique Ballesteros, Maroun M Sfeir, Changchun Liu. Nat Commun 2020
249
14

A CRISPR-Cas9-triggered strand displacement amplification method for ultrasensitive DNA detection.
Wenhua Zhou, Li Hu, Liming Ying, Zhen Zhao, Paul K Chu, Xue-Feng Yu. Nat Commun 2018
150
14


A CRISPR-Cas12a-derived biosensing platform for the highly sensitive detection of diverse small molecules.
Mindong Liang, Zilong Li, Weishan Wang, Jiakun Liu, Leshi Liu, Guoliang Zhu, Loganathan Karthik, Man Wang, Ke-Feng Wang, Zhong Wang,[...]. Nat Commun 2019
146
13

Streamlined inactivation, amplification, and Cas13-based detection of SARS-CoV-2.
Jon Arizti-Sanz, Catherine A Freije, Alexandra C Stanton, Brittany A Petros, Chloe K Boehm, Sameed Siddiqui, Bennett M Shaw, Gordon Adams, Tinna-Solveig F Kosoko-Thoroddsen, Molly E Kemball,[...]. Nat Commun 2020
149
13

CRISPR-based diagnostics.
Michael M Kaminski, Omar O Abudayyeh, Jonathan S Gootenberg, Feng Zhang, James J Collins. Nat Biomed Eng 2021
120
13

iSCAN: An RT-LAMP-coupled CRISPR-Cas12 module for rapid, sensitive detection of SARS-CoV-2.
Zahir Ali, Rashid Aman, Ahmed Mahas, Gundra Sivakrishna Rao, Muhammad Tehseen, Tin Marsic, Rahul Salunke, Amit K Subudhi, Sharif M Hala, Samir M Hamdan,[...]. Virus Res 2020
123
13

CRISPR provides acquired resistance against viruses in prokaryotes.
Rodolphe Barrangou, Christophe Fremaux, Hélène Deveau, Melissa Richards, Patrick Boyaval, Sylvain Moineau, Dennis A Romero, Philippe Horvath. Science 2007
13

Ultra-sensitive and high-throughput CRISPR-p owered COVID-19 diagnosis.
Zhen Huang, Di Tian, Yang Liu, Zhen Lin, Christopher J Lyon, Weihua Lai, Dahlene Fusco, Arnaud Drouin, Xiaoming Yin, Tony Hu,[...]. Biosens Bioelectron 2020
189
12

Point-of-care CRISPR/Cas nucleic acid detection: Recent advances, challenges and opportunities.
Jeanne E van Dongen, Johanna T W Berendsen, Renske D M Steenbergen, Rob M F Wolthuis, Jan C T Eijkel, Loes I Segerink. Biosens Bioelectron 2020
104
12

Evolutionary classification of CRISPR-Cas systems: a burst of class 2 and derived variants.
Kira S Makarova, Yuri I Wolf, Jaime Iranzo, Sergey A Shmakov, Omer S Alkhnbashi, Stan J J Brouns, Emmanuelle Charpentier, David Cheng, Daniel H Haft, Philippe Horvath,[...]. Nat Rev Microbiol 2020
636
11

Electric field-driven microfluidics for rapid CRISPR-based diagnostics and its application to detection of SARS-CoV-2.
Ashwin Ramachandran, Diego A Huyke, Eesha Sharma, Malaya K Sahoo, ChunHong Huang, Niaz Banaei, Benjamin A Pinsky, Juan G Santiago. Proc Natl Acad Sci U S A 2020
118
10

Clinical validation of a Cas13-based assay for the detection of SARS-CoV-2 RNA.
Maturada Patchsung, Krittapas Jantarug, Archiraya Pattama, Kanokpol Aphicho, Surased Suraritdechachai, Piyachat Meesawat, Khomkrit Sappakhaw, Nattawat Leelahakorn, Theerawat Ruenkam, Thanakrit Wongsatit,[...]. Nat Biomed Eng 2020
224
10

An engineered CRISPR-Cas12a variant and DNA-RNA hybrid guides enable robust and rapid COVID-19 testing.
Kean Hean Ooi, Mengying Mandy Liu, Jie Wen Douglas Tay, Seok Yee Teo, Pornchai Kaewsapsak, Shengyang Jin, Chun Kiat Lee, Jingwen Hou, Sebastian Maurer-Stroh, Weisi Lin,[...]. Nat Commun 2021
50
20

CRISPR/cas systems redefine nucleic acid detection: Principles and methods.
Meng Wang, Rui Zhang, Jinming Li. Biosens Bioelectron 2020
65
15

Crystal structure of Cas9 in complex with guide RNA and target DNA.
Hiroshi Nishimasu, F Ann Ran, Patrick D Hsu, Silvana Konermann, Soraya I Shehata, Naoshi Dohmae, Ryuichiro Ishitani, Feng Zhang, Osamu Nureki. Cell 2014
10

Structural Basis for the Canonical and Non-canonical PAM Recognition by CRISPR-Cpf1.
Takashi Yamano, Bernd Zetsche, Ryuichiro Ishitani, Feng Zhang, Hiroshi Nishimasu, Osamu Nureki. Mol Cell 2017
107
9

Diversity and evolution of class 2 CRISPR-Cas systems.
Sergey Shmakov, Aaron Smargon, David Scott, David Cox, Neena Pyzocha, Winston Yan, Omar O Abudayyeh, Jonathan S Gootenberg, Kira S Makarova, Yuri I Wolf,[...]. Nat Rev Microbiol 2017
485
9

Detection of unamplified target genes via CRISPR-Cas9 immobilized on a graphene field-effect transistor.
Reza Hajian, Sarah Balderston, Thanhtra Tran, Tara deBoer, Jessy Etienne, Mandeep Sandhu, Noreen A Wauford, Jing-Yi Chung, Jolie Nokes, Mitre Athaiya,[...]. Nat Biomed Eng 2019
212
9

Genome-wide analysis reveals specificities of Cpf1 endonucleases in human cells.
Daesik Kim, Jungeun Kim, Junho K Hur, Kyung Wook Been, Sun-Heui Yoon, Jin-Soo Kim. Nat Biotechnol 2016
393
9

Programmable Inhibition and Detection of RNA Viruses Using Cas13.
Catherine A Freije, Cameron Myhrvold, Chloe K Boehm, Aaron E Lin, Nicole L Welch, Amber Carter, Hayden C Metsky, Cynthia Y Luo, Omar O Abudayyeh, Jonathan S Gootenberg,[...]. Mol Cell 2019
180
9

High-fidelity CRISPR-Cas9 nucleases with no detectable genome-wide off-target effects.
Benjamin P Kleinstiver, Vikram Pattanayak, Michelle S Prew, Shengdar Q Tsai, Nhu T Nguyen, Zongli Zheng, J Keith Joung. Nature 2016
9



DNA detection using recombination proteins.
Olaf Piepenburg, Colin H Williams, Derek L Stemple, Niall A Armes. PLoS Biol 2006
9



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.