A citation-based method for searching scientific literature

Sylvia de Pater, Bart J P M Klemann, Paul J J Hooykaas. Sci Rep 2018
Times Cited: 28







List of co-cited articles
518 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


DNA replicons for plant genome engineering.
Nicholas J Baltes, Javier Gil-Humanes, Tomas Cermak, Paul A Atkins, Daniel F Voytas. Plant Cell 2014
269
71

High-efficiency gene targeting in hexaploid wheat using DNA replicons and CRISPR/Cas9.
Javier Gil-Humanes, Yanpeng Wang, Zhen Liang, Qiwei Shan, Carmen V Ozuna, Susana Sánchez-León, Nicholas J Baltes, Colby Starker, Francisco Barro, Caixia Gao,[...]. Plant J 2017
173
60


In planta gene targeting.
Friedrich Fauser, Nadine Roth, Michael Pacher, Gabriele Ilg, Rocío Sánchez-Fernández, Christian Biesgen, Holger Puchta. Proc Natl Acad Sci U S A 2012
127
57

High-frequency, precise modification of the tomato genome.
Tomáš Čermák, Nicholas J Baltes, Radim Čegan, Yong Zhang, Daniel F Voytas. Genome Biol 2015
278
57

Homology-Directed Repair of a Defective Glabrous Gene in Arabidopsis With Cas9-Based Gene Targeting.
Florian Hahn, Marion Eisenhut, Otho Mantegazza, Andreas P M Weber. Front Plant Sci 2018
38
57

Efficient in planta gene targeting in tomato using geminiviral replicons and the CRISPR/Cas9 system.
Tal Dahan-Meir, Shdema Filler-Hayut, Cathy Melamed-Bessudo, Samuel Bocobza, Henryk Czosnek, Asaph Aharoni, Avraham A Levy. Plant J 2018
101
53

A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.
Martin Jinek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer A Doudna, Emmanuelle Charpentier. Science 2012
53

Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system.
Bernd Zetsche, Jonathan S Gootenberg, Omar O Abudayyeh, Ian M Slaymaker, Kira S Makarova, Patrick Essletzbichler, Sara E Volz, Julia Joung, John van der Oost, Aviv Regev,[...]. Cell 2015
53

Gene Targeting by Homology-Directed Repair in Rice Using a Geminivirus-Based CRISPR/Cas9 System.
Mugui Wang, Yuming Lu, José Ramón Botella, Yanfei Mao, Kai Hua, Jian-Kang Zhu. Mol Plant 2017
107
50

Precise insertion and guided editing of higher plant genomes using Cpf1 CRISPR nucleases.
Matthew B Begemann, Benjamin N Gray, Emma January, Gina C Gordon, Yonghua He, Haijun Liu, Xingrong Wu, Thomas P Brutnell, Todd C Mockler, Mohammed Oufattole. Sci Rep 2017
100
50

CRISPR/Cas9-mediated gene targeting in Arabidopsis using sequential transformation.
Daisuke Miki, Wenxin Zhang, Wenjie Zeng, Zhengyan Feng, Jian-Kang Zhu. Nat Commun 2018
108
50

Search-and-replace genome editing without double-strand breaks or donor DNA.
Andrew V Anzalone, Peyton B Randolph, Jessie R Davis, Alexander A Sousa, Luke W Koblan, Jonathan M Levy, Peter J Chen, Christopher Wilson, Gregory A Newby, Aditya Raguram,[...]. Nature 2019
46

Geminivirus-Mediated Genome Editing in Potato (Solanum tuberosum L.) Using Sequence-Specific Nucleases.
Nathaniel M Butler, Nicholas J Baltes, Daniel F Voytas, David S Douches. Front Plant Sci 2016
122
42

Targeted Mutagenesis, Precise Gene Editing, and Site-Specific Gene Insertion in Maize Using Cas9 and Guide RNA.
Sergei Svitashev, Joshua K Young, Christine Schwartz, Huirong Gao, S Carl Falco, A Mark Cigan. Plant Physiol 2015
322
42

Biallelic Gene Targeting in Rice.
Masaki Endo, Masafumi Mikami, Seiichi Toki. Plant Physiol 2016
95
42




Increasing frequencies of site-specific mutagenesis and gene targeting in Arabidopsis by manipulating DNA repair pathways.
Yiping Qi, Yong Zhang, Feng Zhang, Joshua A Baller, Spencer C Cleland, Yungil Ryu, Colby G Starker, Daniel F Voytas. Genome Res 2013
105
39


Localized egg-cell expression of effector proteins for targeted modification of the Arabidopsis genome.
Liron Even-Faitelson, Aviva Samach, Cathy Melamed-Bessudo, Naomi Avivi-Ragolsky, Avraham A Levy. Plant J 2011
44
35

ZFN, TALEN and CRISPR-Cas9 mediated homology directed gene insertion in Arabidopsis: A disconnect between somatic and germinal cells.
Qiwei Shan, Nicholas J Baltes, Paul Atkins, Elida R Kirkland, Yong Zhang, Joshua A Baller, Levi G Lowder, Aimee A Malzahn, John C Haugner, Burckhard Seelig,[...]. J Genet Genomics 2018
16
62

Precise gene replacement in rice by RNA transcript-templated homologous recombination.
Shaoya Li, Jingying Li, Yubing He, Meilian Xu, Jiahui Zhang, Wenming Du, Yunde Zhao, Lanqin Xia. Nat Biotechnol 2019
61
35

Highly efficient homology-directed repair using CRISPR/Cpf1-geminiviral replicon in tomato.
Tien Van Vu, Velu Sivankalyani, Eun-Jung Kim, Duong Thi Hai Doan, Mil Thi Tran, Jihae Kim, Yeon Woo Sung, Minwoo Park, Yang Jae Kang, Jae-Yean Kim. Plant Biotechnol J 2020
61
35

Targeted genome modification of crop plants using a CRISPR-Cas system.
Qiwei Shan, Yanpeng Wang, Jun Li, Yi Zhang, Kunling Chen, Zhen Liang, Kang Zhang, Jinxing Liu, Jianzhong Jeff Xi, Jin-Long Qiu,[...]. Nat Biotechnol 2013
947
32

High-frequency gene targeting in Arabidopsis plants expressing the yeast RAD54 gene.
Hezi Shaked, Cathy Melamed-Bessudo, Avraham A Levy. Proc Natl Acad Sci U S A 2005
93
32

Engineering Herbicide-Resistant Rice Plants through CRISPR/Cas9-Mediated Homologous Recombination of Acetolactate Synthase.
Yongwei Sun, Xin Zhang, Chuanyin Wu, Yubing He, Youzhi Ma, Han Hou, Xiuping Guo, Wenming Du, Yunde Zhao, Lanqin Xia. Mol Plant 2016
199
32

Gene targeting in plants.
J Paszkowski, M Baur, A Bogucki, I Potrykus. EMBO J 1988
189
32

Synthesis-dependent repair of Cpf1-induced double strand DNA breaks enables targeted gene replacement in rice.
Shaoya Li, Jingying Li, Jiahui Zhang, Wenming Du, Jindong Fu, Suhas Sutar, Yunde Zhao, Lanqin Xia. J Exp Bot 2018
42
32


A CRISPR-Cpf1 system for efficient genome editing and transcriptional repression in plants.
Xu Tang, Levi G Lowder, Tao Zhang, Aimee A Malzahn, Xuelian Zheng, Daniel F Voytas, Zhaohui Zhong, Yiyi Chen, Qiurong Ren, Qian Li,[...]. Nat Plants 2017
262
32

Prime genome editing in rice and wheat.
Qiupeng Lin, Yuan Zong, Chenxiao Xue, Shengxing Wang, Shuai Jin, Zixu Zhu, Yanpeng Wang, Andrew V Anzalone, Aditya Raguram, Jordan L Doman,[...]. Nat Biotechnol 2020
272
32


Targeted recombination between homologous chromosomes for precise breeding in tomato.
Shdema Filler Hayut, Cathy Melamed Bessudo, Avraham A Levy. Nat Commun 2017
87
28

Allele exchange at the EPSPS locus confers glyphosate tolerance in cassava.
Aaron W Hummel, Raj Deepika Chauhan, Tomas Cermak, Andrew M Mutka, Anupama Vijayaraghavan, Adam Boyher, Colby G Starker, Rebecca Bart, Daniel F Voytas, Nigel J Taylor. Plant Biotechnol J 2018
57
28

Multiplex genome engineering using CRISPR/Cas systems.
Le Cong, F Ann Ran, David Cox, Shuailiang Lin, Robert Barretto, Naomi Habib, Patrick D Hsu, Xuebing Wu, Wenyan Jiang, Luciano A Marraffini,[...]. Science 2013
28


ARGOS8 variants generated by CRISPR-Cas9 improve maize grain yield under field drought stress conditions.
Jinrui Shi, Huirong Gao, Hongyu Wang, H Renee Lafitte, Rayeann L Archibald, Meizhu Yang, Salim M Hakimi, Hua Mo, Jeffrey E Habben. Plant Biotechnol J 2017
308
28

Development of Plant Prime-Editing Systems for Precise Genome Editing.
Rongfang Xu, Juan Li, Xiaoshuang Liu, Tiaofeng Shan, Ruiying Qin, Pengcheng Wei. Plant Commun 2020
69
28

Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage.
Alexis C Komor, Yongjoo B Kim, Michael S Packer, John A Zuris, David R Liu. Nature 2016
28

CRISPR-Cas12a enables efficient biallelic gene targeting in rice.
Shaoya Li, Yingxiao Zhang, Lanqin Xia, Yiping Qi. Plant Biotechnol J 2020
28
28

Application of CRISPR-Cas12a temperature sensitivity for improved genome editing in rice, maize, and Arabidopsis.
Aimee A Malzahn, Xu Tang, Keunsub Lee, Qiurong Ren, Simon Sretenovic, Yingxiao Zhang, Hongqiao Chen, Minjeong Kang, Yu Bao, Xuelian Zheng,[...]. BMC Biol 2019
94
28

Precise Modifications of Both Exogenous and Endogenous Genes in Rice by Prime Editing.
Huiyuan Li, Jingying Li, Jilin Chen, Lei Yan, Lanqin Xia. Mol Plant 2020
79
28

Gene replacements and insertions in rice by intron targeting using CRISPR-Cas9.
Jun Li, Xiangbing Meng, Yuan Zong, Kunling Chen, Huawei Zhang, Jinxing Liu, Jiayang Li, Caixia Gao. Nat Plants 2016
159
25

Homology-based double-strand break-induced genome engineering in plants.
Jeannette Steinert, Simon Schiml, Holger Puchta. Plant Cell Rep 2016
54
25

Genome editing in maize directed by CRISPR-Cas9 ribonucleoprotein complexes.
Sergei Svitashev, Christine Schwartz, Brian Lenderts, Joshua K Young, A Mark Cigan. Nat Commun 2016
327
25

Gene targeting in plants: 25 years later.
Holger Puchta, Friedrich Fauser. Int J Dev Biol 2013
82
25

Egg cell-specific promoter-controlled CRISPR/Cas9 efficiently generates homozygous mutants for multiple target genes in Arabidopsis in a single generation.
Zhi-Ping Wang, Hui-Li Xing, Li Dong, Hai-Yan Zhang, Chun-Yan Han, Xue-Chen Wang, Qi-Jun Chen. Genome Biol 2015
495
25

Efficient allelic replacement in rice by gene editing: A case study of the NRT1.1B gene.
Jingying Li, Xin Zhang, Yongwei Sun, Jiahui Zhang, Wenming Du, Xiuping Guo, Shaoya Li, Yunde Zhao, Lanqin Xia. J Integr Plant Biol 2018
41
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.