A citation-based method for searching scientific literature

Gordon J Berman. BMC Biol 2018
Times Cited: 44







List of co-cited articles
241 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Mapping Sub-Second Structure in Mouse Behavior.
Alexander B Wiltschko, Matthew J Johnson, Giuliano Iurilli, Ralph E Peterson, Jesse M Katon, Stan L Pashkovski, Victoria E Abraira, Ryan P Adams, Sandeep Robert Datta. Neuron 2015
199
56

Mapping the stereotyped behaviour of freely moving fruit flies.
Gordon J Berman, Daniel M Choi, William Bialek, Joshua W Shaevitz. J R Soc Interface 2014
156
54

DeepLabCut: markerless pose estimation of user-defined body parts with deep learning.
Alexander Mathis, Pranav Mamidanna, Kevin M Cury, Taiga Abe, Venkatesh N Murthy, Mackenzie Weygandt Mathis, Matthias Bethge. Nat Neurosci 2018
460
47

Fast animal pose estimation using deep neural networks.
Talmo D Pereira, Diego E Aldarondo, Lindsay Willmore, Mikhail Kislin, Samuel S-H Wang, Mala Murthy, Joshua W Shaevitz. Nat Methods 2019
107
47

Predictability and hierarchy in Drosophila behavior.
Gordon J Berman, William Bialek, Joshua W Shaevitz. Proc Natl Acad Sci U S A 2016
59
43

Toward a science of computational ethology.
David J Anderson, Pietro Perona. Neuron 2014
146
40

JAABA: interactive machine learning for automatic annotation of animal behavior.
Mayank Kabra, Alice A Robie, Marta Rivera-Alba, Steven Branson, Kristin Branson. Nat Methods 2013
196
38

Neuroscience Needs Behavior: Correcting a Reductionist Bias.
John W Krakauer, Asif A Ghazanfar, Alex Gomez-Marin, Malcolm A MacIver, David Poeppel. Neuron 2017
356
34

The Striatum Organizes 3D Behavior via Moment-to-Moment Action Selection.
Jeffrey E Markowitz, Winthrop F Gillis, Celia C Beron, Shay Q Neufeld, Keiramarie Robertson, Neha D Bhagat, Ralph E Peterson, Emalee Peterson, Minsuk Hyun, Scott W Linderman,[...]. Cell 2018
105
31

Dimensionality and dynamics in the behavior of C. elegans.
Greg J Stephens, Bethany Johnson-Kerner, William Bialek, William S Ryu. PLoS Comput Biol 2008
219
29

DeepPoseKit, a software toolkit for fast and robust animal pose estimation using deep learning.
Jacob M Graving, Daniel Chae, Hemal Naik, Liang Li, Benjamin Koger, Blair R Costelloe, Iain D Couzin. Elife 2019
70
27

Computational Analysis of Behavior.
S E Roian Egnor, Kristin Branson. Annu Rev Neurosci 2016
59
25

Computational Neuroethology: A Call to Action.
Sandeep Robert Datta, David J Anderson, Kristin Branson, Pietro Perona, Andrew Leifer. Neuron 2019
69
25

Big behavioral data: psychology, ethology and the foundations of neuroscience.
Alex Gomez-Marin, Joseph J Paton, Adam R Kampff, Rui M Costa, Zachary F Mainen. Nat Neurosci 2014
94
22

High-throughput ethomics in large groups of Drosophila.
Kristin Branson, Alice A Robie, John Bender, Pietro Perona, Michael H Dickinson. Nat Methods 2009
346
20

Discovery of brainwide neural-behavioral maps via multiscale unsupervised structure learning.
Joshua T Vogelstein, Youngser Park, Tomoko Ohyama, Rex A Kerr, James W Truman, Carey E Priebe, Marta Zlatic. Science 2014
114
20

Mapping the Neural Substrates of Behavior.
Alice A Robie, Jonathan Hirokawa, Austin W Edwards, Lowell A Umayam, Allen Lee, Mary L Phillips, Gwyneth M Card, Wyatt Korff, Gerald M Rubin, Julie H Simpson,[...]. Cell 2017
89
20

Systematic exploration of unsupervised methods for mapping behavior.
Jeremy G Todd, Jamey S Kain, Benjamin L de Bivort. Phys Biol 2017
29
31

An unsupervised method for quantifying the behavior of paired animals.
Ugne Klibaite, Gordon J Berman, Jessica Cande, David L Stern, Joshua W Shaevitz. Phys Biol 2017
24
37

Structure of the Zebrafish Locomotor Repertoire Revealed with Unsupervised Behavioral Clustering.
João C Marques, Simone Lackner, Rita Félix, Michael B Orger. Curr Biol 2018
69
20

Automated measurement of mouse social behaviors using depth sensing, video tracking, and machine learning.
Weizhe Hong, Ann Kennedy, Xavier P Burgos-Artizzu, Moriel Zelikowsky, Santiago G Navonne, Pietro Perona, David J Anderson. Proc Natl Acad Sci U S A 2015
100
20

Machine vision methods for analyzing social interactions.
Alice A Robie, Kelly M Seagraves, S E Roian Egnor, Kristin Branson. J Exp Biol 2017
47
18

Using DeepLabCut for 3D markerless pose estimation across species and behaviors.
Tanmay Nath, Alexander Mathis, An Chi Chen, Amir Patel, Matthias Bethge, Mackenzie Weygandt Mathis. Nat Protoc 2019
157
18

DeepFly3D, a deep learning-based approach for 3D limb and appendage tracking in tethered, adult Drosophila.
Semih Günel, Helge Rhodin, Daniel Morales, João Campagnolo, Pavan Ramdya, Pascal Fua. Elife 2019
27
29

A dictionary of behavioral motifs reveals clusters of genes affecting Caenorhabditis elegans locomotion.
André E X Brown, Eviatar I Yemini, Laura J Grundy, Tadas Jucikas, William R Schafer. Proc Natl Acad Sci U S A 2013
100
15

Unsupervised identification of the internal states that shape natural behavior.
Adam J Calhoun, Jonathan W Pillow, Mala Murthy. Nat Neurosci 2019
25
28

A quantitative framework for whole-body coordination reveals specific deficits in freely walking ataxic mice.
Ana S Machado, Dana M Darmohray, João Fayad, Hugo G Marques, Megan R Carey. Elife 2015
70
13

Automated image-based tracking and its application in ecology.
Anthony I Dell, John A Bender, Kristin Branson, Iain D Couzin, Gonzalo G de Polavieja, Lucas P J J Noldus, Alfonso Pérez-Escudero, Pietro Perona, Andrew D Straw, Martin Wikelski,[...]. Trends Ecol Evol 2014
132
13

idTracker: tracking individuals in a group by automatic identification of unmarked animals.
Alfonso Pérez-Escudero, Julián Vicente-Page, Robert C Hinz, Sara Arganda, Gonzalo G de Polavieja. Nat Methods 2014
242
13

Optogenetic dissection of descending behavioral control in Drosophila.
Jessica Cande, Shigehiro Namiki, Jirui Qiu, Wyatt Korff, Gwyneth M Card, Joshua W Shaevitz, David L Stern, Gordon J Berman. Elife 2018
44
13

Automated home-cage behavioural phenotyping of mice.
Hueihan Jhuang, Estibaliz Garrote, Jim Mutch, Xinlin Yu, Vinita Khilnani, Tomaso Poggio, Andrew D Steele, Thomas Serre. Nat Commun 2010
104
13

Dynamic sensory cues shape song structure in Drosophila.
Philip Coen, Jan Clemens, Andrew J Weinstein, Diego A Pacheco, Yi Deng, Mala Murthy. Nature 2014
68
13

Discovery of a New Song Mode in Drosophila Reveals Hidden Structure in the Sensory and Neural Drivers of Behavior.
Jan Clemens, Philip Coen, Frederic A Roemschied, Talmo D Pereira, David Mazumder, Diego E Aldarondo, Diego A Pacheco, Mala Murthy. Curr Biol 2018
25
24

Temporal processing and context dependency in Caenorhabditis elegans response to mechanosensation.
Mochi Liu, Anuj K Sharma, Joshua W Shaevitz, Andrew M Leifer. Elife 2018
23
21

Spontaneous behaviors drive multidimensional, brainwide activity.
Carsen Stringer, Marius Pachitariu, Nicholas Steinmetz, Charu Bai Reddy, Matteo Carandini, Kenneth D Harris. Science 2019
228
11


Single-trial neural dynamics are dominated by richly varied movements.
Simon Musall, Matthew T Kaufman, Ashley L Juavinett, Steven Gluf, Anne K Churchland. Nat Neurosci 2019
153
11

Deconstructing Hunting Behavior Reveals a Tightly Coupled Stimulus-Response Loop.
Duncan S Mearns, Joseph C Donovan, António M Fernandes, Julia L Semmelhack, Herwig Baier. Curr Biol 2020
31
16

Big behavior: challenges and opportunities in a new era of deep behavior profiling.
Lukas von Ziegler, Oliver Sturman, Johannes Bohacek. Neuropsychopharmacology 2021
15
33

Deep learning tools for the measurement of animal behavior in neuroscience.
Mackenzie Weygandt Mathis, Alexander Mathis. Curr Opin Neurobiol 2020
45
11


P1 interneurons promote a persistent internal state that enhances inter-male aggression in Drosophila.
Eric D Hoopfer, Yonil Jung, Hidehiko K Inagaki, Gerald M Rubin, David J Anderson. Elife 2015
97
9

Automated monitoring and analysis of social behavior in Drosophila.
Heiko Dankert, Liming Wang, Eric D Hoopfer, David J Anderson, Pietro Perona. Nat Methods 2009
183
9

Emergence of long timescales and stereotyped behaviors in Caenorhabditis elegans.
Greg J Stephens, Matthew Bueno de Mesquita, William S Ryu, William Bialek. Proc Natl Acad Sci U S A 2011
44
9


Changes in Postural Syntax Characterize Sensory Modulation and Natural Variation of C. elegans Locomotion.
Roland F Schwarz, Robyn Branicky, Laura J Grundy, William R Schafer, André E X Brown. PLoS Comput Biol 2015
25
16

A suppression hierarchy among competing motor programs drives sequential grooming in Drosophila.
Andrew M Seeds, Primoz Ravbar, Phuong Chung, Stefanie Hampel, Frank M Midgley, Brett D Mensh, Julie H Simpson. Elife 2014
75
9

The Spatiotemporal Organization of the Striatum Encodes Action Space.
Andreas Klaus, Gabriela J Martins, Vitor B Paixao, Pengcheng Zhou, Liam Paninski, Rui M Costa. Neuron 2017
93
9

Automated multi-day tracking of marked mice for the analysis of social behaviour.
Shay Ohayon, Ofer Avni, Adam L Taylor, Pietro Perona, S E Roian Egnor. J Neurosci Methods 2013
63
9

Efficient cortical coding of 3D posture in freely behaving rats.
Bartul Mimica, Benjamin A Dunn, Tuce Tombaz, V P T N C Srikanth Bojja, Jonathan R Whitlock. Science 2018
39
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.