A citation-based method for searching scientific literature

Elodie Choque, Claudia Schneider, Olivier Gadal, Christophe Dez. Nucleic Acids Res 2018
Times Cited: 9







List of co-cited articles
77 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The complete structure of the small-subunit processome.
Jonas Barandun, Malik Chaker-Margot, Mirjam Hunziker, Kelly R Molloy, Brian T Chait, Sebastian Klinge. Nat Struct Mol Biol 2017
69
77

Architecture of the 90S Pre-ribosome: A Structural View on the Birth of the Eukaryotic Ribosome.
Markus Kornprobst, Martin Turk, Nikola Kellner, Jingdong Cheng, Dirk Flemming, Isabelle Koš-Braun, Martin Koš, Matthias Thoms, Otto Berninghausen, Roland Beckmann,[...]. Cell 2016
115
77

A Puzzle of Life: Crafting Ribosomal Subunits.
Dieter Kressler, Ed Hurt, Jochen Baßler. Trends Biochem Sci 2017
85
55

3.2-Å-resolution structure of the 90S preribosome before A1 pre-rRNA cleavage.
Jingdong Cheng, Nikola Kellner, Otto Berninghausen, Ed Hurt, Roland Beckmann. Nat Struct Mol Biol 2017
58
55

Assembly and structure of the SSU processome-a nucleolar precursor of the small ribosomal subunit.
Jonas Barandun, Mirjam Hunziker, Sebastian Klinge. Curr Opin Struct Biol 2018
38
55

A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis.
François Dragon, Jennifer E G Gallagher, Patricia A Compagnone-Post, Brianna M Mitchell, Kara A Porwancher, Karen A Wehner, Steven Wormsley, Robert E Settlage, Jeffrey Shabanowitz, Yvonne Osheim,[...]. Nature 2002
517
55

Ribosome assembly coming into focus.
Sebastian Klinge, John L Woolford. Nat Rev Mol Cell Biol 2019
137
55

Stepwise and dynamic assembly of the earliest precursors of small ribosomal subunits in yeast.
Liman Zhang, Chen Wu, Gaihong Cai, She Chen, Keqiong Ye. Genes Dev 2016
68
44

Architecture of the yeast small subunit processome.
Malik Chaker-Margot, Jonas Barandun, Mirjam Hunziker, Sebastian Klinge. Science 2017
80
44

Ribosome biogenesis in the yeast Saccharomyces cerevisiae.
John L Woolford, Susan J Baserga. Genetics 2013
431
44

The Exosome Is Recruited to RNA Substrates through Specific Adaptor Proteins.
Matthias Thoms, Emma Thomson, Jochen Baßler, Marén Gnädig, Sabine Griesel, Ed Hurt. Cell 2015
112
44

Molecular architecture of the 90S small subunit pre-ribosome.
Qi Sun, Xing Zhu, Jia Qi, Weidong An, Pengfei Lan, Dan Tan, Rongchang Chen, Bing Wang, Sanduo Zheng, Cheng Zhang,[...]. Elife 2017
85
44

Visualizing late states of human 40S ribosomal subunit maturation.
Michael Ameismeier, Jingdong Cheng, Otto Berninghausen, Roland Beckmann. Nature 2018
56
44

An overview of pre-ribosomal RNA processing in eukaryotes.
Anthony K Henras, Célia Plisson-Chastang, Marie-Françoise O'Donohue, Anirban Chakraborty, Pierre-Emmanuel Gleizes. Wiley Interdiscip Rev RNA 2015
290
44


90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors.
Paola Grandi, Vladimir Rybin, Jochen Bassler, Elisabeth Petfalski, Daniela Strauss, Martina Marzioch, Thorsten Schäfer, Bernhard Kuster, Herbert Tschochner, David Tollervey,[...]. Mol Cell 2002
367
44


Stage-specific assembly events of the 6-MDa small-subunit processome initiate eukaryotic ribosome biogenesis.
Malik Chaker-Margot, Mirjam Hunziker, Jonas Barandun, Brian D Dill, Sebastian Klinge. Nat Struct Mol Biol 2015
68
33

Tuning the ribosome: The influence of rRNA modification on eukaryotic ribosome biogenesis and function.
Katherine E Sloan, Ahmed S Warda, Sunny Sharma, Karl-Dieter Entian, Denis L J Lafontaine, Markus T Bohnsack. RNA Biol 2017
227
33

Structural Heterogeneity in Pre-40S Ribosomes.
Matthew C Johnson, Homa Ghalei, Katelyn A Doxtader, Katrin Karbstein, M Elizabeth Stroupe. Structure 2017
39
33

Cryo-EM structure of a late pre-40S ribosomal subunit from Saccharomyces cerevisiae.
André Heuer, Emma Thomson, Christian Schmidt, Otto Berninghausen, Thomas Becker, Ed Hurt, Roland Beckmann. Elife 2017
39
33

The DEAH-box helicase Dhr1 dissociates U3 from the pre-rRNA to promote formation of the central pseudoknot.
Richa Sardana, Xin Liu, Sander Granneman, Jieyi Zhu, Michael Gill, Ophelia Papoulas, Edward M Marcotte, David Tollervey, Carl C Correll, Arlen W Johnson. PLoS Biol 2015
44
33

Utp14 Recruits and Activates the RNA Helicase Dhr1 To Undock U3 snoRNA from the Preribosome.
Jieyi Zhu, Xin Liu, Margarida Anjos, Carl C Correll, Arlen W Johnson. Mol Cell Biol 2016
30
33

The PIN domain endonuclease Utp24 cleaves pre-ribosomal RNA at two coupled sites in yeast and humans.
Graeme R Wells, Franziska Weichmann, David Colvin, Katherine E Sloan, Grzegorz Kudla, David Tollervey, Nicholas J Watkins, Claudia Schneider. Nucleic Acids Res 2016
35
33

Eukaryotic Ribosome Assembly.
Jochen Baßler, Ed Hurt. Annu Rev Biochem 2019
94
33

Studies on the assembly characteristics of large subunit ribosomal proteins in S. cerevisae.
Uli Ohmayer, Michael Gamalinda, Martina Sauert, Julius Ossowski, Gisela Pöll, Jan Linnemann, Thomas Hierlmeier, Jorge Perez-Fernandez, Beril Kumcuoglu, Isabelle Leger-Silvestre,[...]. PLoS One 2013
38
33

Modular assembly of the nucleolar pre-60S ribosomal subunit.
Zahra Assur Sanghai, Linamarie Miller, Kelly R Molloy, Jonas Barandun, Mirjam Hunziker, Malik Chaker-Margot, Junjie Wang, Brian T Chait, Sebastian Klinge. Nature 2018
53
33

Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Lukas Kater, Matthias Thoms, Clara Barrio-Garcia, Jingdong Cheng, Sherif Ismail, Yasar Luqman Ahmed, Gert Bange, Dieter Kressler, Otto Berninghausen, Irmgard Sinning,[...]. Cell 2017
70
33

Maturation of pre-40S particles in yeast and humans.
Emilie Cerezo, Célia Plisson-Chastang, Anthony K Henras, Simon Lebaron, Pierre-Emmanuel Gleizes, Marie-Françoise O'Donohue, Yves Romeo, Yves Henry. Wiley Interdiscip Rev RNA 2019
24
33

The path from nucleolar 90S to cytoplasmic 40S pre-ribosomes.
Thorsten Schäfer, Daniela Strauss, Elisabeth Petfalski, David Tollervey, Ed Hurt. EMBO J 2003
238
33


Making ribosomes.
Alessandro Fatica, David Tollervey. Curr Opin Cell Biol 2002
393
33



The yeast exosome and human PM-Scl are related complexes of 3' --> 5' exonucleases.
C Allmang, E Petfalski, A Podtelejnikov, M Mann, D Tollervey, P Mitchell. Genes Dev 1999
362
33


Eukaryotic ribosome assembly, transport and quality control.
Cohue Peña, Ed Hurt, Vikram Govind Panse. Nat Struct Mol Biol 2017
107
22

Roles of eukaryotic ribosomal proteins in maturation and transport of pre-18S rRNA and ribosome function.
Sébastien Ferreira-Cerca, Gisela Pöll, Pierre-Emmanuel Gleizes, Herbert Tschochner, Philipp Milkereit. Mol Cell 2005
216
22

Global analysis of protein expression in yeast.
Sina Ghaemmaghami, Won-Ki Huh, Kiowa Bower, Russell W Howson, Archana Belle, Noah Dephoure, Erin K O'Shea, Jonathan S Weissman. Nature 2003
22

The structure of the eukaryotic ribosome at 3.0 Å resolution.
Adam Ben-Shem, Nicolas Garreau de Loubresse, Sergey Melnikov, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Science 2011
718
22

Interdependent action of KH domain proteins Krr1 and Dim2 drive the 40S platform assembly.
Miriam Sturm, Jingdong Cheng, Jochen Baßler, Roland Beckmann, Ed Hurt. Nat Commun 2017
16
22

Comprehensive analysis of diverse ribonucleoprotein complexes.
Marlene Oeffinger, Karen E Wei, Richard Rogers, Jeffrey A DeGrasse, Brian T Chait, John D Aitchison, Michael P Rout. Nat Methods 2007
195
22

The human 18S rRNA base methyltransferases DIMT1L and WBSCR22-TRMT112 but not rRNA modification are required for ribosome biogenesis.
Christiane Zorbas, Emilien Nicolas, Ludivine Wacheul, Emmeline Huvelle, Valérie Heurgué-Hamard, Denis L J Lafontaine. Mol Biol Cell 2015
63
22

The ribosome biogenesis factor yUtp23/hUTP23 coordinates key interactions in the yeast and human pre-40S particle and hUTP23 contains an essential PIN domain.
Graeme R Wells, Franziska Weichmann, Katherine E Sloan, David Colvin, Nicholas J Watkins, Claudia Schneider. Nucleic Acids Res 2017
17
22

RNA helicase DDX21 coordinates transcription and ribosomal RNA processing.
Eliezer Calo, Ryan A Flynn, Lance Martin, Robert C Spitale, Howard Y Chang, Joanna Wysocka. Nature 2015
152
22

Structure of a human pre-40S particle points to a role for RACK1 in the final steps of 18S rRNA processing.
Natacha Larburu, Christian Montellese, Marie-Françoise O'Donohue, Ulrike Kutay, Pierre-Emmanuel Gleizes, Célia Plisson-Chastang. Nucleic Acids Res 2016
34
22

Viewing pre-60S maturation at a minute's timescale.
Gertrude Zisser, Uli Ohmayer, Christina Mauerhofer, Valentin Mitterer, Isabella Klein, Gerald N Rechberger, Heimo Wolinski, Michael Prattes, Brigitte Pertschy, Philipp Milkereit,[...]. Nucleic Acids Res 2018
11
22

Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae.
M S Longtine, A McKenzie, D J Demarini, N G Shah, A Wach, A Brachat, P Philippsen, J R Pringle. Yeast 1998
22

Studies on the Coordination of Ribosomal Protein Assembly Events Involved in Processing and Stabilization of Yeast Early Large Ribosomal Subunit Precursors.
Uli Ohmayer, Álvaro Gil-Hernández, Martina Sauert, Pilar Martín-Marcos, Mercedes Tamame, Herbert Tschochner, Joachim Griesenbeck, Philipp Milkereit. PLoS One 2015
10
22

CTFFIND4: Fast and accurate defocus estimation from electron micrographs.
Alexis Rohou, Nikolaus Grigorieff. J Struct Biol 2015
22


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.