A citation-based method for searching scientific literature

B Mikolaskova, M Jurcik, I Cipakova, M Kretova, M Chovanec, L Cipak. Curr Genet 2018
Times Cited: 36







List of co-cited articles
213 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


ATM and ATR substrate analysis reveals extensive protein networks responsive to DNA damage.
Shuhei Matsuoka, Bryan A Ballif, Agata Smogorzewska, E Robert McDonald, Kristen E Hurov, Ji Luo, Corey E Bakalarski, Zhenming Zhao, Nicole Solimini, Yaniv Lerenthal,[...]. Science 2007
19


A genome-wide homologous recombination screen identifies the RNA-binding protein RBMX as a component of the DNA-damage response.
Britt Adamson, Agata Smogorzewska, Frederic D Sigoillot, Randall W King, Stephen J Elledge. Nat Cell Biol 2012
292
16

RNA Processing and Genome Stability: Cause and Consequence.
Vihandha O Wickramasinghe, Ashok R Venkitaraman. Mol Cell 2016
73
13

CRISPR screens identify genomic ribonucleotides as a source of PARP-trapping lesions.
Michal Zimmermann, Olga Murina, Martin A M Reijns, Angelo Agathanggelou, Rachel Challis, Žygimantė Tarnauskaitė, Morwenna Muir, Adeline Fluteau, Michael Aregger, Andrea McEwan,[...]. Nature 2018
191
11

R loops: from transcription byproducts to threats to genome stability.
Andrés Aguilera, Tatiana García-Muse. Mol Cell 2012
617
11

Hallmarks of cancer: the next generation.
Douglas Hanahan, Robert A Weinberg. Cell 2011
11


A genome-wide siRNA screen reveals diverse cellular processes and pathways that mediate genome stability.
Renee D Paulsen, Deena V Soni, Roy Wollman, Angela T Hahn, Muh-Ching Yee, Anna Guan, Jayne A Hesley, Steven C Miller, Evan F Cromwell, David E Solow-Cordero,[...]. Mol Cell 2009
389
11


Transcription as a source of genome instability.
Nayun Kim, Sue Jinks-Robertson. Nat Rev Genet 2012
210
8

The DNA damage response: making it safe to play with knives.
Alberto Ciccia, Stephen J Elledge. Mol Cell 2010
8

Regulatory Potential of the RNA Processing Machinery: Implications for Human Disease.
Kirstyn T Carey, Vihandha O Wickramasinghe. Trends Genet 2018
25
12




Novel insights into molecular chaperone regulation of ribonucleotide reductase.
Laura E Knighton, Lena E Delgado, Andrew W Truman. Curr Genet 2019
15
20


Transient RNA-DNA Hybrids Are Required for Efficient Double-Strand Break Repair.
Corina Ohle, Rafael Tesorero, Géza Schermann, Nikolay Dobrev, Irmgard Sinning, Tamás Fischer. Cell 2016
233
8

Damage-induced lncRNAs control the DNA damage response through interaction with DDRNAs at individual double-strand breaks.
Flavia Michelini, Sethuramasundaram Pitchiaya, Valerio Vitelli, Sheetal Sharma, Ubaldo Gioia, Fabio Pessina, Matteo Cabrini, Yejun Wang, Ilaria Capozzo, Fabio Iannelli,[...]. Nat Cell Biol 2017
191
8

Human senataxin resolves RNA/DNA hybrids formed at transcriptional pause sites to promote Xrn2-dependent termination.
Konstantina Skourti-Stathaki, Nicholas J Proudfoot, Natalia Gromak. Mol Cell 2011
480
8


The RNA Splicing Response to DNA Damage.
Lulzim Shkreta, Benoit Chabot. Biomolecules 2015
87
8

Proteomic investigations reveal a role for RNA processing factor THRAP3 in the DNA damage response.
Petra Beli, Natalia Lukashchuk, Sebastian A Wagner, Brian T Weinert, Jesper V Olsen, Linda Baskcomb, Matthias Mann, Stephen P Jackson, Chunaram Choudhary. Mol Cell 2012
237
8

Regulation of alternative splicing by p300-mediated acetylation of splicing factors.
Ahmad Siam, Mai Baker, Leah Amit, Gal Regev, Alona Rabner, Rauf Ahmad Najar, Mercedes Bentata, Sara Dahan, Klil Cohen, Sarah Araten,[...]. RNA 2019
20
15


DNA damage regulates alternative splicing through inhibition of RNA polymerase II elongation.
Manuel J Muñoz, M Soledad Pérez Santangelo, Maria P Paronetto, Manuel de la Mata, Federico Pelisch, Stéphanie Boireau, Kira Glover-Cutter, Claudia Ben-Dov, Matías Blaustein, Juan J Lozano,[...]. Cell 2009
227
8


The DNA-damage response in human biology and disease.
Stephen P Jackson, Jiri Bartek. Nature 2009
8


Identification and characterization of FUS/TLS as a new target of ATM.
Mary Gardiner, Rachel Toth, Franck Vandermoere, Nicholas A Morrice, John Rouse. Biochem J 2008
81
8

Involvement of Matrin 3 and SFPQ/NONO in the DNA damage response.
Maayan Salton, Yaniv Lerenthal, Shih-Ya Wang, David J Chen, Yosef Shiloh. Cell Cycle 2010
145
8

Site-specific DICER and DROSHA RNA products control the DNA-damage response.
Sofia Francia, Flavia Michelini, Alka Saxena, Dave Tang, Michiel de Hoon, Viviana Anelli, Marina Mione, Piero Carninci, Fabrizio d'Adda di Fagagna. Nature 2012
365
8

A census of human RNA-binding proteins.
Stefanie Gerstberger, Markus Hafner, Thomas Tuschl. Nat Rev Genet 2014
8

A brave new world of RNA-binding proteins.
Matthias W Hentze, Alfredo Castello, Thomas Schwarzl, Thomas Preiss. Nat Rev Mol Cell Biol 2018
654
8

The complete spectrum of yeast chromosome instability genes identifies candidate CIN cancer genes and functional roles for ASTRA complex components.
Peter C Stirling, Michelle S Bloom, Tejomayee Solanki-Patil, Stephanie Smith, Payal Sipahimalani, Zhijian Li, Megan Kofoed, Shay Ben-Aroya, Kyungjae Myung, Philip Hieter. PLoS Genet 2011
115
5

Mutagenic processing of ribonucleotides in DNA by yeast topoisomerase I.
Nayun Kim, Shar-yin N Huang, Jessica S Williams, Yue C Li, Alan B Clark, Jang-Eun Cho, Thomas A Kunkel, Yves Pommier, Sue Jinks-Robertson. Science 2011
219
5

Enzymatic removal of ribonucleotides from DNA is essential for mammalian genome integrity and development.
Martin A M Reijns, Björn Rabe, Rachel E Rigby, Pleasantine Mill, Katy R Astell, Laura A Lettice, Shelagh Boyle, Andrea Leitch, Margaret Keighren, Fiona Kilanowski,[...]. Cell 2012
313
5

Genome instability due to ribonucleotide incorporation into DNA.
Stephanie A Nick McElhinny, Dinesh Kumar, Alan B Clark, Danielle L Watt, Brian E Watts, Else-Britt Lundström, Erik Johansson, Andrei Chabes, Thomas A Kunkel. Nat Chem Biol 2010
281
5

Synthesis and metabolism of uracil-containing deoxyribonucleic acid in Escherichia coli.
H R Warner, B K Duncan, C Garrett, J Neuhard. J Bacteriol 1981
105
5

Avoidance of ribonucleotide-induced mutations by RNase H2 and Srs2-Exo1 mechanisms.
Catherine J Potenski, Hengyao Niu, Patrick Sung, Hannah L Klein. Nature 2014
70
5


Rad5 coordinates translesion DNA synthesis pathway by recognizing specific DNA structures in saccharomyces cerevisiae.
Qifu Fan, Xin Xu, Xi Zhao, Qian Wang, Wei Xiao, Ying Guo, Yu V Fu. Curr Genet 2018
22
9





A role for the spindle assembly checkpoint in the DNA damage response.
Roger Palou, Gloria Palou, David G Quintana. Curr Genet 2017
30
6

A role for Saccharomyces cerevisiae histone H2A in DNA repair.
J A Downs, N F Lowndes, S P Jackson. Nature 2000
500
5

Analysis of replication profiles reveals key role of RFC-Ctf18 in yeast replication stress response.
Laure Crabbé, Aubin Thomas, Véronique Pantesco, John De Vos, Philippe Pasero, Armelle Lengronne. Nat Struct Mol Biol 2010
97
5


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.