A citation-based method for searching scientific literature

Carlos H Trasviña-Arenas, Noe Baruch-Torres, Francisco J Cordoba-Andrade, Víctor M Ayala-García, Paola L García-Medel, Corina Díaz-Quezada, Antolín Peralta-Castro, José Juan Ordaz-Ortiz, Luis G Brieba. DNA Repair (Amst) 2018
Times Cited: 16







List of co-cited articles
249 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Divergent roles for the two PolI-like organelle DNA polymerases of Arabidopsis.
Jean-Sébastien Parent, Etienne Lepage, Normand Brisson. Plant Physiol 2011
67
75


Plant Mitochondrial Genomes: Dynamics and Mechanisms of Mutation.
José M Gualberto, Kathleen J Newton. Annu Rev Plant Biol 2017
134
56


The plant-specific ssDNA binding protein OSB1 is involved in the stoichiometric transmission of mitochondrial DNA in Arabidopsis.
Vincent Zaegel, Benoît Guermann, Monique Le Ret, Charles Andrés, Denise Meyer, Mathieu Erhardt, Jean Canaday, José M Gualberto, Patrice Imbault. Plant Cell 2006
80
56

Plant organellar DNA polymerases repair double-stranded breaks by microhomology-mediated end-joining.
Paola L García-Medel, Noe Baruch-Torres, Antolín Peralta-Castro, Carlos H Trasviña-Arenas, Alfredo Torres-Larios, Luis G Brieba. Nucleic Acids Res 2019
19
56

Plant mitochondria possess a short-patch base excision DNA repair pathway.
Pierre Boesch, Noha Ibrahim, François Paulus, Anne Cosset, Vladislav Tarasenko, André Dietrich. Nucleic Acids Res 2009
32
50


Conservation of POPs, the plant organellar DNA polymerases, in eukaryotes.
Takashi Moriyama, Kimihiro Terasawa, Naoki Sato. Protist 2011
28
50


Plastid DNA polymerases from higher plants, Arabidopsis thaliana.
Yoko Mori, Seisuke Kimura, Ai Saotome, Nobuyuki Kasai, Norihiro Sakaguchi, Yukinobu Uchiyama, Toyotaka Ishibashi, Taichi Yamamoto, Hiroyuki Chiku, Kengo Sakaguchi. Biochem Biophys Res Commun 2005
37
50

RecA-dependent DNA repair results in increased heteroplasmy of the Arabidopsis mitochondrial genome.
Marie Miller-Messmer, Kristina Kühn, Marc Bichara, Monique Le Ret, Patrice Imbault, José M Gualberto. Plant Physiol 2012
49
50


Double-strand break repair processes drive evolution of the mitochondrial genome in Arabidopsis.
Jaime I Davila, Maria P Arrieta-Montiel, Yashitola Wamboldt, Jun Cao, Joerg Hagmann, Vikas Shedge, Ying-Zhi Xu, Detlef Weigel, Sally A Mackenzie. BMC Biol 2011
126
50

Plant organellar DNA polymerases paralogs exhibit dissimilar nucleotide incorporation fidelity.
Víctor M Ayala-García, Noe Baruch-Torres, Paola L García-Medel, Luis G Brieba. FEBS J 2018
13
61


DNA maintenance in plastids and mitochondria of plants.
Delene J Oldenburg, Arnold J Bendich. Front Plant Sci 2015
62
43



Characterization of a mitochondrially targeted single-stranded DNA-binding protein in Arabidopsis thaliana.
Andrew C Edmondson, Daqing Song, Luis A Alvarez, Melisa K Wall, David Almond, David A McClellan, Anthony Maxwell, Brent L Nielsen. Mol Genet Genomics 2005
27
43

Plant mitochondrial recombination surveillance requires unusual RecA and MutS homologs.
Vikas Shedge, Maria Arrieta-Montiel, Alan C Christensen, Sally A Mackenzie. Plant Cell 2007
152
43

Recombination and the maintenance of plant organelle genome stability.
Alexandre Maréchal, Normand Brisson. New Phytol 2010
217
43

Whirly proteins maintain plastid genome stability in Arabidopsis.
Alexandre Maréchal, Jean-Sébastien Parent, Félix Véronneau-Lafortune, Alexandre Joyeux, B Franz Lang, Normand Brisson. Proc Natl Acad Sci U S A 2009
130
43

Crystal structures of DNA-Whirly complexes and their role in Arabidopsis organelle genome repair.
Laurent Cappadocia, Alexandre Maréchal, Jean-Sébastien Parent, Etienne Lepage, Jurgen Sygusch, Normand Brisson. Plant Cell 2010
84
43


Biochemical properties of a plastidial DNA polymerase of rice.
Ryo Takeuchi, Seisuke Kimura, Ai Saotome, Kengo Sakaguchi. Plant Mol Biol 2007
28
37

Arabidopsis thaliana organelles mimic the T7 phage DNA replisome with specific interactions between Twinkle protein and DNA polymerases Pol1A and Pol1B.
Stewart A Morley, Antolín Peralta-Castro, Luis G Brieba, Justin Miller, Kai Li Ong, Perry G Ridge, Amanda Oliphant, Stephen Aldous, Brent L Nielsen. BMC Plant Biol 2019
9
66




Mitochondrial genome dynamics in plants and animals: convergent gene fusions of a MutS homologue.
Ricardo V Abdelnoor, Alan C Christensen, Saleem Mohammed, Bryan Munoz-Castillo, Hideaki Moriyama, Sally A Mackenzie. J Mol Evol 2006
57
31


Diversity of the Arabidopsis mitochondrial genome occurs via nuclear-controlled recombination activity.
Maria P Arrieta-Montiel, Vikas Shedge, Jaime Davila, Alan C Christensen, Sally A Mackenzie. Genetics 2009
90
31


Substoichiometric shifting in the plant mitochondrial genome is influenced by a gene homologous to MutS.
Ricardo V Abdelnoor, Ryan Yule, Annakaisa Elo, Alan C Christensen, Gilbert Meyer-Gauen, Sally A Mackenzie. Proc Natl Acad Sci U S A 2003
135
31

The Arabidopsis At1g30680 gene encodes a homologue to the phage T7 gp4 protein that has both DNA primase and DNA helicase activities.
Joann Diray-Arce, Bin Liu, John D Cupp, Travis Hunt, Brent L Nielsen. BMC Plant Biol 2013
32
31


Dual-domain, dual-targeting organellar protein presequences in Arabidopsis can use non-AUG start codons.
Alan C Christensen, Anna Lyznik, Saleem Mohammed, Christian G Elowsky, Annakaisa Elo, Ryan Yule, Sally A Mackenzie. Plant Cell 2005
96
31


Rapid evolution of enormous, multichromosomal genomes in flowering plant mitochondria with exceptionally high mutation rates.
Daniel B Sloan, Andrew J Alverson, John P Chuckalovcak, Martin Wu, David E McCauley, Jeffrey D Palmer, Douglas R Taylor. PLoS Biol 2012
263
25

Effects of reduced chloroplast gene copy number on chloroplast gene expression in maize.
Dylan B Udy, Susan Belcher, Rosalind Williams-Carrier, José M Gualberto, Alice Barkan. Plant Physiol 2012
46
25


DNA repair in plant mitochondria - a complete base excision repair pathway in potato tuber mitochondria.
Beatriz Ferrando, Ana L D M Furlanetto, Ricardo Gredilla, Jesper F Havelund, Kim H Hebelstrup, Ian M Møller, Tinna Stevnsner. Physiol Plant 2019
10
40

DNA-binding proteins of the Whirly family in Arabidopsis thaliana are targeted to the organelles.
Kirsten Krause, Isabell Kilbienski, Maria Mulisch, Anja Rödiger, Anke Schäfer, Karin Krupinska. FEBS Lett 2005
73
25

The plant mitochondrial genome: dynamics and maintenance.
José M Gualberto, Daria Mileshina, Clémentine Wallet, Adnan Khan Niazi, Frédérique Weber-Lotfi, André Dietrich. Biochimie 2014
96
25

Minireview: DNA replication in plant mitochondria.
John D Cupp, Brent L Nielsen. Mitochondrion 2014
31
25


Arabidopsis uracil DNA glycosylase (UNG) is required for base excision repair of uracil and increases plant sensitivity to 5-fluorouracil.
Dolores Córdoba-Cañero, Emeline Dubois, Rafael R Ariza, Marie-Pascale Doutriaux, Teresa Roldán-Arjona. J Biol Chem 2010
27
25

DNA ligase 1 deficient plants display severe growth defects and delayed repair of both DNA single and double strand breaks.
Wanda M Waterworth, Jaroslav Kozak, Claire M Provost, Clifford M Bray, Karel J Angelis, Christopher E West. BMC Plant Biol 2009
42
25

Arabidopsis ARP endonuclease functions in a branched base excision DNA repair pathway completed by LIG1.
Dolores Córdoba-Cañero, Teresa Roldán-Arjona, Rafael R Ariza. Plant J 2011
30
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.