A citation-based method for searching scientific literature

Rajula Elango, Zachary Kockler, Liping Liu, Anna Malkova. Methods Enzymol 2018
Times Cited: 6







List of co-cited articles
32 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Defective break-induced replication leads to half-crossovers in Saccharomyces cerevisiae.
Angela Deem, Krista Barker, Kelly Vanhulle, Brandon Downing, Alexandra Vayl, Anna Malkova. Genetics 2008
75
50

RAD51-dependent break-induced replication differs in kinetics and checkpoint responses from RAD51-mediated gene conversion.
Anna Malkova, Maria L Naylor, Miyuki Yamaguchi, Grzegorz Ira, James E Haber. Mol Cell Biol 2005
128
50

Migrating bubble during break-induced replication drives conservative DNA synthesis.
Natalie Saini, Sreejith Ramakrishnan, Rajula Elango, Sandeep Ayyar, Yu Zhang, Angela Deem, Grzegorz Ira, James E Haber, Kirill S Lobachev, Anna Malkova. Nature 2013
216
50

Break induced replication in eukaryotes: mechanisms, functions, and consequences.
Cynthia J Sakofsky, Anna Malkova. Crit Rev Biochem Mol Biol 2017
79
50

Break-induced DNA replication.
Ranjith P Anand, Susan T Lovett, James E Haber. Cold Spring Harb Perspect Biol 2013
147
50

Break-induced replication is highly inaccurate.
Angela Deem, Andrea Keszthelyi, Tiffany Blackgrove, Alexandra Vayl, Barbara Coffey, Ruchi Mathur, Andrei Chabes, Anna Malkova. PLoS Biol 2011
188
50

Template switching during break-induced replication.
Catherine E Smith, Bertrand Llorente, Lorraine S Symington. Nature 2007
244
50

Break-induced replication: what is it and what is it for?
Bertrand Llorente, Catherine E Smith, Lorraine S Symington. Cell Cycle 2008
215
50

Break-induced replication and telomerase-independent telomere maintenance require Pol32.
John R Lydeard, Suvi Jain, Miyuki Yamaguchi, James E Haber. Nature 2007
342
50

Recovery from checkpoint-mediated arrest after repair of a double-strand break requires Srs2 helicase.
Moreshwar B Vaze, Achille Pellicioli, Sang Eun Lee, Grzegorz Ira, Giordano Liberi, Ayelet Arbel-Eden, Marco Foiani, James E Haber. Mol Cell 2002
255
50

Pif1 helicase and Polδ promote recombination-coupled DNA synthesis via bubble migration.
Marenda A Wilson, YoungHo Kwon, Yuanyuan Xu, Woo-Hyun Chung, Peter Chi, Hengyao Niu, Ryan Mayle, Xuefeng Chen, Anna Malkova, Patrick Sung,[...]. Nature 2013
199
50



Break-induced replication: functions and molecular mechanism.
Anna Malkova, Grzegorz Ira. Curr Opin Genet Dev 2013
116
33



Microarray-based genetic screen defines SAW1, a gene required for Rad1/Rad10-dependent processing of recombination intermediates.
Fuyang Li, Junchao Dong, Xuewen Pan, Ji-Hyun Oum, Jef D Boeke, Sang Eun Lee. Mol Cell 2008
73
33

A recombination execution checkpoint regulates the choice of homologous recombination pathway during DNA double-strand break repair.
Suvi Jain, Neal Sugawara, John Lydeard, Moreshwar Vaze, Nicolas Tanguy Le Gac, James E Haber. Genes Dev 2009
99
33

Regulation of recombination and genomic maintenance.
Wolf-Dietrich Heyer. Cold Spring Harb Perspect Biol 2015
64
33

Role of Saw1 in Rad1/Rad10 complex assembly at recombination intermediates in budding yeast.
Fuyang Li, Junachao Dong, Robin Eichmiller, Cory Holland, Eugen Minca, Rohit Prakash, Patrick Sung, Eun Yong Shim, Jennifer A Surtees, Sang Eun Lee. EMBO J 2013
31
33

Error-Prone Repair of DNA Double-Strand Breaks.
Kasey Rodgers, Mitch McVey. J Cell Physiol 2016
172
33




SMARCAD1 Phosphorylation and Ubiquitination Are Required for Resection during DNA Double-Strand Break Repair.
Sharmistha Chakraborty, Raj K Pandita, Shashank Hambarde, Abid R Mattoo, Vijaya Charaka, Kazi M Ahmed, Swaminathan P Iyer, Clayton R Hunt, Tej K Pandita. iScience 2018
24
33

Break-induced replication repair of damaged forks induces genomic duplications in human cells.
Lorenzo Costantino, Sotirios K Sotiriou, Juha K Rantala, Simon Magin, Emil Mladenov, Thomas Helleday, James E Haber, George Iliakis, Olli P Kallioniemi, Thanos D Halazonetis. Science 2014
277
33

Break-induced telomere synthesis underlies alternative telomere maintenance.
Robert L Dilley, Priyanka Verma, Nam Woo Cho, Harrison D Winters, Anne R Wondisford, Roger A Greenberg. Nature 2016
209
33

The causes of replication stress and their consequences on genome stability and cell fate.
Indiana Magdalou, Bernard S Lopez, Philippe Pasero, Sarah A E Lambert. Semin Cell Dev Biol 2014
83
33

Replication stress induces sister-chromatid bridging at fragile site loci in mitosis.
Kok Lung Chan, Timea Palmai-Pallag, Songmin Ying, Ian D Hickson. Nat Cell Biol 2009
415
33

Break-induced replication promotes formation of lethal joint molecules dissolved by Srs2.
Rajula Elango, Ziwei Sheng, Jessica Jackson, Jenna DeCata, Younis Ibrahim, Nhung T Pham, Diana H Liang, Cynthia J Sakofsky, Alessandro Vindigni, Kirill S Lobachev,[...]. Nat Commun 2017
30
33

DNA Polymerase Delta Synthesizes Both Strands during Break-Induced Replication.
Roberto A Donnianni, Zhi-Xiong Zhou, Scott A Lujan, Amr Al-Zain, Valerie Garcia, Eleanor Glancy, Adam B Burkholder, Thomas A Kunkel, Lorraine S Symington. Mol Cell 2019
26
33

Break-induced replication occurs by conservative DNA synthesis.
Roberto A Donnianni, Lorraine S Symington. Proc Natl Acad Sci U S A 2013
119
33

DNA-binding polarity of human replication protein A positions nucleases in nucleotide excision repair.
W L de Laat, E Appeldoorn, K Sugasawa, E Weterings, N G Jaspers, J H Hoeijmakers. Genes Dev 1998
233
16


The pattern of gene amplification is determined by the chromosomal location of hairpin-capped breaks.
Vidhya Narayanan, Piotr A Mieczkowski, Hyun-Min Kim, Thomas D Petes, Kirill S Lobachev. Cell 2006
121
16



Chromosomal translocations in yeast induced by low levels of DNA polymerase a model for chromosome fragile sites.
Francene J Lemoine, Natasha P Degtyareva, Kirill Lobachev, Thomas D Petes. Cell 2005
239
16


Competitive repair by naturally dispersed repetitive DNA during non-allelic homologous recombination.
Margaret L Hoang, Frederick J Tan, David C Lai, Sue E Celniker, Roger A Hoskins, Maitreya J Dunham, Yixian Zheng, Douglas Koshland. PLoS Genet 2010
41
16

Nucleotide excision repair in yeast.
S Prakash, L Prakash. Mutat Res 2000
266
16


A novel 506kb deletion causing εγδβ thalassemia.
Helen Rooks, Barnaby Clark, Steve Best, Peter Rushton, Matthew Oakley, Onn Shaun Thein, Ann C Cuthbert, Alison Britland, Afruj Ruf, Swee Lay Thein. Blood Cells Mol Dis 2012
17
16






DNA repeats in the human genome.
P Catasti, X Chen, S V Mariappan, E M Bradbury, G Gupta. Genetica 1999
65
16

Large inverted repeats in the vicinity of a single double-strand break strongly affect repair in yeast diploids lacking Rad51.
Brandon Downing, Rachel Morgan, Kelly VanHulle, Angela Deem, Anna Malkova. Mutat Res 2008
21
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.