A citation-based method for searching scientific literature

Aurèle Piazza, Romain Koszul, Wolf-Dietrich Heyer. Methods Enzymol 2018
Times Cited: 6







List of co-cited articles
24 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Capturing chromosome conformation.
Job Dekker, Karsten Rippe, Martijn Dekker, Nancy Kleckner. Science 2002
50

Stabilization and electrophoretic analysis of meiotic recombination intermediates in Saccharomyces cerevisiae.
Steve D Oh, Lea Jessop, Jessica P Lao, Thorsten Allers, Michael Lichten, Neil Hunter. Methods Mol Biol 2009
39
50



Yeast Mph1 helicase dissociates Rad51-made D-loops: implications for crossover control in mitotic recombination.
Rohit Prakash, Dominik Satory, Eloïse Dray, Almas Papusha, Jürgen Scheller, Wilfried Kramer, Lumir Krejci, Hannah Klein, James E Haber, Patrick Sung,[...]. Genes Dev 2009
184
50

Multi-invasions Are Recombination Byproducts that Induce Chromosomal Rearrangements.
Aurèle Piazza, William Douglass Wright, Wolf-Dietrich Heyer. Cell 2017
51
50

Dynamic Processing of Displacement Loops during Recombinational DNA Repair.
Aurèle Piazza, Shanaya Shital Shah, William Douglass Wright, Steven K Gore, Romain Koszul, Wolf-Dietrich Heyer. Mol Cell 2019
39
50

Replication dynamics of the yeast genome.
M K Raghuraman, E A Winzeler, D Collingwood, S Hunt, L Wodicka, A Conway, D J Lockhart, R W Davis, B J Brewer, W L Fangman. Science 2001
584
33



High-resolution statistical mapping reveals gene territories in live yeast.
Axel B Berger, Ghislain G Cabal, Emmanuelle Fabre, Tarn Duong, Henri Buc, Ulf Nehrbass, Jean-Christophe Olivo-Marin, Olivier Gadal, Christophe Zimmer. Nat Methods 2008
137
33

Increased chromosome mobility facilitates homology search during recombination.
Judith Miné-Hattab, Rodney Rothstein. Nat Cell Biol 2012
218
33


Defective break-induced replication leads to half-crossovers in Saccharomyces cerevisiae.
Angela Deem, Krista Barker, Kelly Vanhulle, Brandon Downing, Alexandra Vayl, Anna Malkova. Genetics 2008
74
33

Effect of nuclear architecture on the efficiency of double-strand break repair.
Neta Agmon, Batia Liefshitz, Christophe Zimmer, Emmanuelle Fabre, Martin Kupiec. Nat Cell Biol 2013
78
33


Homologous Recombination and the Formation of Complex Genomic Rearrangements.
Aurèle Piazza, Wolf-Dietrich Heyer. Trends Cell Biol 2019
32
33

Specific pathways prevent duplication-mediated genome rearrangements.
Christopher D Putnam, Tikvah K Hayes, Richard D Kolodner. Nature 2009
100
33

Srs2 promotes synthesis-dependent strand annealing by disrupting DNA polymerase δ-extending D-loops.
Jie Liu, Christopher Ede, William D Wright, Steven K Gore, Shirin S Jenkins, Bret D Freudenthal, M Todd Washington, Xavier Veaute, Wolf-Dietrich Heyer. Elife 2017
36
33



Top3-Rmi1 dissolve Rad51-mediated D loops by a topoisomerase-based mechanism.
Clare L Fasching, Petr Cejka, Stephen C Kowalczykowski, Wolf-Dietrich Heyer. Mol Cell 2015
70
33

A recombination execution checkpoint regulates the choice of homologous recombination pathway during DNA double-strand break repair.
Suvi Jain, Neal Sugawara, John Lydeard, Moreshwar Vaze, Nicolas Tanguy Le Gac, James E Haber. Genes Dev 2009
98
33


NDT80, a meiosis-specific gene required for exit from pachytene in Saccharomyces cerevisiae.
L Xu, M Ajimura, R Padmore, C Klein, N Kleckner. Mol Cell Biol 1995
247
16

Design of a synthetic yeast genome.
Sarah M Richardson, Leslie A Mitchell, Giovanni Stracquadanio, Kun Yang, Jessica S Dymond, James E DiCarlo, Dongwon Lee, Cheng Lai Victor Huang, Srinivasan Chandrasegaran, Yizhi Cai,[...]. Science 2017
211
16

Recombination, Pairing, and Synapsis of Homologs during Meiosis.
Denise Zickler, Nancy Kleckner. Cold Spring Harb Perspect Biol 2015
299
16

A pathway for mitotic chromosome formation.
Johan H Gibcus, Kumiko Samejima, Anton Goloborodko, Itaru Samejima, Natalia Naumova, Johannes Nuebler, Masato T Kanemaki, Linfeng Xie, James R Paulson, William C Earnshaw,[...]. Science 2018
252
16

Contrasting evolutionary genome dynamics between domesticated and wild yeasts.
Jia-Xing Yue, Jing Li, Louise Aigrain, Johan Hallin, Karl Persson, Karen Oliver, Anders Bergström, Paul Coupland, Jonas Warringer, Marco Cosentino Lagomarsino,[...]. Nat Genet 2017
126
16


3D organization of synthetic and scrambled chromosomes.
Guillaume Mercy, Julien Mozziconacci, Vittore F Scolari, Kun Yang, Guanghou Zhao, Agnès Thierry, Yisha Luo, Leslie A Mitchell, Michael Shen, Yue Shen,[...]. Science 2017
62
16

Meiotic chromosomes: integrating structure and function.
D Zickler, N Kleckner. Annu Rev Genet 1999
848
16

Compaction and segregation of sister chromatids via active loop extrusion.
Anton Goloborodko, Maxim V Imakaev, John F Marko, Leonid Mirny. Elife 2016
131
16

The Three-Dimensional Organization of Mammalian Genomes.
Miao Yu, Bing Ren. Annu Rev Cell Dev Biol 2017
132
16

High-resolution mapping of the spatial organization of a bacterial chromosome.
Tung B K Le, Maxim V Imakaev, Leonid A Mirny, Michael T Laub. Science 2013
320
16

A predictive computational model of the dynamic 3D interphase yeast nucleus.
Hua Wong, Hervé Marie-Nelly, Sébastien Herbert, Pascal Carrivain, Hervé Blanc, Romain Koszul, Emmanuelle Fabre, Christophe Zimmer. Curr Biol 2012
96
16

A three-dimensional model of the yeast genome.
Zhijun Duan, Mirela Andronescu, Kevin Schutz, Sean McIlwain, Yoo Jung Kim, Choli Lee, Jay Shendure, Stanley Fields, C Anthony Blau, William S Noble. Nature 2010
604
16

Micro-C XL: assaying chromosome conformation from the nucleosome to the entire genome.
Tsung-Han S Hsieh, Geoffrey Fudenberg, Anton Goloborodko, Oliver J Rando. Nat Methods 2016
65
16

Assembling large DNA segments in yeast.
Héloïse Muller, Narayana Annaluru, Joy Wu Schwerzmann, Sarah M Richardson, Jessica S Dymond, Eric M Cooper, Joel S Bader, Jef D Boeke, Srinivasan Chandrasegaran. Methods Mol Biol 2012
20
16

Mapping Nucleosome Resolution Chromosome Folding in Yeast by Micro-C.
Tsung-Han S Hsieh, Assaf Weiner, Bryan Lajoie, Job Dekker, Nir Friedman, Oliver J Rando. Cell 2015
275
16

Genome-wide mapping of the cohesin complex in the yeast Saccharomyces cerevisiae.
Earl F Glynn, Paul C Megee, Hong-Guo Yu, Cathy Mistrot, Elcin Unal, Douglas E Koshland, Joseph L DeRisi, Jennifer L Gerton. PLoS Biol 2004
325
16

Mechanism and regulation of meiotic recombination initiation.
Isabel Lam, Scott Keeney. Cold Spring Harb Perspect Biol 2014
212
16

SMC complexes differentially compact mitotic chromosomes according to genomic context.
Stephanie Andrea Schalbetter, Anton Goloborodko, Geoffrey Fudenberg, Jon-Matthew Belton, Catrina Miles, Miao Yu, Job Dekker, Leonid Mirny, Jonathan Baxter. Nat Cell Biol 2017
62
16


Total synthesis of a functional designer eukaryotic chromosome.
Narayana Annaluru, Héloïse Muller, Leslie A Mitchell, Sivaprakash Ramalingam, Giovanni Stracquadanio, Sarah M Richardson, Jessica S Dymond, Zheng Kuang, Lisa Z Scheifele, Eric M Cooper,[...]. Science 2014
275
16

Mapping 3D genome architecture through in situ DNase Hi-C.
Vijay Ramani, Darren A Cusanovich, Ronald J Hause, Wenxiu Ma, Ruolan Qiu, Xinxian Deng, C Anthony Blau, Christine M Disteche, William S Noble, Jay Shendure,[...]. Nat Protoc 2016
52
16

Set1 is required for meiotic S-phase onset, double-strand break formation and middle gene expression.
Julie Sollier, Waka Lin, Christine Soustelle, Karsten Suhre, Alain Nicolas, Vincent Géli, Christophe de La Roche Saint-André. EMBO J 2004
98
16

Organization of the mitotic chromosome.
Natalia Naumova, Maxim Imakaev, Geoffrey Fudenberg, Ye Zhan, Bryan R Lajoie, Leonid A Mirny, Job Dekker. Science 2013
509
16

Three-dimensional folding and functional organization principles of the Drosophila genome.
Tom Sexton, Eitan Yaffe, Ephraim Kenigsberg, Frédéric Bantignies, Benjamin Leblanc, Michael Hoichman, Hugues Parrinello, Amos Tanay, Giacomo Cavalli. Cell 2012
16

Purification of G1 daughter cells from different Saccharomycetes species through an optimized centrifugal elutriation procedure.
Martial Marbouty, Caroline Ermont, Bernard Dujon, Guy-Franck Richard, Romain Koszul. Yeast 2014
12
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.