A citation-based method for searching scientific literature

Dal-Hoe Koo, William T Molin, Christopher A Saski, Jiming Jiang, Karthik Putta, Mithila Jugulam, Bernd Friebe, Bikram S Gill. Proc Natl Acad Sci U S A 2018
Times Cited: 75







List of co-cited articles
558 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Gene amplification confers glyphosate resistance in Amaranthus palmeri.
Todd A Gaines, Wenli Zhang, Dafu Wang, Bekir Bukun, Stephen T Chisholm, Dale L Shaner, Scott J Nissen, William L Patzoldt, Patrick J Tranel, A Stanley Culpepper,[...]. Proc Natl Acad Sci U S A 2010
268
42

Extrachromosomal oncogene amplification drives tumour evolution and genetic heterogeneity.
Kristen M Turner, Viraj Deshpande, Doruk Beyter, Tomoyuki Koga, Jessica Rusert, Catherine Lee, Bin Li, Karen Arden, Bing Ren, David A Nathanson,[...]. Nature 2017
257
30

Circular DNA elements of chromosomal origin are common in healthy human somatic tissue.
Henrik Devitt Møller, Marghoob Mohiyuddin, Iñigo Prada-Luengo, M Reza Sailani, Jens Frey Halling, Peter Plomgaard, Lasse Maretty, Anders Johannes Hansen, Michael P Snyder, Henriette Pilegaard,[...]. Nat Commun 2018
96
30

Extrachromosomal circular DNA is common in yeast.
Henrik D Møller, Lance Parsons, Tue S Jørgensen, David Botstein, Birgitte Regenberg. Proc Natl Acad Sci U S A 2015
105
29

Glyphosate resistance: state of knowledge.
Robert Douglas Sammons, Todd A Gaines. Pest Manag Sci 2014
204
29

Extrachromosomal microDNAs and chromosomal microdeletions in normal tissues.
Yoshiyuki Shibata, Pankaj Kumar, Ryan Layer, Smaranda Willcox, Jeffrey R Gagan, Jack D Griffith, Anindya Dutta. Science 2012
128
24

Tandem amplification of a chromosomal segment harboring 5-enolpyruvylshikimate-3-phosphate synthase locus confers glyphosate resistance in Kochia scoparia.
Mithila Jugulam, Kindsey Niehues, Amar S Godar, Dal-Hoe Koo, Tatiana Danilova, Bernd Friebe, Sunish Sehgal, Vijay K Varanasi, Andrew Wiersma, Philip Westra,[...]. Plant Physiol 2014
56
32

Circular ecDNA promotes accessible chromatin and high oncogene expression.
Sihan Wu, Kristen M Turner, Nam Nguyen, Ramya Raviram, Marcella Erb, Jennifer Santini, Jens Luebeck, Utkrisht Rajkumar, Yarui Diao, Bin Li,[...]. Nature 2019
133
24

Normal and Cancerous Tissues Release Extrachromosomal Circular DNA (eccDNA) into the Circulation.
Pankaj Kumar, Laura W Dillon, Yoshiyuki Shibata, Amir A Jazaeri, David R Jones, Anindya Dutta. Mol Cancer Res 2017
85
22



Intricate and Cell Type-Specific Populations of Endogenous Circular DNA (eccDNA) in Caenorhabditis elegans and Homo sapiens.
Massa J Shoura, Idan Gabdank, Loren Hansen, Jason Merker, Jason Gotlib, Stephen D Levene, Andrew Z Fire. G3 (Bethesda) 2017
43
32

Discoveries of Extrachromosomal Circles of DNA in Normal and Tumor Cells.
Teressa Paulsen, Pankaj Kumar, M Murat Koseoglu, Anindya Dutta. Trends Genet 2018
68
20


Evolution in action: plants resistant to herbicides.
Stephen B Powles, Qin Yu. Annu Rev Plant Biol 2010
512
18

Targeted therapy resistance mediated by dynamic regulation of extrachromosomal mutant EGFR DNA.
David A Nathanson, Beatrice Gini, Jack Mottahedeh, Koppany Visnyei, Tomoyuki Koga, German Gomez, Ascia Eskin, Kiwook Hwang, Jun Wang, Kenta Masui,[...]. Science 2014
300
18

Adaptation to diverse nitrogen-limited environments by deletion or extrachromosomal element formation of the GAP1 locus.
David Gresham, Renata Usaite, Susanne Manuela Germann, Michael Lisby, David Botstein, Birgitte Regenberg. Proc Natl Acad Sci U S A 2010
72
18



Transcription-induced formation of extrachromosomal DNA during yeast ageing.
Ryan M Hull, Michelle King, Grazia Pizza, Felix Krueger, Xabier Vergara, Jonathan Houseley. PLoS Biol 2019
36
36

Production of Extrachromosomal MicroDNAs Is Linked to Mismatch Repair Pathways and Transcriptional Activity.
Laura W Dillon, Pankaj Kumar, Yoshiyuki Shibata, Yuh-Hwa Wang, Smaranda Willcox, Jack D Griffith, Yves Pommier, Shunichi Takeda, Anindya Dutta. Cell Rep 2015
67
17


Glyphosate Resistance and EPSPS Gene Duplication: Convergent Evolution in Multiple Plant Species.
Eric L Patterson, Dean J Pettinga, Karl Ravet, Paul Neve, Todd A Gaines. J Hered 2018
26
46

Characterization of glyphosate resistance in Amaranthus tuberculatus populations.
Lothar Lorentz, Todd A Gaines, Scott J Nissen, Philip Westra, Harry J Strek, Heinz W Dehne, Juan Pedro Ruiz-Santaella, Roland Beffa. J Agric Food Chem 2014
45
26


Extrachromosomal circular DNA drives oncogenic genome remodeling in neuroblastoma.
Richard P Koche, Elias Rodriguez-Fos, Konstantin Helmsauer, Martin Burkert, Ian C MacArthur, Jesper Maag, Rocio Chamorro, Natalia Munoz-Perez, Montserrat Puiggròs, Heathcliff Dorado Garcia,[...]. Nat Genet 2020
81
16

Sequencing the extrachromosomal circular mobilome reveals retrotransposon activity in plants.
Sophie Lanciano, Marie-Christine Carpentier, Christel Llauro, Edouard Jobet, Dagmara Robakowska-Hyzorek, Eric Lasserre, Alain Ghesquière, Olivier Panaud, Marie Mirouze. PLoS Genet 2017
58
18


EPSPS gene amplification in glyphosate-resistant Italian ryegrass (Lolium perenne ssp. multiflorum) from Arkansas.
Reiofeli A Salas, Franck E Dayan, Zhiqiang Pan, Susan B Watson, James W Dickson, Robert C Scott, Nilda R Burgos. Pest Manag Sci 2012
77
14


Multiple modes of convergent adaptation in the spread of glyphosate-resistant Amaranthus tuberculatus.
Julia M Kreiner, Darci Ann Giacomini, Felix Bemm, Bridgit Waithaka, Julian Regalado, Christa Lanz, Julia Hildebrandt, Peter H Sikkema, Patrick J Tranel, Detlef Weigel,[...]. Proc Natl Acad Sci U S A 2019
40
27

Mechanisms of evolved herbicide resistance.
Todd A Gaines, Stephen O Duke, Sarah Morran, Carlos A G Rigon, Patrick J Tranel, Anita Küpper, Franck E Dayan. J Biol Chem 2020
86
14

Formation of Extrachromosomal Circular DNA from Long Terminal Repeats of Retrotransposons in Saccharomyces cerevisiae.
Henrik D Møller, Camilla E Larsen, Lance Parsons, Anders Johannes Hansen, Birgitte Regenberg, Tobias Mourier. G3 (Bethesda) 2015
26
38

A codon deletion confers resistance to herbicides inhibiting protoporphyrinogen oxidase.
William L Patzoldt, Aaron G Hager, Joel S McCormick, Patrick J Tranel. Proc Natl Acad Sci U S A 2006
70
14

Key role for a glutathione transferase in multiple-herbicide resistance in grass weeds.
Ian Cummins, David J Wortley, Federico Sabbadin, Zhesi He, Christopher R Coxon, Hannah E Straker, Jonathan D Sellars, Kathryn Knight, Lesley Edwards, David Hughes,[...]. Proc Natl Acad Sci U S A 2013
135
13

Gene amplification of 5-enol-pyruvylshikimate-3-phosphate synthase in glyphosate-resistant Kochia scoparia.
Andrew T Wiersma, Todd A Gaines, Christopher Preston, John P Hamilton, Darci Giacomini, C Robin Buell, Jan E Leach, Philip Westra. Planta 2015
53
18

Gene amplification as double minutes or homogeneously staining regions in solid tumors: origin and structure.
Clelia Tiziana Storlazzi, Angelo Lonoce, Maria C Guastadisegni, Domenico Trombetta, Pietro D'Addabbo, Giulia Daniele, Alberto L'Abbate, Gemma Macchia, Cecilia Surace, Klaas Kok,[...]. Genome Res 2010
119
13

Deciphering the evolution of herbicide resistance in weeds.
Christophe Délye, Marie Jasieniuk, Valérie Le Corre. Trends Genet 2013
186
13

A novel triple amino acid substitution in the EPSPS found in a high-level glyphosate-resistant Amaranthus hybridus population from Argentina.
Valeria E Perotti, Alvaro S Larran, Valeria E Palmieri, Andrea K Martinatto, Clarisa E Alvarez, Daniel Tuesca, Hugo R Permingeat. Pest Manag Sci 2019
28
35

MINUTE CHROMATIN BODIES IN MALIGNANT TUMOURS OF CHILDHOOD.
D COX, C YUNCKEN, A I SPRIGGS. Lancet 1965
203
13

Physical Mapping of Amplified Copies of the 5-Enolpyruvylshikimate-3-Phosphate Synthase Gene in Glyphosate-Resistant Amaranthus tuberculatus.
Andrew Dillon, Vijay K Varanasi, Tatiana V Danilova, Dal-Hoe Koo, Sridevi Nakka, Dallas E Peterson, Patrick J Tranel, Bernd Friebe, Bikram S Gill, Mithila Jugulam. Plant Physiol 2017
32
31

Overview of glyphosate-resistant weeds worldwide.
Ian Heap, Stephen O Duke. Pest Manag Sci 2018
105
13

Small extrachromosomal circular DNAs, microDNA, produce short regulatory RNAs that suppress gene expression independent of canonical promoters.
Teressa Paulsen, Yoshiyuki Shibata, Pankaj Kumar, Laura Dillon, Anindya Dutta. Nucleic Acids Res 2019
31
32

Extrachromosomal DNA is associated with oncogene amplification and poor outcome across multiple cancers.
Hoon Kim, Nam-Phuong Nguyen, Kristen Turner, Sihan Wu, Amit D Gujar, Jens Luebeck, Jihe Liu, Viraj Deshpande, Utkrisht Rajkumar, Sandeep Namburi,[...]. Nat Genet 2020
81
13

Discordant inheritance of chromosomal and extrachromosomal DNA elements contributes to dynamic disease evolution in glioblastoma.
Ana C deCarvalho, Hoon Kim, Laila M Poisson, Mary E Winn, Claudius Mueller, David Cherba, Julie Koeman, Sahil Seth, Alexei Protopopov, Michelle Felicella,[...]. Nat Genet 2018
113
12

Extrachromosomal circular DNA of tandemly repeated genomic sequences in Drosophila.
Sarit Cohen, Keren Yacobi, Daniel Segal. Genome Res 2003
88
12


Glyphosate resistance in Ambrosia trifida: Part 1. Novel rapid cell death response to glyphosate.
Christopher R Van Horn, Marcelo L Moretti, Renae R Robertson, Kabelo Segobye, Stephen C Weller, Bryan G Young, William G Johnson, Burkhard Schulz, Amanda C Green, Taylor Jeffery,[...]. Pest Manag Sci 2018
21
42

Glyphosate resistance in Ambrosia trifida: Part 2. Rapid response physiology and non-target-site resistance.
Marcelo L Moretti, Christopher R Van Horn, Renae Robertson, Kabelo Segobye, Stephen C Weller, Bryan G Young, William G Johnson, R Douglas Sammons, Dafu Wang, Xia Ge,[...]. Pest Manag Sci 2018
20
45

EPSPS gene amplification in glyphosate-resistant Bromus diandrus.
Jenna M Malone, Sarah Morran, Neil Shirley, Peter Boutsalis, Christopher Preston. Pest Manag Sci 2016
43
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.