A citation-based method for searching scientific literature

Emanuela Ruggiero, Sara N Richter. Nucleic Acids Res 2018
Times Cited: 159







List of co-cited articles
1042 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


G-quadruplexes and their regulatory roles in biology.
Daniela Rhodes, Hans J Lipps. Nucleic Acids Res 2015
707
33

Quadruplex DNA: sequence, topology and structure.
Sarah Burge, Gary N Parkinson, Pascale Hazel, Alan K Todd, Stephen Neidle. Nucleic Acids Res 2006
25

G-quadruplexes in viruses: function and potential therapeutic applications.
Mathieu Métifiot, Samir Amrane, Simon Litvak, Marie-Line Andreola. Nucleic Acids Res 2014
131
23

QGRS Mapper: a web-based server for predicting G-quadruplexes in nucleotide sequences.
Oleg Kikin, Lawrence D'Antonio, Paramjeet S Bagga. Nucleic Acids Res 2006
467
23

Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription.
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
21


G-quadruplex forming sequences in the genome of all known human viruses: A comprehensive guide.
Enrico Lavezzo, Michele Berselli, Ilaria Frasson, Rosalba Perrone, Giorgio Palù, Alessandra R Brazzale, Sara N Richter, Stefano Toppo. PLoS Comput Biol 2018
49
40

The regulation and functions of DNA and RNA G-quadruplexes.
Dhaval Varshney, Jochen Spiegel, Katherine Zyner, David Tannahill, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2020
178
20

Prevalence of quadruplexes in the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2005
19

Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?
Shankar Balasubramanian, Laurence H Hurley, Stephen Neidle. Nat Rev Drug Discov 2011
18

G-quadruplexes regulate Epstein-Barr virus-encoded nuclear antigen 1 mRNA translation.
Pierre Murat, Jie Zhong, Lea Lekieffre, Nathan P Cowieson, Jennifer L Clancy, Thomas Preiss, Shankar Balasubramanian, Rajiv Khanna, Judy Tellam. Nat Chem Biol 2014
146
17

High-throughput sequencing of DNA G-quadruplex structures in the human genome.
Vicki S Chambers, Giovanni Marsico, Jonathan M Boutell, Marco Di Antonio, Geoffrey P Smith, Shankar Balasubramanian. Nat Biotechnol 2015
537
17

Re-evaluation of G-quadruplex propensity with G4Hunter.
Amina Bedrat, Laurent Lacroix, Jean-Louis Mergny. Nucleic Acids Res 2016
260
17

G-quadruplex structures mark human regulatory chromatin.
Robert Hänsel-Hertsch, Dario Beraldi, Stefanie V Lensing, Giovanni Marsico, Katherine Zyner, Aled Parry, Marco Di Antonio, Jeremy Pike, Hiroshi Kimura, Masashi Narita,[...]. Nat Genet 2016
353
16

DNA G-quadruplexes in the human genome: detection, functions and therapeutic potential.
Robert Hänsel-Hertsch, Marco Di Antonio, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2017
380
16

Quantitative visualization of DNA G-quadruplex structures in human cells.
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
16

Chemical Targeting of a G-Quadruplex RNA in the Ebola Virus L Gene.
Shao-Ru Wang, Qiu-Yan Zhang, Jia-Qi Wang, Xing-Yi Ge, Yan-Yan Song, Ya-Fen Wang, Xiao-Dan Li, Bo-Shi Fu, Guo-Hua Xu, Bo Shu,[...]. Cell Chem Biol 2016
58
25

A highly conserved G-rich consensus sequence in hepatitis C virus core gene represents a new anti-hepatitis C target.
Shao-Ru Wang, Yuan-Qin Min, Jia-Qi Wang, Chao-Xing Liu, Bo-Shi Fu, Fan Wu, Ling-Yu Wu, Zhi-Xian Qiao, Yan-Yan Song, Guo-Hua Xu,[...]. Sci Adv 2016
63
23

Zika Virus Genomic RNA Possesses Conserved G-Quadruplexes Characteristic of the Flaviviridae Family.
Aaron M Fleming, Yun Ding, Anton Alenko, Cynthia J Burrows. ACS Infect Dis 2016
71
21

G-quadruplexes in pathogens: a common route to virulence control?
Lynne M Harris, Catherine J Merrick. PLoS Pathog 2015
72
20

Viral G-quadruplexes: New frontiers in virus pathogenesis and antiviral therapy.
Emanuela Ruggiero, Sara N Richter. Annu Rep Med Chem 2020
29
51

Targeting RNA G-Quadruplex in SARS-CoV-2: A Promising Therapeutic Target for COVID-19?
Chuanqi Zhao, Geng Qin, Jingsheng Niu, Zhao Wang, Chunyu Wang, Jinsong Ren, Xiaogang Qu. Angew Chem Int Ed Engl 2021
33
45

A dynamic G-quadruplex region regulates the HIV-1 long terminal repeat promoter.
Rosalba Perrone, Matteo Nadai, Ilaria Frasson, Jerrod A Poe, Elena Butovskaya, Thomas E Smithgall, Manlio Palumbo, Giorgio Palù, Sara N Richter. J Med Chem 2013
108
14

The Herpes Simplex Virus-1 genome contains multiple clusters of repeated G-quadruplex: Implications for the antiviral activity of a G-quadruplex ligand.
Sara Artusi, Matteo Nadai, Rosalba Perrone, Maria Angela Biasolo, Giorgio Palù, Louis Flamand, Arianna Calistri, Sara N Richter. Antiviral Res 2015
77
18

Recent Progress of Targeted G-Quadruplex-Preferred Ligands Toward Cancer Therapy.
Sefan Asamitsu, Shunsuke Obata, Zutao Yu, Toshikazu Bando, Hiroshi Sugiyama. Molecules 2019
116
14

Nucleolin stabilizes G-quadruplex structures folded by the LTR promoter and silences HIV-1 viral transcription.
Elena Tosoni, Ilaria Frasson, Matteo Scalabrin, Rosalba Perrone, Elena Butovskaya, Matteo Nadai, Giorgio Palù, Dan Fabris, Sara N Richter. Nucleic Acids Res 2015
74
17

Anti-HIV-1 activity of the G-quadruplex ligand BRACO-19.
Rosalba Perrone, Elena Butovskaya, Dirk Daelemans, Giorgio Palù, Christophe Pannecouque, Sara N Richter. J Antimicrob Chemother 2014
73
17

G-Quadruplexes: More Than Just a Kink in Microbial Genomes.
Nandhini Saranathan, Perumal Vivekanandan. Trends Microbiol 2019
47
27

Visualization and selective chemical targeting of RNA G-quadruplex structures in the cytoplasm of human cells.
Giulia Biffi, Marco Di Antonio, David Tannahill, Shankar Balasubramanian. Nat Chem 2014
336
12

A novel small molecule that alters shelterin integrity and triggers a DNA-damage response at telomeres.
Raphaël Rodriguez, Sebastian Müller, Justin A Yeoman, Chantal Trentesaux, Jean-François Riou, Shankar Balasubramanian. J Am Chem Soc 2008
247
12

Metal Cations in G-Quadruplex Folding and Stability.
Debmalya Bhattacharyya, Gayan Mirihana Arachchilage, Soumitra Basu. Front Chem 2016
209
12


G-Quadruplex Secondary Structure Obtained from Circular Dichroism Spectroscopy.
Rafael Del Villar-Guerra, John O Trent, Jonathan B Chaires. Angew Chem Int Ed Engl 2018
150
12

Highly prevalent putative quadruplex sequence motifs in human DNA.
Alan K Todd, Matthew Johnston, Stephen Neidle. Nucleic Acids Res 2005
670
12

Whole genome experimental maps of DNA G-quadruplexes in multiple species.
Giovanni Marsico, Vicki S Chambers, Aleksandr B Sahakyan, Patrick McCauley, Jonathan M Boutell, Marco Di Antonio, Shankar Balasubramanian. Nucleic Acids Res 2019
107
12

RNA G-Quadruplexes in Biology: Principles and Molecular Mechanisms.
Marta M Fay, Shawn M Lyons, Pavel Ivanov. J Mol Biol 2017
174
12

Chemical and structural studies provide a mechanistic basis for recognition of the MYC G-quadruplex.
David R Calabrese, Xiang Chen, Elena C Leon, Snehal M Gaikwad, Zaw Phyo, William M Hewitt, Stephanie Alden, Thomas A Hilimire, Fahu He, Aleksandra M Michalowski,[...]. Nat Commun 2018
66
18

CX-5461 is a DNA G-quadruplex stabilizer with selective lethality in BRCA1/2 deficient tumours.
Hong Xu, Marco Di Antonio, Steven McKinney, Veena Mathew, Brandon Ho, Nigel J O'Neil, Nancy Dos Santos, Jennifer Silvester, Vivien Wei, Jessica Garcia,[...]. Nat Commun 2017
209
12

G-quadruplex, Friend or Foe: The Role of the G-quartet in Anticancer Strategies.
Josué Carvalho, Jean-Louis Mergny, Gilmar F Salgado, João A Queiroz, Carla Cruz. Trends Mol Med 2020
57
21

Formation of a unique cluster of G-quadruplex structures in the HIV-1 Nef coding region: implications for antiviral activity.
Rosalba Perrone, Matteo Nadai, Jerrod A Poe, Ilaria Frasson, Manlio Palumbo, Giorgio Palù, Thomas E Smithgall, Sara N Richter. PLoS One 2013
66
16

The G-quadruplex-interactive molecule BRACO-19 inhibits tumor growth, consistent with telomere targeting and interference with telomerase function.
Angelika M Burger, Fangping Dai, Christoph M Schultes, Anthony P Reszka, Michael J Moore, John A Double, Stephen Neidle. Cancer Res 2005
375
11

5'-UTR RNA G-quadruplexes: translation regulation and targeting.
Anthony Bugaut, Shankar Balasubramanian. Nucleic Acids Res 2012
399
11



Human papillomavirus G-quadruplexes.
Katarína Tlučková, Maja Marušič, Petra Tóthová, Lubos Bauer, Primož Šket, Janez Plavec, Viktor Viglasky. Biochemistry 2013
65
16

Characterization of highly conserved G-quadruplex motifs as potential drug targets in Streptococcus pneumoniae.
Subodh Kumar Mishra, Neha Jain, Uma Shankar, Arpita Tawani, Tarun Kumar Sharma, Amit Kumar. Sci Rep 2019
20
55


DNA secondary structures: stability and function of G-quadruplex structures.
Matthew L Bochman, Katrin Paeschke, Virginia A Zakian. Nat Rev Genet 2012
743
11

The Structure and Function of DNA G-Quadruplexes.
Jochen Spiegel, Santosh Adhikari, Shankar Balasubramanian. Trends Chem 2020
140
11

Discovery of G-quadruplex-forming sequences in SARS-CoV-2.
Danyang Ji, Mario Juhas, Chi Man Tsang, Chun Kit Kwok, Yongshu Li, Yang Zhang. Brief Bioinform 2021
23
47


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.