A citation-based method for searching scientific literature

Sabrina Kragness, Mark A A Harrison, Joby J Westmoreland, Adam Burstain, Laurie R Earls. Gene Expr Patterns 2018
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Transcription of human endogenous retroviruses in human brain by RNA-seq analysis.
Fang Li, Sarven Sabunciyan, Robert H Yolken, Doheon Lee, Sanghyeon Kim, Håkan Karlsson. PLoS One 2019
15
100



ZFHX1B mutations in patients with Mowat-Wilson syndrome.
Florence Dastot-Le Moal, Meredith Wilson, David Mowat, Nathalie Collot, Florence Niel, Michel Goossens. Hum Mutat 2007
106
100

Quantitative profiling of peptides from RNAs classified as noncoding.
Sudhakaran Prabakaran, Martin Hemberg, Ruchi Chauhan, Dominic Winter, Ry Y Tweedie-Cullen, Christian Dittrich, Elizabeth Hong, Jeremy Gunawardena, Hanno Steen, Gabriel Kreiman,[...]. Nat Commun 2014
34
100

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
Mark D Robinson, Davis J McCarthy, Gordon K Smyth. Bioinformatics 2010
100

Schizophrenia as a complex trait: evidence from a meta-analysis of twin studies.
Patrick F Sullivan, Kenneth S Kendler, Michael C Neale. Arch Gen Psychiatry 2003
100

Human Accelerated Regions and Other Human-Specific Sequence Variations in the Context of Evolution and Their Relevance for Brain Development.
Anastasia Levchenko, Alexander Kanapin, Anastasia Samsonova, Raul R Gainetdinov. Genome Biol Evol 2018
21
100


Human-chimpanzee differences in a FZD8 enhancer alter cell-cycle dynamics in the developing neocortex.
J Lomax Boyd, Stephanie L Skove, Jeremy P Rouanet, Louis-Jan Pilaz, Tristan Bepler, Raluca Gordân, Gregory A Wray, Debra L Silver. Curr Biol 2015
110
100

Can a few non-coding mutations make a human brain?
Lucía F Franchini, Katherine S Pollard. Bioessays 2015
13
100

Many human accelerated regions are developmental enhancers.
John A Capra, Genevieve D Erwin, Gabriel McKinsey, John L R Rubenstein, Katherine S Pollard. Philos Trans R Soc Lond B Biol Sci 2013
94
100

Fast-evolving noncoding sequences in the human genome.
Christine P Bird, Barbara E Stranger, Maureen Liu, Daryl J Thomas, Catherine E Ingle, Claude Beazley, Webb Miller, Matthew E Hurles, Emmanouil T Dermitzakis. Genome Biol 2007
99
100


The Dfam community resource of transposable element families, sequence models, and genome annotations.
Jessica Storer, Robert Hubley, Jeb Rosen, Travis J Wheeler, Arian F Smit. Mob DNA 2021
25
100

Somatic mutation, genomic variation, and neurological disease.
Annapurna Poduri, Gilad D Evrony, Xuyu Cai, Christopher A Walsh. Science 2013
335
100

Avogadro: an advanced semantic chemical editor, visualization, and analysis platform.
Marcus D Hanwell, Donald E Curtis, David C Lonie, Tim Vandermeersch, Eva Zurek, Geoffrey R Hutchison. J Cheminform 2012
100

Epigenetic remodelling and dysregulation of DLGAP4 is linked with early-onset cerebellar ataxia.
Sheroy Minocherhomji, Claus Hansen, Hyung-Goo Kim, Yuan Mang, Mads Bak, Per Guldberg, Nickolas Papadopoulos, Hans Eiberg, Gerald Dayebga Doh, Kjeld Møllgård,[...]. Hum Mol Genet 2014
14
100


Adaptive evolution of genes underlying schizophrenia.
Bernard Crespi, Kyle Summers, Steve Dorus. Proc Biol Sci 2007
90
100

The PsychENCODE project.
Schahram Akbarian, Chunyu Liu, James A Knowles, Flora M Vaccarino, Peggy J Farnham, Gregory E Crawford, Andrew E Jaffe, Dalila Pinto, Stella Dracheva, Daniel H Geschwind,[...]. Nat Neurosci 2015
178
100

Forces shaping the fastest evolving regions in the human genome.
Katherine S Pollard, Sofie R Salama, Bryan King, Andrew D Kern, Tim Dreszer, Sol Katzman, Adam Siepel, Jakob S Pedersen, Gill Bejerano, Robert Baertsch,[...]. PLoS Genet 2006
258
100

Molecular characteristics of Human Endogenous Retrovirus type-W in schizophrenia and bipolar disorder.
H Perron, N Hamdani, R Faucard, M Lajnef, S Jamain, C Daban-Huard, S Sarrazin, E LeGuen, J Houenou, M Delavest,[...]. Transl Psychiatry 2012
66
100

PLINK: a tool set for whole-genome association and population-based linkage analyses.
Shaun Purcell, Benjamin Neale, Kathe Todd-Brown, Lori Thomas, Manuel A R Ferreira, David Bender, Julian Maller, Pamela Sklar, Paul I W de Bakker, Mark J Daly,[...]. Am J Hum Genet 2007
100

Accelerated evolution of conserved noncoding sequences in humans.
Shyam Prabhakar, James P Noonan, Svante Pääbo, Edward M Rubin. Science 2006
249
100

InterProScan 5: genome-scale protein function classification.
Philip Jones, David Binns, Hsin-Yu Chang, Matthew Fraser, Weizhong Li, Craig McAnulla, Hamish McWilliam, John Maslen, Alex Mitchell, Gift Nuka,[...]. Bioinformatics 2014
100

Pan-cancer analysis of transcripts encoding novel open-reading frames (nORFs) and their potential biological functions.
Chaitanya Erady, Adam Boxall, Shraddha Puntambekar, N Suhas Jagannathan, Ruchi Chauhan, David Chong, Narendra Meena, Apurv Kulkarni, Bhagyashri Kasabe, Kethaki Prathivadi Bhayankaram,[...]. NPJ Genom Med 2021
5
100

The heritability of bipolar affective disorder and the genetic relationship to unipolar depression.
Peter McGuffin, Fruhling Rijsdijk, Martin Andrew, Pak Sham, Randy Katz, Alastair Cardno. Arch Gen Psychiatry 2003
744
100

Evolution of transcriptional enhancers and animal diversity.
Marcelo Rubinstein, Flávio S J de Souza. Philos Trans R Soc Lond B Biol Sci 2013
38
100

Transposable Elements and Their KRAB-ZFP Controllers Regulate Gene Expression in Adult Tissues.
Gabriela Ecco, Marco Cassano, Annamaria Kauzlaric, Julien Duc, Andrea Coluccio, Sandra Offner, Michaël Imbeault, Helen M Rowe, Priscilla Turelli, Didier Trono. Dev Cell 2016
103
100

RNA silencing and genome regulation.
Ricardo Almeida, Robin C Allshire. Trends Cell Biol 2005
160
100

Human brain evolution: from gene discovery to phenotype discovery.
Todd M Preuss. Proc Natl Acad Sci U S A 2012
38
100

Pleiotropic and diverse expression of ZFHX1B gene transcripts during mouse and human development supports the various clinical manifestations of the "Mowat-Wilson" syndrome.
Guillaume Bassez, Olivier J A Camand, Valère Cacheux, Alexandra Kobetz, Florence Dastot-Le Moal, Dominique Marchant, Martin Catala, Marc Abitbol, Michel Goossens. Neurobiol Dis 2004
36
100

Smaug1 mRNA-silencing foci respond to NMDA and modulate synapse formation.
María Verónica Baez, Luciana Luchelli, Darío Maschi, Martín Habif, Malena Pascual, María Gabriela Thomas, Graciela Lidia Boccaccio. J Cell Biol 2011
37
100

The evolution of lineage-specific clusters of single nucleotide substitutions in the human genome.
Ke Xu, Jianrong Wang, Navin Elango, Soojin V Yi. Mol Phylogenet Evol 2013
3
100

Genomic and network patterns of schizophrenia genetic variation in human evolutionary accelerated regions.
Ke Xu, Eric E Schadt, Katherine S Pollard, Panos Roussos, Joel T Dudley. Mol Biol Evol 2015
51
100

RPFdb v2.0: an updated database for genome-wide information of translated mRNA generated from ribosome profiling.
Hongwei Wang, Ludong Yang, Yan Wang, Leshi Chen, Huihui Li, Zhi Xie. Nucleic Acids Res 2019
21
100

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update.
Vahid Jalili, Enis Afgan, Qiang Gu, Dave Clements, Daniel Blankenberg, Jeremy Goecks, James Taylor, Anton Nekrutenko. Nucleic Acids Res 2020
69
100

LINE1 insertions as a genomic risk factor for schizophrenia: Preliminary evidence from an affected family.
Guia Guffanti, Simona Gaudi, Torsten Klengel, James H Fallon, Harry Mangalam, Ravi Madduri, Alex Rodriguez, Paula DeCrescenzo, Emily Glovienka, Janet Sobell,[...]. Am J Med Genet B Neuropsychiatr Genet 2016
22
100



Regulatory activities of transposable elements: from conflicts to benefits.
Edward B Chuong, Nels C Elde, Cédric Feschotte. Nat Rev Genet 2017
494
100


Transposable elements and psychiatric disorders.
Guia Guffanti, Simona Gaudi, James H Fallon, Janet Sobell, Steven G Potkin, Carlos Pato, Fabio Macciardi. Am J Med Genet B Neuropsychiatr Genet 2014
24
100

Common schizophrenia alleles are enriched in mutation-intolerant genes and in regions under strong background selection.
Antonio F Pardiñas, Peter Holmans, Andrew J Pocklington, Valentina Escott-Price, Stephan Ripke, Noa Carrera, Sophie E Legge, Sophie Bishop, Darren Cameron, Marian L Hamshere,[...]. Nat Genet 2018
580
100

Evolutionary divergence of novel open reading frames in cichlids speciation.
Shraddha Puntambekar, Rachel Newhouse, Jaime San-Miguel, Ruchi Chauhan, Grégoire Vernaz, Thomas Willis, Matthew T Wayland, Yagnesh Umrania, Eric A Miska, Sudhakaran Prabakaran. Sci Rep 2020
2
100

Novel Bioinformatics Approach Identifies Transcriptional Profiles of Lineage-Specific Transposable Elements at Distinct Loci in the Human Dorsolateral Prefrontal Cortex.
Guia Guffanti, Andrew Bartlett, Torsten Klengel, Claudia Klengel, Richard Hunter, Gennadi Glinsky, Fabio Macciardi. Mol Biol Evol 2018
17
100

An early cell shape transition drives evolutionary expansion of the human forebrain.
Silvia Benito-Kwiecinski, Stefano L Giandomenico, Magdalena Sutcliffe, Erlend S Riis, Paula Freire-Pritchett, Iva Kelava, Stephanie Wunderlich, Ulrich Martin, Gregory A Wray, Kate McDole,[...]. Cell 2021
24
100

GLANET: genomic loci annotation and enrichment tool.
Burçak Otlu, Can Firtina, Sündüz Keles, Oznur Tastan. Bioinformatics 2017
7
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.