A citation-based method for searching scientific literature

Georgia Kontogianni, Georgia Piroti, Ilias Maglogiannis, Aristotelis Chatziioannou, Olga Papadodima. Cancers (Basel) 2018
Times Cited: 4







List of co-cited articles
6 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A landscape of driver mutations in melanoma.
Eran Hodis, Ian R Watson, Gregory V Kryukov, Stefan T Arold, Marcin Imielinski, Jean-Philippe Theurillat, Elizabeth Nickerson, Daniel Auclair, Liren Li, Chelsea Place,[...]. Cell 2012
100

Exome sequencing identifies GRIN2A as frequently mutated in melanoma.
Xiaomu Wei, Vijay Walia, Jimmy C Lin, Jamie K Teer, Todd D Prickett, Jared Gartner, Sean Davis, Katherine Stemke-Hale, Michael A Davies, Jeffrey E Gershenwald,[...]. Nat Genet 2011
365
75

Exome sequencing identifies recurrent somatic RAC1 mutations in melanoma.
Michael Krauthammer, Yong Kong, Byung Hak Ha, Perry Evans, Antonella Bacchiocchi, James P McCusker, Elaine Cheng, Matthew J Davis, Gerald Goh, Murim Choi,[...]. Nat Genet 2012
823
75


Whole-exome sequencing reveals novel genetic variants associated with diverse phenotypes of melanoma cells.
Mariusz L Hartman, Malgorzata Sztiller-Sikorska, Malgorzata Czyz. Mol Carcinog 2019
22
50

The role of the PI3K-AKT pathway in melanoma.
Michael A Davies. Cancer J 2012
140
50

Computational identification of deleterious synonymous variants in human genomes using a feature-based approach.
Fang Shi, Yao Yao, Yannan Bin, Chun-Hou Zheng, Junfeng Xia. BMC Med Genomics 2019
27
25

Computational approaches to identify functional genetic variants in cancer genomes.
Abel Gonzalez-Perez, Ville Mustonen, Boris Reva, Graham R S Ritchie, Pau Creixell, Rachel Karchin, Miguel Vazquez, J Lynn Fink, Karin S Kassahn, John V Pearson,[...]. Nat Methods 2013
117
25


Genic intolerance to functional variation and the interpretation of personal genomes.
Slavé Petrovski, Quanli Wang, Erin L Heinzen, Andrew S Allen, David B Goldstein. PLoS Genet 2013
596
25

Synonymous mutations frequently act as driver mutations in human cancers.
Fran Supek, Belén Miñana, Juan Valcárcel, Toni Gabaldón, Ben Lehner. Cell 2014
334
25


RNA splicing. The human splicing code reveals new insights into the genetic determinants of disease.
Hui Y Xiong, Babak Alipanahi, Leo J Lee, Hannes Bretschneider, Daniele Merico, Ryan K C Yuen, Yimin Hua, Serge Gueroussov, Hamed S Najafabadi, Timothy R Hughes,[...]. Science 2015
598
25


Palladium based nanoparticles for the treatment of advanced melanoma.
Justin Elsey, Jeffrey A Bubley, Lei Zhu, Shikha Rao, Maiko Sasaki, Brian P Pollack, Lily Yang, Jack L Arbiser. Sci Rep 2019
5
25

Systematic localization of common disease-associated variation in regulatory DNA.
Matthew T Maurano, Richard Humbert, Eric Rynes, Robert E Thurman, Eric Haugen, Hao Wang, Alex P Reynolds, Richard Sandstrom, Hongzhu Qu, Jennifer Brody,[...]. Science 2012
25

Understanding the contribution of synonymous mutations to human disease.
Zuben E Sauna, Chava Kimchi-Sarfaty. Nat Rev Genet 2011
567
25


Single-strand DNA library preparation improves sequencing of formalin-fixed and paraffin-embedded (FFPE) cancer DNA.
Mathias Stiller, Antje Sucker, Klaus Griewank, Daniela Aust, Gustavo Bruno Baretton, Dirk Schadendorf, Susanne Horn. Oncotarget 2016
15
25

Quantitative evaluation of all hexamers as exonic splicing elements.
Shengdong Ke, Shulian Shang, Sergey M Kalachikov, Irina Morozova, Lin Yu, James J Russo, Jingyue Ju, Lawrence A Chasin. Genome Res 2011
140
25

COSMIC: exploring the world's knowledge of somatic mutations in human cancer.
Simon A Forbes, David Beare, Prasad Gunasekaran, Kenric Leung, Nidhi Bindal, Harry Boutselakis, Minjie Ding, Sally Bamford, Charlotte Cole, Sari Ward,[...]. Nucleic Acids Res 2015
25

Kinase suppressor of Ras 2 (KSR2) regulates tumor cell transformation via AMPK.
Mario R Fernandez, MaLinda D Henry, Robert E Lewis. Mol Cell Biol 2012
44
25

Universal Patterns of Selection in Cancer and Somatic Tissues.
Iñigo Martincorena, Keiran M Raine, Moritz Gerstung, Kevin J Dawson, Kerstin Haase, Peter Van Loo, Helen Davies, Michael R Stratton, Peter J Campbell. Cell 2017
508
25

Patterns of somatic mutation in human cancer genomes.
Christopher Greenman, Philip Stephens, Raffaella Smith, Gillian L Dalgliesh, Christopher Hunter, Graham Bignell, Helen Davies, Jon Teague, Adam Butler, Claire Stevens,[...]. Nature 2007
25

Ion channels and transporters in the development of drug resistance in cancer cells.
Else K Hoffmann, Ian H Lambert. Philos Trans R Soc Lond B Biol Sci 2014
69
25

De Novo Synonymous Mutations in Regulatory Elements Contribute to the Genetic Etiology of Autism and Schizophrenia.
Atsushi Takata, Iuliana Ionita-Laza, Joseph A Gogos, Bin Xu, Maria Karayiorgou. Neuron 2016
82
25

High-performance web services for querying gene and variant annotation.
Jiwen Xin, Adam Mark, Cyrus Afrasiabi, Ginger Tsueng, Moritz Juchler, Nikhil Gopal, Gregory S Stupp, Timothy E Putman, Benjamin J Ainscough, Obi L Griffith,[...]. Genome Biol 2016
93
25

Novel somatic and germline mutations in cancer candidate genes in glioblastoma, melanoma, and pancreatic carcinoma.
Asha Balakrishnan, Fonnet E Bleeker, Simona Lamba, Monica Rodolfo, Maria Daniotti, Aldo Scarpa, Angela A van Tilborg, Sieger Leenstra, Carlo Zanon, Alberto Bardelli. Cancer Res 2007
125
25

The Ensembl Variant Effect Predictor.
William McLaren, Laurent Gil, Sarah E Hunt, Harpreet Singh Riat, Graham R S Ritchie, Anja Thormann, Paul Flicek, Fiona Cunningham. Genome Biol 2016
25

The evolution, impact and properties of exonic splice enhancers.
Eva Fernández Cáceres, Laurence D Hurst. Genome Biol 2013
62
25

Listening to silence and understanding nonsense: exonic mutations that affect splicing.
Luca Cartegni, Shern L Chew, Adrian R Krainer. Nat Rev Genet 2002
25

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources.
Da Wei Huang, Brad T Sherman, Richard A Lempicki. Nat Protoc 2009
25


Comprehensive genomic characterization of cutaneous malignant melanoma cell lines derived from metastatic lesions by whole-exome sequencing and SNP array profiling.
Ingrid Cifola, Alessandro Pietrelli, Clarissa Consolandi, Marco Severgnini, Eleonora Mangano, Vincenzo Russo, Gianluca De Bellis, Cristina Battaglia. PLoS One 2013
26
25

Presumed missense and synonymous mutations in ATP7B gene cause exon skipping in Wilson disease.
Chunli Wang, Wei Zhou, Yan Huang, Hanjun Yin, Yu Jin, Zhanjun Jia, Aihua Zhang, Zhifeng Liu, Bixia Zheng. Liver Int 2018
16
25

A framework for the interpretation of de novo mutation in human disease.
Kaitlin E Samocha, Elise B Robinson, Stephan J Sanders, Christine Stevens, Aniko Sabo, Lauren M McGrath, Jack A Kosmicki, Karola Rehnström, Swapan Mallick, Andrew Kirby,[...]. Nat Genet 2014
561
25

Predicting the functional consequences of cancer-associated amino acid substitutions.
Hashem A Shihab, Julian Gough, David N Cooper, Ian N M Day, Tom R Gaunt. Bioinformatics 2013
142
25


Characterization of three cell lines derived from fine needle biopsy of choroidal melanoma with metastatic outcome.
Barry L Burgess, Nagesh P Rao, Ascia Eskin, Stanley F Nelson, Tara A McCannel. Mol Vis 2011
9
25

Whole-genome sequencing identifies a recurrent functional synonymous mutation in melanoma.
Jared J Gartner, Stephen C J Parker, Todd D Prickett, Ken Dutton-Regester, Michael L Stitzel, Jimmy C Lin, Sean Davis, Vijaya L Simhadri, Sujata Jha, Nobuko Katagiri,[...]. Proc Natl Acad Sci U S A 2013
112
25

A synonymous RET substitution enhances the oncogenic effect of an in-cis missense mutation by increasing constitutive splicing efficiency.
Valeria Pecce, Marialuisa Sponziello, Giuseppe Damante, Francesca Rosignolo, Cosimo Durante, Livia Lamartina, Giorgio Grani, Diego Russo, Cira Rosaria di Gioia, Sebastiano Filetti,[...]. PLoS Genet 2018
16
25

RNAsnp: efficient detection of local RNA secondary structure changes induced by SNPs.
Radhakrishnan Sabarinathan, Hakim Tafer, Stefan E Seemann, Ivo L Hofacker, Peter F Stadler, Jan Gorodkin. Hum Mutat 2013
84
25

The functional relevance of somatic synonymous mutations in melanoma and other cancers.
Valer Gotea, Jared J Gartner, Nouar Qutob, Laura Elnitski, Yardena Samuels. Pigment Cell Melanoma Res 2015
34
25

Analysis of protein-coding genetic variation in 60,706 humans.
Monkol Lek, Konrad J Karczewski, Eric V Minikel, Kaitlin E Samocha, Eric Banks, Timothy Fennell, Anne H O'Donnell-Luria, James S Ware, Andrew J Hill, Beryl B Cummings,[...]. Nature 2016
25

Causes and effects of N-terminal codon bias in bacterial genes.
Daniel B Goodman, George M Church, Sriram Kosuri. Science 2013
344
25


Ferroptosis suppressed the growth of melanoma that may be related to DNA damage.
Zhenying Wang, Dehui Jin, Dongmei Ma, Cancan Ji, Wangli Wu, Linlin Xu, Li Zhang. Dermatol Ther 2019
3
33

miR-216b enhances the efficacy of vemurafenib by targeting Beclin-1, UVRAG and ATG5 in melanoma.
Meiying Luo, Longfei Wu, Kexin Zhang, Hong Wang, Sharon Wu, Douglas O'Connell, Tongtong Gao, Hanbing Zhong, Yongfei Yang. Cell Signal 2018
18
25

Treatment with mRNA coding for the necroptosis mediator MLKL induces antitumor immunity directed against neo-epitopes.
Lien Van Hoecke, Sandra Van Lint, Kenny Roose, Alexander Van Parys, Peter Vandenabeele, Johan Grooten, Jan Tavernier, Stefaan De Koker, Xavier Saelens. Nat Commun 2018
54
25

Targeting autophagy inhibits melanoma growth by enhancing NK cells infiltration in a CCL5-dependent manner.
Takouhie Mgrditchian, Tsolere Arakelian, Jérôme Paggetti, Muhammad Zaeem Noman, Elodie Viry, Etienne Moussay, Kris Van Moer, Stephanie Kreis, Coralie Guerin, Stephanie Buart,[...]. Proc Natl Acad Sci U S A 2017
113
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.