A citation-based method for searching scientific literature

James C Cronk, Anthony J Filiano, Antoine Louveau, Ioana Marin, Rachel Marsh, Emily Ji, Dylan H Goldman, Igor Smirnov, Nicholas Geraci, Scott Acton, Christopher C Overall, Jonathan Kipnis. J Exp Med 2018
Times Cited: 182







List of co-cited articles
1434 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Fate mapping analysis reveals that adult microglia derive from primitive macrophages.
Florent Ginhoux, Melanie Greter, Marylene Leboeuf, Sayan Nandi, Peter See, Solen Gokhan, Mark F Mehler, Simon J Conway, Lai Guan Ng, E Richard Stanley,[...]. Science 2010
54

A Unique Microglia Type Associated with Restricting Development of Alzheimer's Disease.
Hadas Keren-Shaul, Amit Spinrad, Assaf Weiner, Orit Matcovitch-Natan, Raz Dvir-Szternfeld, Tyler K Ulland, Eyal David, Kuti Baruch, David Lara-Astaiso, Beata Toth,[...]. Cell 2017
45

A Combination of Ontogeny and CNS Environment Establishes Microglial Identity.
F Chris Bennett, Mariko L Bennett, Fazeela Yaqoob, Sara B Mulinyawe, Gerald A Grant, Melanie Hayden Gephart, Edward D Plowey, Ben A Barres. Neuron 2018
226
42

Origin, fate and dynamics of macrophages at central nervous system interfaces.
Tobias Goldmann, Peter Wieghofer, Marta Joana Costa Jordão, Fabiola Prutek, Nora Hagemeyer, Kathrin Frenzel, Lukas Amann, Ori Staszewski, Katrin Kierdorf, Martin Krueger,[...]. Nat Immunol 2016
552
39

Engrafted parenchymal brain macrophages differ from microglia in transcriptome, chromatin landscape and response to challenge.
Anat Shemer, Jonathan Grozovski, Tuan Leng Tay, Jenhan Tao, Alon Volaski, Patrick Süß, Alberto Ardura-Fabregat, Mor Gross-Vered, Jung-Seok Kim, Eyal David,[...]. Nat Commun 2018
90
40

Colony-stimulating factor 1 receptor signaling is necessary for microglia viability, unmasking a microglia progenitor cell in the adult brain.
Monica R P Elmore, Allison R Najafi, Maya A Koike, Nabil N Dagher, Elizabeth E Spangenberg, Rachel A Rice, Masashi Kitazawa, Bernice Matusow, Hoa Nguyen, Brian L West,[...]. Neuron 2014
932
35

Local self-renewal can sustain CNS microglia maintenance and function throughout adult life.
Bahareh Ajami, Jami L Bennett, Charles Krieger, Wolfram Tetzlaff, Fabio M V Rossi. Nat Neurosci 2007
35

New tools for studying microglia in the mouse and human CNS.
Mariko L Bennett, F Chris Bennett, Shane A Liddelow, Bahareh Ajami, Jennifer L Zamanian, Nathaniel B Fernhoff, Sara B Mulinyawe, Christopher J Bohlen, Aykezar Adil, Andrew Tucker,[...]. Proc Natl Acad Sci U S A 2016
918
34

The TREM2-APOE Pathway Drives the Transcriptional Phenotype of Dysfunctional Microglia in Neurodegenerative Diseases.
Susanne Krasemann, Charlotte Madore, Ron Cialic, Caroline Baufeld, Narghes Calcagno, Rachid El Fatimy, Lien Beckers, Elaine O'Loughlin, Yang Xu, Zain Fanek,[...]. Immunity 2017
977
32

Single-Cell RNA Sequencing of Microglia throughout the Mouse Lifespan and in the Injured Brain Reveals Complex Cell-State Changes.
Timothy R Hammond, Connor Dufort, Lasse Dissing-Olesen, Stefanie Giera, Adam Young, Alec Wysoker, Alec J Walker, Frederick Gergits, Michael Segel, James Nemesh,[...]. Immunity 2019
643
32

Identification of a unique TGF-β-dependent molecular and functional signature in microglia.
Oleg Butovsky, Mark P Jedrychowski, Craig S Moore, Ron Cialic, Amanda J Lanser, Galina Gabriely, Thomas Koeglsperger, Ben Dake, Pauline M Wu, Camille E Doykan,[...]. Nat Neurosci 2014
32

Developmental Heterogeneity of Microglia and Brain Myeloid Cells Revealed by Deep Single-Cell RNA Sequencing.
Qingyun Li, Zuolin Cheng, Lu Zhou, Spyros Darmanis, Norma F Neff, Jennifer Okamoto, Gunsagar Gulati, Mariko L Bennett, Lu O Sun, Laura E Clarke,[...]. Neuron 2019
351
31

Sall1 is a transcriptional regulator defining microglia identity and function.
Anne Buttgereit, Iva Lelios, Xueyang Yu, Melissa Vrohlings, Natalie R Krakoski, Emmanuel L Gautier, Ryuichi Nishinakamura, Burkhard Becher, Melanie Greter. Nat Immunol 2016
284
30

Competitive repopulation of an empty microglial niche yields functionally distinct subsets of microglia-like cells.
Harald Lund, Melanie Pieber, Roham Parsa, Jinming Han, David Grommisch, Ewoud Ewing, Lara Kular, Maria Needhamsen, Alexander Espinosa, Emma Nilsson,[...]. Nat Commun 2018
88
31

Microglia emerge from erythromyeloid precursors via Pu.1- and Irf8-dependent pathways.
Katrin Kierdorf, Daniel Erny, Tobias Goldmann, Victor Sander, Christian Schulz, Elisa Gomez Perdiguero, Peter Wieghofer, Annette Heinrich, Pia Riemke, Christoph Hölscher,[...]. Nat Neurosci 2013
824
28

Microglia sculpt postnatal neural circuits in an activity and complement-dependent manner.
Dorothy P Schafer, Emily K Lehrman, Amanda G Kautzman, Ryuta Koyama, Alan R Mardinly, Ryo Yamasaki, Richard M Ransohoff, Michael E Greenberg, Ben A Barres, Beth Stevens. Neuron 2012
27

Tissue-resident macrophage enhancer landscapes are shaped by the local microenvironment.
Yonit Lavin, Deborah Winter, Ronnie Blecher-Gonen, Eyal David, Hadas Keren-Shaul, Miriam Merad, Steffen Jung, Ido Amit. Cell 2014
27

Repopulated microglia are solely derived from the proliferation of residual microglia after acute depletion.
Yubin Huang, Zhen Xu, Shanshan Xiong, Fangfang Sun, Guangrong Qin, Guanglei Hu, Jingjing Wang, Lei Zhao, Yu-Xiang Liang, Tianzhun Wu,[...]. Nat Neurosci 2018
214
26

Microglia development follows a stepwise program to regulate brain homeostasis.
Orit Matcovitch-Natan, Deborah R Winter, Amir Giladi, Stephanie Vargas Aguilar, Amit Spinrad, Sandrine Sarrazin, Hila Ben-Yehuda, Eyal David, Fabiola Zelada González, Pierre Perrin,[...]. Science 2016
590
26

Resting microglial cells are highly dynamic surveillants of brain parenchyma in vivo.
Axel Nimmerjahn, Frank Kirchhoff, Fritjof Helmchen. Science 2005
26

A lineage of myeloid cells independent of Myb and hematopoietic stem cells.
Christian Schulz, Elisa Gomez Perdiguero, Laurent Chorro, Heather Szabo-Rogers, Nicolas Cagnard, Katrin Kierdorf, Marco Prinz, Bishan Wu, Sten Eirik W Jacobsen, Jeffrey W Pollard,[...]. Science 2012
26

Spatial and temporal heterogeneity of mouse and human microglia at single-cell resolution.
Takahiro Masuda, Roman Sankowski, Ori Staszewski, Chotima Böttcher, Lukas Amann, Sagar, Christian Scheiwe, Stefan Nessler, Patrik Kunz, Geert van Loo,[...]. Nature 2019
430
25

Fate mapping reveals origins and dynamics of monocytes and tissue macrophages under homeostasis.
Simon Yona, Ki-Wook Kim, Yochai Wolf, Alexander Mildner, Diana Varol, Michal Breker, Dalit Strauss-Ayali, Sergey Viukov, Martin Guilliams, Alexander Misharin,[...]. Immunity 2013
25

Infiltrating monocytes trigger EAE progression, but do not contribute to the resident microglia pool.
Bahareh Ajami, Jami L Bennett, Charles Krieger, Kelly M McNagny, Fabio M V Rossi. Nat Neurosci 2011
719
25

Single-cell profiling identifies myeloid cell subsets with distinct fates during neuroinflammation.
Marta Joana Costa Jordão, Roman Sankowski, Stefanie M Brendecke, Sagar, Giuseppe Locatelli, Yi-Heng Tai, Tuan Leng Tay, Eva Schramm, Stephan Armbruster, Nora Hagemeyer,[...]. Science 2019
323
24

A single-cell atlas of mouse brain macrophages reveals unique transcriptional identities shaped by ontogeny and tissue environment.
Hannah Van Hove, Liesbet Martens, Isabelle Scheyltjens, Karen De Vlaminck, Ana Rita Pombo Antunes, Sofie De Prijck, Niels Vandamme, Sebastiaan De Schepper, Gert Van Isterdael, Charlotte L Scott,[...]. Nat Neurosci 2019
290
24

Synaptic pruning by microglia is necessary for normal brain development.
Rosa C Paolicelli, Giulia Bolasco, Francesca Pagani, Laura Maggi, Maria Scianni, Patrizia Panzanelli, Maurizio Giustetto, Tiago Alves Ferreira, Eva Guiducci, Laura Dumas,[...]. Science 2011
23

Microglia promote learning-dependent synapse formation through brain-derived neurotrophic factor.
Christopher N Parkhurst, Guang Yang, Ipe Ninan, Jeffrey N Savas, John R Yates, Juan J Lafaille, Barbara L Hempstead, Dan R Littman, Wen-Biao Gan. Cell 2013
23

Microglia in the adult brain arise from Ly-6ChiCCR2+ monocytes only under defined host conditions.
Alexander Mildner, Hauke Schmidt, Mirko Nitsche, Doron Merkler, Uwe-Karsten Hanisch, Matthias Mack, Mathias Heikenwalder, Wolfgang Brück, Josef Priller, Marco Prinz. Nat Neurosci 2007
764
23

High-Dimensional Single-Cell Mapping of Central Nervous System Immune Cells Reveals Distinct Myeloid Subsets in Health, Aging, and Disease.
Dunja Mrdjen, Anto Pavlovic, Felix J Hartmann, Bettina Schreiner, Sebastian G Utz, Brian P Leung, Iva Lelios, Frank L Heppner, Jonathan Kipnis, Doron Merkler,[...]. Immunity 2018
340
22

The microglial sensome revealed by direct RNA sequencing.
Suzanne E Hickman, Nathan D Kingery, Toshiro K Ohsumi, Mark L Borowsky, Li-chong Wang, Terry K Means, Joseph El Khoury. Nat Neurosci 2013
859
22

A new fate mapping system reveals context-dependent random or clonal expansion of microglia.
Tuan Leng Tay, Dominic Mai, Jana Dautzenberg, Francisco Fernández-Klett, Gen Lin, Sagar, Moumita Datta, Anne Drougard, Thomas Stempfl, Alberto Ardura-Fabregat,[...]. Nat Neurosci 2017
300
22

Tissue-resident macrophages originate from yolk-sac-derived erythro-myeloid progenitors.
Elisa Gomez Perdiguero, Kay Klapproth, Christian Schulz, Katrin Busch, Emanuele Azzoni, Lucile Crozet, Hannah Garner, Celine Trouillet, Marella F de Bruijn, Frederic Geissmann,[...]. Nature 2015
21

Coupled Proliferation and Apoptosis Maintain the Rapid Turnover of Microglia in the Adult Brain.
Katharine Askew, Kaizhen Li, Adrian Olmos-Alonso, Fernando Garcia-Moreno, Yajie Liang, Philippa Richardson, Tom Tipton, Mark A Chapman, Kristoffer Riecken, Sol Beccari,[...]. Cell Rep 2017
333
20

Genetic Cell Ablation Reveals Clusters of Local Self-Renewing Microglia in the Mammalian Central Nervous System.
Julia Bruttger, Khalad Karram, Simone Wörtge, Tommy Regen, Federico Marini, Nicola Hoppmann, Matthias Klein, Thomas Blank, Simon Yona, Yochai Wolf,[...]. Immunity 2015
356
19

ATP mediates rapid microglial response to local brain injury in vivo.
Dimitrios Davalos, Jaime Grutzendler, Guang Yang, Jiyun V Kim, Yi Zuo, Steffen Jung, Dan R Littman, Michael L Dustin, Wen-Biao Gan. Nat Neurosci 2005
19

Complement and microglia mediate early synapse loss in Alzheimer mouse models.
Soyon Hong, Victoria F Beja-Glasser, Bianca M Nfonoyim, Arnaud Frouin, Shaomin Li, Saranya Ramakrishnan, Katherine M Merry, Qiaoqiao Shi, Arnon Rosenthal, Ben A Barres,[...]. Science 2016
19

Environment drives selection and function of enhancers controlling tissue-specific macrophage identities.
David Gosselin, Verena M Link, Casey E Romanoski, Gregory J Fonseca, Dawn Z Eichenfield, Nathanael J Spann, Joshua D Stender, Hyun B Chun, Hannah Garner, Frederic Geissmann,[...]. Cell 2014
782
19

C-Myb(+) erythro-myeloid progenitor-derived fetal monocytes give rise to adult tissue-resident macrophages.
Guillaume Hoeffel, Jinmiao Chen, Yonit Lavin, Donovan Low, Francisca F Almeida, Peter See, Anna E Beaudin, Josephine Lum, Ivy Low, E Camilla Forsberg,[...]. Immunity 2015
606
19

A new type of microglia gene targeting shows TAK1 to be pivotal in CNS autoimmune inflammation.
Tobias Goldmann, Peter Wieghofer, Philippe F Müller, Yochai Wolf, Diana Varol, Simon Yona, Stefanie M Brendecke, Katrin Kierdorf, Ori Staszewski, Moumita Datta,[...]. Nat Neurosci 2013
415
19

Microglia and macrophages in brain homeostasis and disease.
Qingyun Li, Ben A Barres. Nat Rev Immunol 2018
675
18

IL-34 is a tissue-restricted ligand of CSF1R required for the development of Langerhans cells and microglia.
Yaming Wang, Kristy J Szretter, William Vermi, Susan Gilfillan, Cristina Rossini, Marina Cella, Alexander D Barrow, Michael S Diamond, Marco Colonna. Nat Immunol 2012
569
17

The Lifespan and Turnover of Microglia in the Human Brain.
Pedro Réu, Azadeh Khosravi, Samuel Bernard, Jeff E Mold, Mehran Salehpour, Kanar Alkass, Shira Perl, John Tisdale, Göran Possnert, Henrik Druid,[...]. Cell Rep 2017
188
17

Absence of colony stimulation factor-1 receptor results in loss of microglia, disrupted brain development and olfactory deficits.
Bryna Erblich, Liyin Zhu, Anne M Etgen, Kostantin Dobrenis, Jeffrey W Pollard. PLoS One 2011
348
16

Human microglia regional heterogeneity and phenotypes determined by multiplexed single-cell mass cytometry.
Chotima Böttcher, Stephan Schlickeiser, Marjolein A M Sneeboer, Desiree Kunkel, Anniki Knop, Evdokia Paza, Pawel Fidzinski, Larissa Kraus, Gijsje J L Snijders, René S Kahn,[...]. Nat Neurosci 2019
165
16

Diverse Requirements for Microglial Survival, Specification, and Function Revealed by Defined-Medium Cultures.
Christopher J Bohlen, F Chris Bennett, Andrew F Tucker, Hannah Y Collins, Sara B Mulinyawe, Ben A Barres. Neuron 2017
289
16

Neurotoxic reactive astrocytes are induced by activated microglia.
Shane A Liddelow, Kevin A Guttenplan, Laura E Clarke, Frederick C Bennett, Christopher J Bohlen, Lucas Schirmer, Mariko L Bennett, Alexandra E Münch, Won-Suk Chung, Todd C Peterson,[...]. Nature 2017
16

Tissue-Resident Macrophage Ontogeny and Homeostasis.
Florent Ginhoux, Martin Guilliams. Immunity 2016
812
16

Analysis of fractalkine receptor CX(3)CR1 function by targeted deletion and green fluorescent protein reporter gene insertion.
S Jung, J Aliberti, P Graemmel, M J Sunshine, G W Kreutzberg, A Sher, D R Littman. Mol Cell Biol 2000
16

Microglial brain region-dependent diversity and selective regional sensitivities to aging.
Kathleen Grabert, Tom Michoel, Michail H Karavolos, Sara Clohisey, J Kenneth Baillie, Mark P Stevens, Tom C Freeman, Kim M Summers, Barry W McColl. Nat Neurosci 2016
597
15


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.