A citation-based method for searching scientific literature

Jennifer J Wanat, Glennis A Logsdon, Jordan H Driskill, Zhong Deng, Paul M Lieberman, F Brad Johnson. PLoS One 2018
Times Cited: 3







List of co-cited articles
6 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Telomere Length Determines TERRA and R-Loop Regulation through the Cell Cycle.
Marco Graf, Diego Bonetti, Arianna Lockhart, Kamar Serhal, Vanessa Kellner, André Maicher, Pascale Jolivet, Maria Teresa Teixeira, Brian Luke. Cell 2017
109
66

CpG-island promoters drive transcription of human telomeres.
Solomon G Nergadze, Benjamin O Farnung, Harry Wischnewski, Lela Khoriauli, Valerio Vitelli, Raghav Chawla, Elena Giulotto, Claus M Azzalin. RNA 2009
147
66

CTCF driven TERRA transcription facilitates completion of telomere DNA replication.
Kate Beishline, Olga Vladimirova, Stephen Tutton, Zhuo Wang, Zhong Deng, Paul M Lieberman. Nat Commun 2017
34
66

TERRA RNA binding to TRF2 facilitates heterochromatin formation and ORC recruitment at telomeres.
Zhong Deng, Julie Norseen, Andreas Wiedmer, Harold Riethman, Paul M Lieberman. Mol Cell 2009
345
66

Epigenetic regulation of telomere length in mammalian cells by the Suv39h1 and Suv39h2 histone methyltransferases.
Marta García-Cao, Roderick O'Sullivan, Antoine H F M Peters, Thomas Jenuwein, María A Blasco. Nat Genet 2004
392
66

Key role of piRNAs in telomeric chromatin maintenance and telomere nuclear positioning in Drosophila germline.
Elizaveta Radion, Valeriya Morgunova, Sergei Ryazansky, Natalia Akulenko, Sergey Lavrov, Yuri Abramov, Pavel A Komarov, Sergey I Glukhov, Ivan Olovnikov, Alla Kalmykova. Epigenetics Chromatin 2018
16
66

Silencing at Drosophila telomeres: nuclear organization and chromatin structure play critical roles.
D E Cryderman, E J Morris, H Biessmann, S C Elgin, L L Wallrath. EMBO J 1999
114
33

The chromosomal proteins JIL-1 and Z4/Putzig regulate the telomeric chromatin in Drosophila melanogaster.
Rute Silva-Sousa, Elisenda López-Panadès, David Piñeyro, Elena Casacuberta. PLoS Genet 2012
18
33

Drosophila rasiRNA pathway mutations disrupt embryonic axis specification through activation of an ATR/Chk2 DNA damage response.
Carla Klattenhoff, Diana P Bratu, Nadine McGinnis-Schultz, Birgit S Koppetsch, Heather A Cook, William E Theurkauf. Dev Cell 2007
205
33

The non-coding RNA TERRA is a natural ligand and direct inhibitor of human telomerase.
Sophie Redon, Patrick Reichenbach, Joachim Lingner. Nucleic Acids Res 2010
220
33


Quantitative interaction screen of telomeric repeat-containing RNA reveals novel TERRA regulators.
Marion Scheibe, Nausica Arnoult, Dennis Kappei, Frank Buchholz, Anabelle Decottignies, Falk Butter, Matthias Mann. Genome Res 2013
47
33



Telomeric Retrotransposon HeT-A Contains a Bidirectional Promoter that Initiates Divergent Transcription of piRNA Precursors in Drosophila Germline.
Elizaveta Radion, Sergei Ryazansky, Natalia Akulenko, Yakov Rozovsky, Dmitry Kwon, Valeriya Morgunova, Ivan Olovnikov, Alla Kalmykova. J Mol Biol 2017
12
33

TERRA transcripts are bound by a complex array of RNA-binding proteins.
Isabel López de Silanes, Martina Stagno d'Alcontres, Maria A Blasco. Nat Commun 2010
94
33


Gag proteins of the two Drosophila telomeric retrotransposons are targeted to chromosome ends.
Svetlana Rashkova, Sarah E Karam, Rebecca Kellum, Mary-Lou Pardue. J Cell Biol 2002
63
33

MTV sings jubilation for telomere biology in Drosophila.
Lin Cheng, Ming Cui, Yikang S Rong. Fly (Austin) 2018
4
33

Telomere length regulates TERRA levels through increased trimethylation of telomeric H3K9 and HP1α.
Nausica Arnoult, Amandine Van Beneden, Anabelle Decottignies. Nat Struct Mol Biol 2012
151
33

HP1 controls telomere capping, telomere elongation, and telomere silencing by two different mechanisms in Drosophila.
Barbara Perrini, Lucia Piacentini, Laura Fanti, Fabio Altieri, Silvia Chichiarelli, Maria Berloco, Carlo Turano, Anna Ferraro, Sergio Pimpinelli. Mol Cell 2004
131
33

Transcriptional outcome of telomere signalling.
Jing Ye, Valérie M Renault, Karine Jamet, Eric Gilson. Nat Rev Genet 2014
79
33

Heterochromatin protein 1 is involved in control of telomere elongation in Drosophila melanogaster.
Mikhail Savitsky, Oksana Kravchuk, Larisa Melnikova, Pavel Georgiev. Mol Cell Biol 2002
90
33

rasiRNA pathway controls antisense expression of Drosophila telomeric retrotransposons in the nucleus.
Sergey Shpiz, Dmitry Kwon, Yakov Rozovsky, Alla Kalmykova. Nucleic Acids Res 2009
44
33

Drosophila telomeres: A variation on the telomerase theme.
Mary-Lou Pardue, P Gregory DeBaryshe. Fly (Austin) 2008
38
33


Telomere length regulates the epigenetic status of mammalian telomeres and subtelomeres.
Roberta Benetti, Marta García-Cao, María A Blasco. Nat Genet 2007
245
33

Telomeric noncoding RNA TERRA is induced by telomere shortening to nucleate telomerase molecules at short telomeres.
Emilio Cusanelli, Carmina Angelica Perez Romero, Pascal Chartrand. Mol Cell 2013
133
33


TERRA promotes telomerase-mediated telomere elongation in Schizosaccharomyces pombe.
Martin Moravec, Harry Wischnewski, Amadou Bah, Yan Hu, Na Liu, Lorenzo Lafranchi, Megan C King, Claus M Azzalin. EMBO Rep 2016
46
33

A three-state model for the regulation of telomerase by TERRA and hnRNPA1.
Sophie Redon, Ivo Zemp, Joachim Lingner. Nucleic Acids Res 2013
58
33

Telomeric position effect--a third silencing mechanism in eukaryotes.
J Greg Doheny, Randy Mottus, Thomas A Grigliatti. PLoS One 2008
30
33

TERRA and hnRNPA1 orchestrate an RPA-to-POT1 switch on telomeric single-stranded DNA.
Rachel Litman Flynn, Richard C Centore, Roderick J O'Sullivan, Rekha Rai, Alice Tse, Zhou Songyang, Sandy Chang, Jan Karlseder, Lee Zou. Nature 2011
221
33

Egalitarian is a selective RNA-binding protein linking mRNA localization signals to the dynein motor.
Martin Dienstbier, Florian Boehl, Xuan Li, Simon L Bullock. Genes Dev 2009
128
33

Targeting of Polycomb Repressive Complex 2 to RNA by Short Repeats of Consecutive Guanines.
Xueyin Wang, Karen J Goodrich, Anne R Gooding, Haroon Naeem, Stuart Archer, Richard D Paucek, Daniel T Youmans, Thomas R Cech, Chen Davidovich. Mol Cell 2017
94
33

Identification of TERRA locus unveils a telomere protection role through association to nearly all chromosomes.
Isabel López de Silanes, Osvaldo Graña, Maria Luigia De Bonis, Orlando Dominguez, David G Pisano, Maria A Blasco. Nat Commun 2014
54
33

Molecular model for telomeric heterochromatin in yeast.
M Grunstein. Curr Opin Cell Biol 1997
173
33

Telomerase efficiently elongates highly transcribing telomeres in human cancer cells.
Benjamin O Farnung, Catherine M Brun, Rajika Arora, Luca E Lorenzi, Claus M Azzalin. PLoS One 2012
55
33

The telomeric transcriptome of Schizosaccharomyces pombe.
Amadou Bah, Harry Wischnewski, Vadim Shchepachev, Claus M Azzalin. Nucleic Acids Res 2012
69
33


Unprotected Drosophila melanogaster telomeres activate the spindle assembly checkpoint.
Mariarosaria Musarò, Laura Ciapponi, Barbara Fasulo, Maurizio Gatti, Giovanni Cenci. Nat Genet 2008
35
33

MLL associates with telomeres and regulates telomeric repeat-containing RNA transcription.
Corrado Caslini, James A Connelly, Amparo Serna, Dominique Broccoli, Jay L Hess. Mol Cell Biol 2009
90
33

Telomeric repeat containing RNA and RNA surveillance factors at mammalian chromosome ends.
Claus M Azzalin, Patrick Reichenbach, Lela Khoriauli, Elena Giulotto, Joachim Lingner. Science 2007
809
33

The role of double-strand break repair pathways at functional and dysfunctional telomeres.
Ylli Doksani, Titia de Lange. Cold Spring Harb Perspect Biol 2014
81
33

HP1 is distributed within distinct chromatin domains at Drosophila telomeres.
Radmila Capkova Frydrychova, James M Mason, Trevor K Archer. Genetics 2008
21
33

Telomeric repeat silencing in germ cells is essential for early development in Drosophila.
Valeriya Morgunova, Natalia Akulenko, Elizaveta Radion, Ivan Olovnikov, Yuri Abramov, Ludmila V Olenina, Sergey Shpiz, Daria V Kopytova, Sofia G Georgieva, Alla Kalmykova. Nucleic Acids Res 2015
19
33

Hypomethylation of subtelomeric regions in ICF syndrome is associated with abnormally short telomeres and enhanced transcription from telomeric regions.
Shiran Yehezkel, Yardena Segev, Evani Viegas-Péquignot, Karl Skorecki, Sara Selig. Hum Mol Genet 2008
156
33

Telomere elongation chooses TERRA ALTernatives.
Rajika Arora, Claus M Azzalin. RNA Biol 2015
30
33

The DNA damage response at eroded telomeres and tethering to the nuclear pore complex.
Basheer Khadaroo, M Teresa Teixeira, Pierre Luciano, Nadine Eckert-Boulet, Susanne M Germann, Marie Noelle Simon, Irene Gallina, Pauline Abdallah, Eric Gilson, Vincent Géli,[...]. Nat Cell Biol 2009
139
33

Telomeric RNA-DNA hybrids affect telomere-length dynamics and senescence.
Bettina Balk, André Maicher, Martina Dees, Julia Klermund, Sarah Luke-Glaser, Katharina Bender, Brian Luke. Nat Struct Mol Biol 2013
177
33


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.