A citation-based method for searching scientific literature

Maja Zadel, Aleš Maver, Anja Kovanda, Borut Peterlin. OMICS 2018
Times Cited: 6







List of co-cited articles
36 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Common disease signatures from gene expression analysis in Huntington's disease human blood and brain.
Eleni Mina, Willeke van Roon-Mom, Kristina Hettne, Erik van Zwet, Jelle Goeman, Christian Neri, Peter A C 't Hoen, Barend Mons, Marco Roos. Orphanet J Rare Dis 2016
23
66

Huntington's disease biomarker progression profile identified by transcriptome sequencing in peripheral blood.
Anastasios Mastrokolias, Yavuz Ariyurek, Jelle J Goeman, Erik van Duijn, Raymund A C Roos, Roos C van der Mast, GertJan B van Ommen, Johan T den Dunnen, Peter A C 't Hoen, Willeke M C van Roon-Mom. Eur J Hum Genet 2015
53
66

Huntington's disease blood and brain show a common gene expression pattern and share an immune signature with Alzheimer's disease.
Davina J Hensman Moss, Michael D Flower, Kitty K Lo, James R C Miller, Gert-Jan B van Ommen, Peter A C 't Hoen, Timothy C Stone, Amelia Guinee, Douglas R Langbehn, Lesley Jones,[...]. Sci Rep 2017
29
66

Dysregulation of gene expression in the R6/2 model of polyglutamine disease: parallel changes in muscle and brain.
Ruth Luthi-Carter, Sarah A Hanson, Andrew D Strand, Donald A Bergstrom, Wanjoo Chun, Nikki L Peters, Annette M Woods, Edmond Y Chan, Charles Kooperberg, Dimitri Krainc,[...]. Hum Mol Genet 2002
297
50

Transcriptional modulator H2A histone family, member Y (H2AFY) marks Huntington disease activity in man and mouse.
Yi Hu, Vanita Chopra, Raman Chopra, Joseph J Locascio, Zhixiang Liao, Hongliu Ding, Bin Zheng, Wayne R Matson, Robert J Ferrante, H Diana Rosas,[...]. Proc Natl Acad Sci U S A 2011
68
50

Beyond the brain: widespread pathology in Huntington's disease.
Jorien M M van der Burg, Maria Björkqvist, Patrik Brundin. Lancet Neurol 2009
225
50


Regional and cellular gene expression changes in human Huntington's disease brain.
Angela Hodges, Andrew D Strand, Aaron K Aragaki, Alexandre Kuhn, Thierry Sengstag, Gareth Hughes, Lyn A Elliston, Cathy Hartog, Darlene R Goldstein, Doris Thu,[...]. Hum Mol Genet 2006
540
50

A novel pathogenic pathway of immune activation detectable before clinical onset in Huntington's disease.
Maria Björkqvist, Edward J Wild, Jenny Thiele, Aurelio Silvestroni, Ralph Andre, Nayana Lahiri, Elsa Raibon, Richard V Lee, Caroline L Benn, Denis Soulet,[...]. J Exp Med 2008
394
50

Analysis of potential transcriptomic biomarkers for Huntington's disease in peripheral blood.
Heike Runne, Alexandre Kuhn, Edward J Wild, Wirahpati Pratyaksha, Mark Kristiansen, Jeremy D Isaacs, Etienne Régulier, Mauro Delorenzi, Sarah J Tabrizi, Ruth Luthi-Carter. Proc Natl Acad Sci U S A 2007
100
50

Genome-wide expression profiling of human blood reveals biomarkers for Huntington's disease.
F Borovecki, L Lovrecic, J Zhou, H Jeong, F Then, H D Rosas, S M Hersch, P Hogarth, B Bouzou, R V Jensen,[...]. Proc Natl Acad Sci U S A 2005
286
50

Transcriptional abnormalities in Huntington disease.
Katharine L Sugars, David C Rubinsztein. Trends Genet 2003
421
50

A study of molecular changes relating to energy metabolism and cellular stress in people with Huntington's disease: looking for biomarkers.
Jolanta Krzysztoń-Russjan, Daniel Zielonka, Joanna Jackiewicz, Sylwia Kuśmirek, Irena Bubko, Aneta Klimberg, Jerzy T Marcinkowski, Elżbieta L Anuszewska. J Bioenerg Biomembr 2013
25
50

Gene expression changes in blood as a putative biomarker for Huntington's disease.
Luca Lovrecic, Andrej Kastrin, Jan Kobal, Zvezdan Pirtosek, Dimitri Krainc, Borut Peterlin. Mov Disord 2009
23
50

Evaluating the SERCA2 and VEGF mRNAs as Potential Molecular Biomarkers of the Onset and Progression in Huntington's Disease.
Federica Cesca, Elisa Bregant, Borut Peterlin, Maja Zadel, Giorgia Dubsky de Wittenau, Gabriele Siciliano, Roberto Ceravolo, Lucia Petrozzi, Giada Pauletto, Lorenzo Verriello,[...]. PLoS One 2015
8
33

beadarray: R classes and methods for Illumina bead-based data.
Mark J Dunning, Mike L Smith, Matthew E Ritchie, Simon Tavaré. Bioinformatics 2007
369
33

Neurofilament light protein in blood as a potential biomarker of neurodegeneration in Huntington's disease: a retrospective cohort analysis.
Lauren M Byrne, Filipe B Rodrigues, Kaj Blennow, Alexandra Durr, Blair R Leavitt, Raymund A C Roos, Rachael I Scahill, Sarah J Tabrizi, Henrik Zetterberg, Douglas Langbehn,[...]. Lancet Neurol 2017
174
33

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.
Aravind Subramanian, Pablo Tamayo, Vamsi K Mootha, Sayan Mukherjee, Benjamin L Ebert, Michael A Gillette, Amanda Paulovich, Scott L Pomeroy, Todd R Golub, Eric S Lander,[...]. Proc Natl Acad Sci U S A 2005
33

Adjusting batch effects in microarray expression data using empirical Bayes methods.
W Evan Johnson, Cheng Li, Ariel Rabinovic. Biostatistics 2007
33

PANTHER version 11: expanded annotation data from Gene Ontology and Reactome pathways, and data analysis tool enhancements.
Huaiyu Mi, Xiaosong Huang, Anushya Muruganujan, Haiming Tang, Caitlin Mills, Diane Kang, Paul D Thomas. Nucleic Acids Res 2017
33

lumi: a pipeline for processing Illumina microarray.
Pan Du, Warren A Kibbe, Simon M Lin. Bioinformatics 2008
33

Venezuelan kindreds reveal that genetic and environmental factors modulate Huntington's disease age of onset.
Nancy S Wexler, Judith Lorimer, Julie Porter, Fidela Gomez, Carol Moskowitz, Edith Shackell, Karen Marder, Graciela Penchaszadeh, Simone A Roberts, Javier Gayán,[...]. Proc Natl Acad Sci U S A 2004
490
33

What have we learned from gene expression profiles in Huntington's disease?
Tamara Seredenina, Ruth Luthi-Carter. Neurobiol Dis 2012
102
33



Length of Uninterrupted CAG, Independent of Polyglutamine Size, Results in Increased Somatic Instability, Hastening Onset of Huntington Disease.
Galen E B Wright, Jennifer A Collins, Chris Kay, Cassandra McDonald, Egor Dolzhenko, Qingwen Xia, Kristina Bečanović, Britt I Drögemöller, Alicia Semaka, Charlotte M Nguyen,[...]. Am J Hum Genet 2019
60
33

Gene expression profile in fibroblasts of Huntington's disease patients and controls.
Eleonora Marchina, Silvia Misasi, Andrea Bozzato, Sergio Ferraboli, Chiara Agosti, Luca Rozzini, Giuseppe Borsani, Sergio Barlati, Alessandro Padovani. J Neurol Sci 2014
19
33

Biofluid Biomarkers in Huntington's Disease.
Filipe B Rodrigues, Lauren M Byrne, Edward J Wild. Methods Mol Biol 2018
12
33

Gene expression in Huntington's disease skeletal muscle: a potential biomarker.
Andrew D Strand, Aaron K Aragaki, Dennis Shaw, Thomas Bird, Janice Holton, Christopher Turner, Stephen J Tapscott, Sarah J Tabrizi, Anthony H Schapira, Charles Kooperberg,[...]. Hum Mol Genet 2005
124
33

RNA-Seq of Huntington's disease patient myeloid cells reveals innate transcriptional dysregulation associated with proinflammatory pathway activation.
James R C Miller, Kitty K Lo, Ralph Andre, Davina J Hensman Moss, Ulrike Träger, Timothy C Stone, Lesley Jones, Peter Holmans, Vincent Plagnol, Sarah J Tabrizi. Hum Mol Genet 2016
31
33

Quantification of mutant huntingtin protein in cerebrospinal fluid from Huntington's disease patients.
Edward J Wild, Roberto Boggio, Douglas Langbehn, Nicola Robertson, Salman Haider, James R C Miller, Henrik Zetterberg, Blair R Leavitt, Rainer Kuhn, Sarah J Tabrizi,[...]. J Clin Invest 2015
134
33

Abnormal peripheral chemokine profile in Huntington's disease.
Edward Wild, Anna Magnusson, Nayana Lahiri, Ulrika Krus, Michael Orth, Sarah J Tabrizi, Maria Björkqvist. PLoS Curr 2011
68
33

RNA Sequencing of Human Peripheral Blood Cells Indicates Upregulation of Immune-Related Genes in Huntington's Disease.
Miguel A Andrade-Navarro, Katja Mühlenberg, Eike J Spruth, Nancy Mah, Adrián González-López, Tommaso Andreani, Jenny Russ, Matthew R Huska, Enrique M Muro, Jean-Fred Fontaine,[...]. Front Neurol 2020
4
50

Huntington's Disease Clinical Trials Corner: April 2020.
Filipe B Rodrigues, Edward J Wild. J Huntingtons Dis 2020
21
33

Fluid and imaging biomarkers for Huntington's disease.
Paul Zeun, Rachael I Scahill, Sarah J Tabrizi, Edward J Wild. Mol Cell Neurosci 2019
18
33

Microtubule destabilization and nuclear entry are sequential steps leading to toxicity in Huntington's disease.
Eugenia Trushina, Michael P Heldebrant, Carmen M Perez-Terzic, Ryan Bortolon, Irina V Kovtun, John D Badger, Andre Terzic, Alvaro Estévez, Anthony J Windebank, Roy B Dyer,[...]. Proc Natl Acad Sci U S A 2003
69
16

Cardiomyocyte expression of a polyglutamine preamyloid oligomer causes heart failure.
J Scott Pattison, Atsushi Sanbe, Alina Maloyan, Hanna Osinska, Raisa Klevitsky, Jeffrey Robbins. Circulation 2008
106
16

Potential biomarkers to follow the progression and treatment response of Huntington's disease.
Marie-Hélène Disatnik, Amit U Joshi, Nay L Saw, Mehrdad Shamloo, Blair R Leavitt, Xin Qi, Daria Mochly-Rosen. J Exp Med 2016
30
16

Search for SCA2 blood RNA biomarkers highlights Ataxin-2 as strong modifier of the mitochondrial factor PINK1 levels.
Nesli Ece Sen, Jessica Drost, Suzana Gispert, Sylvia Torres-Odio, Ewa Damrath, Michael Klinkenberg, Hamid Hamzeiy, Gülden Akdal, Halil Güllüoğlu, A Nazlı Başak,[...]. Neurobiol Dis 2016
21
16

Deranged neuronal calcium signaling and Huntington disease.
Ilya Bezprozvanny, Michael R Hayden. Biochem Biophys Res Commun 2004
193
16

Oxidative stress and inflammation biomarkers in the blood of patients with Huntington's disease.
Fernando Sánchez-López, Inmaculada Tasset, Eduardo Agüera, Montserrat Feijóo, Ricardo Fernández-Bolaños, Francisco M Sánchez, María C Ruiz, Antonio H Cruz, Félix Gascón, Isaac Túnez. Neurol Res 2012
54
16

Metabolic disturbances in plasma as biomarkers for Huntington's disease.
Mei-Ling Cheng, Kuo-Hsuan Chang, Yih-Ru Wu, Chiung-Mei Chen. J Nutr Biochem 2016
30
16

The therapeutic potential of G-protein coupled receptors in Huntington's disease.
Megan J Dowie, Emma L Scotter, Emanuela Molinari, Michelle Glass. Pharmacol Ther 2010
14
16

Microglial activation in presymptomatic Huntington's disease gene carriers.
Yen F Tai, Nicola Pavese, Alexander Gerhard, Sarah J Tabrizi, Roger A Barker, David J Brooks, Paola Piccini. Brain 2007
282
16

Conditions associated with Huntington's disease at death. A case-control study.
D J Lanska, M J Lanska, L Lavine, B S Schoenberg. Arch Neurol 1988
68
16

Huntington's disease: the challenge for cell biologists.
A J Tobin, E R Signer. Trends Cell Biol 2000
174
16


Clinical correlates of mitochondrial function in Huntington's disease muscle.
Christopher Turner, J Mark Cooper, Anthony H V Schapira. Mov Disord 2007
68
16



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.