A citation-based method for searching scientific literature

Viktoriya Peeva, Daniel Blei, Genevieve Trombly, Sarah Corsi, Maciej J Szukszto, Pedro Rebelo-Guiomar, Payam A Gammage, Alexei P Kudin, Christian Becker, Janine Altmüller, Michal Minczuk, Gábor Zsurka, Wolfram S Kunz. Nat Commun 2018
Times Cited: 60







List of co-cited articles
922 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Specific elimination of mutant mitochondrial genomes in patient-derived cells by mitoTALENs.
Sandra R Bacman, Siôn L Williams, Milena Pinto, Susana Peralta, Carlos T Moraes. Nat Med 2013
215
45

Mitochondrially targeted ZFNs for selective degradation of pathogenic mitochondrial genomes bearing large-scale deletions or point mutations.
Payam A Gammage, Joanna Rorbach, Anna I Vincent, Edward J Rebar, Michal Minczuk. EMBO Mol Med 2014
137
43

The mitochondrial DNA polymerase gamma degrades linear DNA fragments precluding the formation of deletions.
Nadee Nissanka, Sandra R Bacman, Melanie J Plastini, Carlos T Moraes. Nat Commun 2018
42
61

Genome editing in mitochondria corrects a pathogenic mtDNA mutation in vivo.
Payam A Gammage, Carlo Viscomi, Marie-Lune Simard, Ana S H Costa, Edoardo Gaude, Christopher A Powell, Lindsey Van Haute, Beverly J McCann, Pedro Rebelo-Guiomar, Raffaele Cerutti,[...]. Nat Med 2018
106
40

Selective mitochondrial DNA degradation following double-strand breaks.
Amandine Moretton, Frédéric Morel, Bertil Macao, Philippe Lachaume, Layal Ishak, Mathilde Lefebvre, Isabelle Garreau-Balandier, Patrick Vernet, Maria Falkenberg, Géraldine Farge. PLoS One 2017
55
41

MitoTALEN reduces mutant mtDNA load and restores tRNAAla levels in a mouse model of heteroplasmic mtDNA mutation.
Sandra R Bacman, Johanna H K Kauppila, Claudia V Pereira, Nadee Nissanka, Maria Miranda, Milena Pinto, Sion L Williams, Nils-Göran Larsson, James B Stewart, Carlos T Moraes. Nat Med 2018
91
38

Selective elimination of mitochondrial mutations in the germline by genome editing.
Pradeep Reddy, Alejandro Ocampo, Keiichiro Suzuki, Jinping Luo, Sandra R Bacman, Sion L Williams, Atsushi Sugawara, Daiji Okamura, Yuji Tsunekawa, Jun Wu,[...]. Cell 2015
151
35

Mitochondrial Genome Engineering: The Revolution May Not Be CRISPR-Ized.
Payam A Gammage, Carlos T Moraes, Michal Minczuk. Trends Genet 2018
103
33

MitoTALEN: A General Approach to Reduce Mutant mtDNA Loads and Restore Oxidative Phosphorylation Function in Mitochondrial Diseases.
Masami Hashimoto, Sandra R Bacman, Susana Peralta, Marni J Falk, Anne Chomyn, David C Chan, Sion L Williams, Carlos T Moraes. Mol Ther 2015
85
28


Single-Molecule Analysis of mtDNA Replication Uncovers the Basis of the Common Deletion.
Aaron F Phillips, Armêl R Millet, Marco Tigano, Sonia M Dubois, Hannah Crimmins, Loelia Babin, Marine Charpentier, Marion Piganeau, Erika Brunet, Agnel Sfeir. Mol Cell 2017
66
26

Efficient Mitochondrial Genome Editing by CRISPR/Cas9.
Areum Jo, Sangwoo Ham, Gum Hwa Lee, Yun-Il Lee, SangSeong Kim, Yun-Song Lee, Joo-Ho Shin, Yunjong Lee. Biomed Res Int 2015
98
26

Premature ageing in mice expressing defective mitochondrial DNA polymerase.
Aleksandra Trifunovic, Anna Wredenberg, Maria Falkenberg, Johannes N Spelbrink, Anja T Rovio, Carl E Bruder, Mohammad Bohlooly-Y, Sebastian Gidlöf, Anders Oldfors, Rolf Wibom,[...]. Nature 2004
25

Sequence-specific modification of mitochondrial DNA using a chimeric zinc finger methylase.
Michal Minczuk, Monika A Papworth, Paulina Kolasinska, Michael P Murphy, Aaron Klug. Proc Natl Acad Sci U S A 2006
97
25

Maintenance and Expression of Mammalian Mitochondrial DNA.
Claes M Gustafsson, Maria Falkenberg, Nils-Göran Larsson. Annu Rev Biochem 2016
260
23

Prevalence of nuclear and mitochondrial DNA mutations related to adult mitochondrial disease.
Gráinne S Gorman, Andrew M Schaefer, Yi Ng, Nicholas Gomez, Emma L Blakely, Charlotte L Alston, Catherine Feeney, Rita Horvath, Patrick Yu-Wai-Man, Patrick F Chinnery,[...]. Ann Neurol 2015
395
23

Rapid directional shift of mitochondrial DNA heteroplasmy in animal tissues by a mitochondrially targeted restriction endonuclease.
Maria Pilar Bayona-Bafaluy, Bas Blits, Brendan J Battersby, Eric A Shoubridge, Carlos T Moraes. Proc Natl Acad Sci U S A 2005
99
23

A Phenotype-Driven Approach to Generate Mouse Models with Pathogenic mtDNA Mutations Causing Mitochondrial Disease.
Johanna H K Kauppila, Holly L Baines, Ana Bratic, Marie-Lune Simard, Christoph Freyer, Arnaud Mourier, Craig Stamp, Roberta Filograna, Nils-Göran Larsson, Laura C Greaves,[...]. Cell Rep 2016
56
23

Development of a single-chain, quasi-dimeric zinc-finger nuclease for the selective degradation of mutated human mitochondrial DNA.
Michal Minczuk, Monika A Papworth, Jeffrey C Miller, Michael P Murphy, Aaron Klug. Nucleic Acids Res 2008
109
21

Segregation of mitochondrial DNA heteroplasmy through a developmental genetic bottleneck in human embryos.
Vasileios I Floros, Angela Pyle, Sabine Dietmann, Wei Wei, Walfred C W Tang, Naoko Irie, Brendan Payne, Antonio Capalbo, Laila Noli, Jonathan Coxhead,[...]. Nat Cell Biol 2018
81
21


Gene therapy for mitochondrial disease by delivering restriction endonuclease SmaI into mitochondria.
Masashi Tanaka, Harm-Jan Borgeld, Jin Zhang, Shin-ichi Muramatsu, Jian-Sheng Gong, Makoto Yoneda, Wakako Maruyama, Makoto Naoi, Tohru Ibi, Ko Sahashi,[...]. J Biomed Sci 2002
131
21

Super-resolution microscopy reveals that mammalian mitochondrial nucleoids have a uniform size and frequently contain a single copy of mtDNA.
Christian Kukat, Christian A Wurm, Henrik Spåhr, Maria Falkenberg, Nils-Göran Larsson, Stefan Jakobs. Proc Natl Acad Sci U S A 2011
294
20


Near-complete elimination of mutant mtDNA by iterative or dynamic dose-controlled treatment with mtZFNs.
Payam A Gammage, Edoardo Gaude, Lindsey Van Haute, Pedro Rebelo-Guiomar, Christopher B Jackson, Joanna Rorbach, Marcin L Pekalski, Alan J Robinson, Marine Charpentier, Jean-Paul Concordet,[...]. Nucleic Acids Res 2016
51
23

Sequence and organization of the human mitochondrial genome.
S Anderson, A T Bankier, B G Barrell, M H de Bruijn, A R Coulson, J Drouin, I C Eperon, D P Nierlich, B A Roe, F Sanger,[...]. Nature 1981
20

Mitochondrial DNA mutations and human disease.
Helen A L Tuppen, Emma L Blakely, Douglass M Turnbull, Robert W Taylor. Biochim Biophys Acta 2010
360
20


A bacterial cytidine deaminase toxin enables CRISPR-free mitochondrial base editing.
Beverly Y Mok, Marcos H de Moraes, Jun Zeng, Dustin E Bosch, Anna V Kotrys, Aditya Raguram, FoSheng Hsu, Matthew C Radey, S Brook Peterson, Vamsi K Mootha,[...]. Nature 2020
124
20

Loss-of-function mutations in MGME1 impair mtDNA replication and cause multisystemic mitochondrial disease.
Cornelia Kornblum, Thomas J Nicholls, Tobias B Haack, Susanne Schöler, Viktoriya Peeva, Katharina Danhauser, Kerstin Hallmann, Gábor Zsurka, Joanna Rorbach, Arcangela Iuso,[...]. Nat Genet 2013
131
18

Microhomology-mediated end joining is the principal mediator of double-strand break repair during mitochondrial DNA lesions.
Satish Kumar Tadi, Robin Sebastian, Sumedha Dahal, Ravi K Babu, Bibha Choudhary, Sathees C Raghavan. Mol Biol Cell 2016
72
18

mitoTev-TALE: a monomeric DNA editing enzyme to reduce mutant mitochondrial DNA levels.
Claudia V Pereira, Sandra R Bacman, Tania Arguello, Ugne Zekonyte, Sion L Williams, David R Edgell, Carlos T Moraes. EMBO Mol Med 2018
32
34

Oxidative stress induces degradation of mitochondrial DNA.
Inna Shokolenko, Natalia Venediktova, Alexandra Bochkareva, Glenn L Wilson, Mikhail F Alexeyev. Nucleic Acids Res 2009
287
18

Mice lacking the mitochondrial exonuclease MGME1 accumulate mtDNA deletions without developing progeria.
Stanka Matic, Min Jiang, Thomas J Nicholls, Jay P Uhler, Caren Dirksen-Schwanenland, Paola Loguercio Polosa, Marie-Lune Simard, Xinping Li, Ilian Atanassov, Oliver Rackham,[...]. Nat Commun 2018
28
35

High levels of mitochondrial DNA deletions in substantia nigra neurons in aging and Parkinson disease.
Andreas Bender, Kim J Krishnan, Christopher M Morris, Geoffrey A Taylor, Amy K Reeve, Robert H Perry, Evelyn Jaros, Joshua S Hersheson, Joanne Betts, Thomas Klopstock,[...]. Nat Genet 2006
976
16

Base-excision repair deficiency alone or combined with increased oxidative stress does not increase mtDNA point mutations in mice.
Johanna H K Kauppila, Nina A Bonekamp, Arnaud Mourier, Marita A Isokallio, Alexandra Just, Timo E S Kauppila, James B Stewart, Nils-Göran Larsson. Nucleic Acids Res 2018
30
33

Linear mtDNA fragments and unusual mtDNA rearrangements associated with pathological deficiency of MGME1 exonuclease.
Thomas J Nicholls, Gábor Zsurka, Viktoriya Peeva, Susanne Schöler, Roman J Szczesny, Dominik Cysewski, Aurelio Reyes, Cornelia Kornblum, Monica Sciacco, Maurizio Moggio,[...]. Hum Mol Genet 2014
39
23



Cross-strand binding of TFAM to a single mtDNA molecule forms the mitochondrial nucleoid.
Christian Kukat, Karen M Davies, Christian A Wurm, Henrik Spåhr, Nina A Bonekamp, Inge Kühl, Friederike Joos, Paola Loguercio Polosa, Chan Bae Park, Viktor Posse,[...]. Proc Natl Acad Sci U S A 2015
167
15

Mechanisms of Mitochondrial DNA Deletion Formation.
Nadee Nissanka, Michal Minczuk, Carlos T Moraes. Trends Genet 2019
27
33

No recombination of mtDNA after heteroplasmy for 50 generations in the mouse maternal germline.
Erik Hagström, Christoph Freyer, Brendan J Battersby, James B Stewart, Nils-Göran Larsson. Nucleic Acids Res 2014
58
13


The maintenance of mitochondrial DNA integrity--critical analysis and update.
Mikhail Alexeyev, Inna Shokolenko, Glenn Wilson, Susan LeDoux. Cold Spring Harb Perspect Biol 2013
241
13

Mitochondrial DNA mutation associated with Leber's hereditary optic neuropathy.
D C Wallace, G Singh, M T Lott, J A Hodge, T G Schurr, A M Lezza, L J Elsas, E K Nikoskelainen. Science 1988
13

Mitochondrial diseases.
Gráinne S Gorman, Patrick F Chinnery, Salvatore DiMauro, Michio Hirano, Yasutoshi Koga, Robert McFarland, Anu Suomalainen, David R Thorburn, Massimo Zeviani, Douglass M Turnbull. Nat Rev Dis Primers 2016
440
13

Mitochondrial DNA-deletion mutations accumulate intracellularly to detrimental levels in aged human skeletal muscle fibers.
Entela Bua, Jody Johnson, Allen Herbst, Bridget Delong, Debbie McKenzie, Shahriar Salamat, Judd M Aiken. Am J Hum Genet 2006
278
13

Mutant mitochondrial helicase Twinkle causes multiple mtDNA deletions and a late-onset mitochondrial disease in mice.
Henna Tyynismaa, Katja Peltola Mjosund, Sjoerd Wanrooij, Ilse Lappalainen, Emil Ylikallio, Anu Jalanko, Johannes N Spelbrink, Anders Paetau, Anu Suomalainen. Proc Natl Acad Sci U S A 2005
219
13

Mitochondrial DNA mutations, oxidative stress, and apoptosis in mammalian aging.
G C Kujoth, A Hiona, T D Pugh, S Someya, K Panzer, S E Wohlgemuth, T Hofer, A Y Seo, R Sullivan, W A Jobling,[...]. Science 2005
13

Mitochondrial threshold effects.
Rodrigue Rossignol, Benjamin Faustin, Christophe Rocher, Monique Malgat, Jean-Pierre Mazat, Thierry Letellier. Biochem J 2003
455
13


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.