A citation-based method for searching scientific literature

Tamim H Shaikh. Curr Genet Med Rep 2017
Times Cited: 10







List of co-cited articles
15 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A copy number variation map of the human genome.
Mehdi Zarrei, Jeffrey R MacDonald, Daniele Merico, Stephen W Scherer. Nat Rev Genet 2015
368
30

Human copy number variation and complex genetic disease.
Santhosh Girirajan, Catarina D Campbell, Evan E Eichler. Annu Rev Genet 2011
207
20

Copy number variation in human health, disease, and evolution.
Feng Zhang, Wenli Gu, Matthew E Hurles, James R Lupski. Annu Rev Genomics Hum Genet 2009
693
20

Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources.
Sebastian Köhler, Leigh Carmody, Nicole Vasilevsky, Julius O B Jacobsen, Daniel Danis, Jean-Philippe Gourdine, Michael Gargano, Nomi L Harris, Nicolas Matentzoglu, Julie A McMurry,[...]. Nucleic Acids Res 2019
226
20

The implications of human metabolic network topology for disease comorbidity.
D-S Lee, J Park, K A Kay, N A Christakis, Z N Oltvai, A-L Barabási. Proc Natl Acad Sci U S A 2008
294
20

The human disease network.
Kwang-Il Goh, Michael E Cusick, David Valle, Barton Childs, Marc Vidal, Albert-László Barabási. Proc Natl Acad Sci U S A 2007
20

Characterization of clinical signs in the human interactome.
Monica Chagoyen, Florencio Pazos. Bioinformatics 2016
6
33

Using networks to measure similarity between genes: association index selection.
Juan I Fuxman Bass, Alos Diallo, Justin Nelson, Juan M Soto, Chad L Myers, Albertha J M Walhout. Nat Methods 2013
110
20

Systematic identification of phenotypically enriched loci using a patient network of genomic disorders.
Armando Reyes-Palomares, Aníbal Bueno, Rocío Rodríguez-López, Miguel Ángel Medina, Francisca Sánchez-Jiménez, Manuel Corpas, Juan A G Ranea. BMC Genomics 2016
5
40

Human symptoms-disease network.
XueZhong Zhou, Jörg Menche, Albert-László Barabási, Amitabh Sharma. Nat Commun 2014
233
20

Clinical utility of noninvasive prenatal screening for expanded chromosome disease syndromes.
Desheng Liang, David S Cram, Hu Tan, Siyuan Linpeng, Yingdi Liu, Huaiyu Sun, Yu Zhang, Feng Tian, Hongmin Zhu, Mengnan Xu,[...]. Genet Med 2019
52
20

DECIPHER: Database of Chromosomal Imbalance and Phenotype in Humans Using Ensembl Resources.
Helen V Firth, Shola M Richards, A Paul Bevan, Stephen Clayton, Manuel Corpas, Diana Rajan, Steven Van Vooren, Yves Moreau, Roger M Pettett, Nigel P Carter. Am J Hum Genet 2009
920
20

SG-ADVISER CNV: copy-number variant annotation and interpretation.
Galina A Erikson, Neha Deshpande, Balachandar G Kesavan, Ali Torkamani. Genet Med 2015
17
20

The Database of Genomic Variants: a curated collection of structural variation in the human genome.
Jeffrey R MacDonald, Robert Ziman, Ryan K C Yuen, Lars Feuk, Stephen W Scherer. Nucleic Acids Res 2014
632
20

Technical standards for the interpretation and reporting of constitutional copy-number variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics (ACMG) and the Clinical Genome Resource (ClinGen).
Erin Rooney Riggs, Erica F Andersen, Athena M Cherry, Sibel Kantarci, Hutton Kearney, Ankita Patel, Gordana Raca, Deborah I Ritter, Sarah T South, Erik C Thorland,[...]. Genet Med 2020
136
20

Using SNP array to identify aneuploidy and segmental imbalance in translocation carriers.
B Xiong, K Tan, Y Q Tan, F Gong, S P Zhang, C F Lu, K L Luo, G X Lu, G Lin. Genom Data 2014
9
11

A modified multiplex ligation-dependent probe amplification method for the detection of 22q11.2 copy number variations in patients with congenital heart disease.
Xiaoqing Zhang, Yuejuan Xu, Deyuan Liu, Juan Geng, Sun Chen, Zhengwen Jiang, Qihua Fu, Kun Sun. BMC Genomics 2015
29
10

A computational framework discovers new copy number variants with functional importance.
Samprit Banerjee, Derek Oldridge, Maria Poptsova, Wasay M Hussain, Dimple Chakravarty, Francesca Demichelis. PLoS One 2011
13
10

Evaluation of copy number variation detection for a SNP array platform.
Xin Zhang, Renqian Du, Shilin Li, Feng Zhang, Li Jin, Hongyan Wang. BMC Bioinformatics 2014
26
10

Identification of copy number variants from exome sequence data.
Pubudu Saneth Samarakoon, Hanne Sørmo Sorte, Bjørn Evert Kristiansen, Tove Skodje, Ying Sheng, Geir E Tjønnfjord, Barbro Stadheim, Asbjørg Stray-Pedersen, Olaug Kristin Rødningen, Robert Lyle. BMC Genomics 2014
38
10



Chromosome 22q11.2 deletion syndrome: prenatal diagnosis, array comparative genomic hybridization characterization using uncultured amniocytes and literature review.
Chih-Ping Chen, Jian-Pei Huang, Yi-Yung Chen, Schu-Rern Chern, Peih-Shan Wu, Jun-Wei Su, Yu-Ting Chen, Wen-Lin Chen, Wayseen Wang. Gene 2013
13
10

Representing genetic variation with synthetic DNA standards.
Ira W Deveson, Wendy Y Chen, Ted Wong, Simon A Hardwick, Stacey B Andersen, Lars K Nielsen, John S Mattick, Tim R Mercer. Nat Methods 2016
18
10

Copy Number Variation detection from 1000 Genomes Project exon capture sequencing data.
Jiantao Wu, Krzysztof R Grzeda, Chip Stewart, Fabian Grubert, Alexander E Urban, Michael P Snyder, Gabor T Marth. BMC Bioinformatics 2012
19
10

Cloud-based bioinformatics workflow platform for large-scale next-generation sequencing analyses.
Bo Liu, Ravi K Madduri, Borja Sotomayor, Kyle Chard, Lukasz Lacinski, Utpal J Dave, Jianqiang Li, Chunchen Liu, Ian T Foster. J Biomed Inform 2014
28
10

Relative quantification of 40 nucleic acid sequences by multiplex ligation-dependent probe amplification.
Jan P Schouten, Cathal J McElgunn, Raymond Waaijer, Danny Zwijnenburg, Filip Diepvens, Gerard Pals. Nucleic Acids Res 2002
10

Association of structural and numerical anomalies of chromosome 22 in a patient with syndromic intellectual disability.
Rania Naoufal, Marine Legendre, Dominique Couet, Brigitte Gilbert-Dussardier, Alain Kitzis, Frederic Bilan, Radu Harbuz. Eur J Med Genet 2016
2
50

Comparative study of exome copy number variation estimation tools using array comparative genomic hybridization as control.
Yan Guo, Quanghu Sheng, David C Samuels, Brian Lehmann, Joshua A Bauer, Jennifer Pietenpol, Yu Shyr. Biomed Res Int 2013
34
10

Whole-Exome Sequencing in the Differential Diagnosis of Primary Adrenal Insufficiency in Children.
Li F Chan, Daniel C Campbell, Tatiana V Novoselova, Adrian J L Clark, Louise A Metherell. Front Endocrinol (Lausanne) 2015
25
10

Variability in interpreting and reporting copy number changes detected by array-based technology in clinical laboratories.
Karen D Tsuchiya, Lisa G Shaffer, Swaroop Aradhya, Julie M Gastier-Foster, Ankita Patel, M Katharine Rudd, Julie Sanford Biggerstaff, Warren G Sanger, Stuart Schwartz, James H Tepperberg,[...]. Genet Med 2009
41
10

Detection of clinically relevant copy number variants with whole-exome sequencing.
Joep de Ligt, Philip M Boone, Rolph Pfundt, Lisenka E L M Vissers, Todd Richmond, Joel Geoghegan, Kathleen O'Moore, Nicole de Leeuw, Christine Shaw, Han G Brunner,[...]. Hum Mutat 2013
78
10

Platform comparison of detecting copy number variants with microarrays and whole-exome sequencing.
Joep de Ligt, Philip M Boone, Rolph Pfundt, Lisenka E L M Vissers, Nicole de Leeuw, Christine Shaw, Han G Brunner, James R Lupski, Joris A Veltman, Jayne Y Hehir-Kwa. Genom Data 2014
10
10

Molecular cytogenetics and cytogenomics of brain diseases.
I Y Iourov, S G Vorsanova, Y B Yurov. Curr Genomics 2008
44
10

Methods to detect CNVs in the human genome.
E Aten, S J White, M E Kalf, R H A M Vossen, H H Thygesen, C A Ruivenkamp, M Kriek, M H B Breuning, J T den Dunnen. Cytogenet Genome Res 2008
22
10

Multiplex ligation-dependent probe amplification for genetic screening in autism spectrum disorders: efficient identification of known microduplications and identification of a novel microduplication in ASMT.
Guiqing Cai, Lisa Edelmann, Juliet E Goldsmith, Ninette Cohen, Alisa Nakamine, Jennifer G Reichert, Ellen J Hoffman, Danielle M Zurawiecki, Jeremy M Silverman, Eric Hollander,[...]. BMC Med Genomics 2008
62
10

CNV-guided multi-read allocation for ChIP-seq.
Qi Zhang, Sündüz Keleş. Bioinformatics 2014
5
20

Simultaneous MLPA-based multiplex point mutation and deletion analysis of the dystrophin gene.
David J Bunyan, Alison C Skinner, Emma J Ashton, Julie Sillibourne, Tom Brown, Amanda L Collins, Nicholas C P Cross, John F Harvey, David O Robinson. Mol Biotechnol 2007
18
10

Microarray-based optimization to detect genomic deletion mutations.
Eric J Belfield, Carly Brown, Xiangchao Gan, Caifu Jiang, Dilair Baban, Aziz Mithani, Richard Mott, Jiannis Ragoussis, Nicholas P Harberd. Genom Data 2014
1
100

Discovery and statistical genotyping of copy-number variation from whole-exome sequencing depth.
Menachem Fromer, Jennifer L Moran, Kimberly Chambert, Eric Banks, Sarah E Bergen, Douglas M Ruderfer, Robert E Handsaker, Steven A McCarroll, Michael C O'Donovan, Michael J Owen,[...]. Am J Hum Genet 2012
331
10

Copy number variation detection using next generation sequencing read counts.
Heng Wang, Dan Nettleton, Kai Ying. BMC Bioinformatics 2014
51
10

Improved testing for CMT1A and HNPP using multiplex ligation-dependent probe amplification (MLPA) with rapid DNA preparations: comparison with the interphase FISH method.
Howard Slater, Damien Bruno, Hua Ren, Phung La, Trent Burgess, Louise Hills, Sara Nouri, Jan Schouten, K H Andy Choo. Hum Mutat 2004
48
10


Whole-Genome Sequencing and Integrative Genomic Analysis Approach on Two 22q11.2 Deletion Syndrome Family Trios for Genotype to Phenotype Correlations.
Jonathan H Chung, Jinlu Cai, Barrie G Suskin, Zhengdong Zhang, Karlene Coleman, Bernice E Morrow. Hum Mutat 2015
9
11

Mechanisms of change in gene copy number.
P J Hastings, James R Lupski, Susan M Rosenberg, Grzegorz Ira. Nat Rev Genet 2009
718
10

Detection and calibration of microdeletions and microduplications by array-based comparative genomic hybridization and its applicability to clinical genetic testing.
Andrew Wong, Christa Lese Martin, Konstantina Heretis, Teresa Ruffalo, Kim Wilber, Walter King, David H Ledbetter. Genet Med 2005
21
10


An evaluation of copy number variation detection tools from whole-exome sequencing data.
Renjie Tan, Yadong Wang, Sarah E Kleinstein, Yongzhuang Liu, Xiaolin Zhu, Hongzhe Guo, Qinghua Jiang, Andrew S Allen, Mingfu Zhu. Hum Mutat 2014
123
10

Use of the MLPA assay in the molecular diagnosis of gene copy number alterations in human genetic diseases.
Liborio Stuppia, Ivana Antonucci, Giandomenico Palka, Valentina Gatta. Int J Mol Sci 2012
100
10

Minimum regions of genomic imbalance in stage I testicular embryonal carcinoma and association of 22q loss with relapse.
Duncan C Gilbert, Alan McIntyre, Brenda Summersgill, Edoardo Missiaglia, Neil C Goddard, Ian Chandler, Robert A Huddart, Janet Shipley. Genes Chromosomes Cancer 2011
18
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.