A citation-based method for searching scientific literature

Steve Horvath, Dan J Stein, Nicole Phillips, Sarah J Heany, Michael S Kobor, David T S Lin, Landon Myer, Heather J Zar, Andrew J Levine, Jacqueline Hoare. AIDS 2018
Times Cited: 44







List of co-cited articles
272 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



HIV-1 Infection Accelerates Age According to the Epigenetic Clock.
Steve Horvath, Andrew J Levine. J Infect Dis 2015
276
56


DNA methylation-based measures of biological age: meta-analysis predicting time to death.
Brian H Chen, Riccardo E Marioni, Elena Colicino, Marjolein J Peters, Cavin K Ward-Caviness, Pei-Chien Tsai, Nicholas S Roetker, Allan C Just, Ellen W Demerath, Weihua Guan,[...]. Aging (Albany NY) 2016
456
38

An epigenetic biomarker of aging for lifespan and healthspan.
Morgan E Levine, Ake T Lu, Austin Quach, Brian H Chen, Themistocles L Assimes, Stefania Bandinelli, Lifang Hou, Andrea A Baccarelli, James D Stewart, Yun Li,[...]. Aging (Albany NY) 2018
546
34

DNA methylation GrimAge strongly predicts lifespan and healthspan.
Ake T Lu, Austin Quach, James G Wilson, Alex P Reiner, Abraham Aviv, Kenneth Raj, Lifang Hou, Andrea A Baccarelli, Yun Li, James D Stewart,[...]. Aging (Albany NY) 2019
348
34

Methylome-wide Analysis of Chronic HIV Infection Reveals Five-Year Increase in Biological Age and Epigenetic Targeting of HLA.
Andrew M Gross, Philipp A Jaeger, Jason F Kreisberg, Katherine Licon, Kristen L Jepsen, Mahdieh Khosroheidari, Brenda M Morsey, Susan Swindells, Hui Shen, Cherie T Ng,[...]. Mol Cell 2016
157
29

Accelerated epigenetic aging in brain is associated with pre-mortem HIV-associated neurocognitive disorders.
Andrew J Levine, Austin Quach, David J Moore, Cristian L Achim, Virawudh Soontornniyomkij, Eliezer Masliah, Elyse J Singer, Benjamin Gelman, Natasha Nemanim, Steve Horvath. J Neurovirol 2016
76
27

Epigenetic age acceleration predicts cancer, cardiovascular, and all-cause mortality in a German case cohort.
Laura Perna, Yan Zhang, Ute Mons, Bernd Holleczek, Kai-Uwe Saum, Hermann Brenner. Clin Epigenetics 2016
266
27

Genome-wide methylation profiles reveal quantitative views of human aging rates.
Gregory Hannum, Justin Guinney, Ling Zhao, Li Zhang, Guy Hughes, SriniVas Sadda, Brandy Klotzle, Marina Bibikova, Jian-Bing Fan, Yuan Gao,[...]. Mol Cell 2013
25

WGCNA: an R package for weighted correlation network analysis.
Peter Langfelder, Steve Horvath. BMC Bioinformatics 2008
22

DNA methylation age of blood predicts all-cause mortality in later life.
Riccardo E Marioni, Sonia Shah, Allan F McRae, Brian H Chen, Elena Colicino, Sarah E Harris, Jude Gibson, Anjali K Henders, Paul Redmond, Simon R Cox,[...]. Genome Biol 2015
569
22

Using DNA Methylation Profiling to Evaluate Biological Age and Longevity Interventions.
Daniel A Petkovich, Dmitriy I Podolskiy, Alexei V Lobanov, Sang-Goo Lee, Richard A Miller, Vadim N Gladyshev. Cell Metab 2017
141
20

Biological Age Predictors.
Juulia Jylhävä, Nancy L Pedersen, Sara Hägg. EBioMedicine 2017
313
20

An epigenetic clock analysis of race/ethnicity, sex, and coronary heart disease.
Steve Horvath, Michael Gurven, Morgan E Levine, Benjamin C Trumble, Hillard Kaplan, Hooman Allayee, Beate R Ritz, Brian Chen, Ake T Lu, Tammy M Rickabaugh,[...]. Genome Biol 2016
313
20

DNA methylation aging clocks: challenges and recommendations.
Christopher G Bell, Robert Lowe, Peter D Adams, Andrea A Baccarelli, Stephan Beck, Jordana T Bell, Brock C Christensen, Vadim N Gladyshev, Bastiaan T Heijmans, Steve Horvath,[...]. Genome Biol 2019
195
20

The National NeuroAIDS Tissue Consortium: a new paradigm in brain banking with an emphasis on infectious disease.
S Morgello, B B Gelman, P B Kozlowski, H V Vinters, E Masliah, M Cornford, W Cavert, C Marra, I Grant, E J Singer. Neuropathol Appl Neurobiol 2001
119
20

An analysis of the relationship between metabolism, developmental schedules, and longevity using phylogenetic independent contrasts.
João Pedro de Magalhães, Joana Costa, George M Church. J Gerontol A Biol Sci Med Sci 2007
163
20

SeSAMe: reducing artifactual detection of DNA methylation by Infinium BeadChips in genomic deletions.
Wanding Zhou, Timothy J Triche, Peter W Laird, Hui Shen. Nucleic Acids Res 2018
69
20

The hallmarks of aging.
Carlos López-Otín, Maria A Blasco, Linda Partridge, Manuel Serrano, Guido Kroemer. Cell 2013
18

Age-dependent DNA methylation of genes that are suppressed in stem cells is a hallmark of cancer.
Andrew E Teschendorff, Usha Menon, Aleksandra Gentry-Maharaj, Susan J Ramus, Daniel J Weisenberger, Hui Shen, Mihaela Campan, Houtan Noushmehr, Christopher G Bell, A Peter Maxwell,[...]. Genome Res 2010
550
18

Low-level processing of Illumina Infinium DNA Methylation BeadArrays.
Timothy J Triche, Daniel J Weisenberger, David Van Den Berg, Peter W Laird, Kimberly D Siegmund. Nucleic Acids Res 2013
352
18

DNA methylation arrays as surrogate measures of cell mixture distribution.
Eugene Andres Houseman, William P Accomando, Devin C Koestler, Brock C Christensen, Carmen J Marsit, Heather H Nelson, John K Wiencke, Karl T Kelsey. BMC Bioinformatics 2012
18

Menopause accelerates biological aging.
Morgan E Levine, Ake T Lu, Brian H Chen, Dena G Hernandez, Andrew B Singleton, Luigi Ferrucci, Stefania Bandinelli, Elias Salfati, JoAnn E Manson, Austin Quach,[...]. Proc Natl Acad Sci U S A 2016
187
18

DNA methylation age is associated with mortality in a longitudinal Danish twin study.
Lene Christiansen, Adam Lenart, Qihua Tan, James W Vaupel, Abraham Aviv, Matt McGue, Kaare Christensen. Aging Cell 2016
182
18

Reversal of epigenetic aging and immunosenescent trends in humans.
Gregory M Fahy, Robert T Brooke, James P Watson, Zinaida Good, Shreyas S Vasanawala, Holden Maecker, Michael D Leipold, David T S Lin, Michael S Kobor, Steve Horvath. Aging Cell 2019
135
18

GREAT improves functional interpretation of cis-regulatory regions.
Cory Y McLean, Dave Bristor, Michael Hiller, Shoa L Clarke, Bruce T Schaar, Craig B Lowe, Aaron M Wenger, Gill Bejerano. Nat Biotechnol 2010
18

Epigenetic ageing is distinct from senescence-mediated ageing and is not prevented by telomerase expression.
Sylwia Kabacik, Steve Horvath, Howard Cohen, Kenneth Raj. Aging (Albany NY) 2018
33
24

Acceleration of age-associated methylation patterns in HIV-1-infected adults.
Tammy M Rickabaugh, Ruth M Baxter, Mary Sehl, Janet S Sinsheimer, Patricia M Hultin, Lance E Hultin, Austin Quach, Otoniel Martínez-Maza, Steve Horvath, Eric Vilain,[...]. PLoS One 2015
72
15

Multi-tissue DNA methylation age predictor in mouse.
Thomas M Stubbs, Marc Jan Bonder, Anne-Katrien Stark, Felix Krueger, Ferdinand von Meyenn, Oliver Stegle, Wolf Reik. Genome Biol 2017
166
15

Epigenetic clock for skin and blood cells applied to Hutchinson Gilford Progeria Syndrome and ex vivo studies.
Steve Horvath, Junko Oshima, George M Martin, Ake T Lu, Austin Quach, Howard Cohen, Sarah Felton, Mieko Matsuyama, Donna Lowe, Sylwia Kabacik,[...]. Aging (Albany NY) 2018
152
15

Human aging-associated DNA hypermethylation occurs preferentially at bivalent chromatin domains.
Vardhman K Rakyan, Thomas A Down, Siarhei Maslau, Toby Andrew, Tsun-Po Yang, Huriya Beyan, Pamela Whittaker, Owen T McCann, Sarah Finer, Ana M Valdes,[...]. Genome Res 2010
474
15

Epigenetic aging signatures in mice livers are slowed by dwarfism, calorie restriction and rapamycin treatment.
Tina Wang, Brian Tsui, Jason F Kreisberg, Neil A Robertson, Andrew M Gross, Michael Ku Yu, Hannah Carter, Holly M Brown-Borg, Peter D Adams, Trey Ideker. Genome Biol 2017
127
15

Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays.
Martin J Aryee, Andrew E Jaffe, Hector Corrada-Bravo, Christine Ladd-Acosta, Andrew P Feinberg, Kasper D Hansen, Rafael A Irizarry. Bioinformatics 2014
15

The epigenetic clock is correlated with physical and cognitive fitness in the Lothian Birth Cohort 1936.
Riccardo E Marioni, Sonia Shah, Allan F McRae, Stuart J Ritchie, Graciela Muniz-Terrera, Sarah E Harris, Jude Gibson, Paul Redmond, Simon R Cox, Alison Pattie,[...]. Int J Epidemiol 2015
289
15

A whole lifespan mouse multi-tissue DNA methylation clock.
Margarita V Meer, Dmitriy I Podolskiy, Alexander Tyshkovskiy, Vadim N Gladyshev. Elife 2018
47
15

Diverse interventions that extend mouse lifespan suppress shared age-associated epigenetic changes at critical gene regulatory regions.
John J Cole, Neil A Robertson, Mohammed Iqbal Rather, John P Thomson, Tony McBryan, Duncan Sproul, Tina Wang, Claire Brock, William Clark, Trey Ideker,[...]. Genome Biol 2017
93
13

Premature age-related comorbidities among HIV-infected persons compared with the general population.
Giovanni Guaraldi, Gabriella Orlando, Stefano Zona, Marianna Menozzi, Federica Carli, Elisa Garlassi, Alessandra Berti, Elisa Rossi, Alberto Roverato, Frank Palella. Clin Infect Dis 2011
804
13

Obesity accelerates epigenetic aging of human liver.
Steve Horvath, Wiebke Erhart, Mario Brosch, Ole Ammerpohl, Witigo von Schönfels, Markus Ahrens, Nils Heits, Jordana T Bell, Pei-Chien Tsai, Tim D Spector,[...]. Proc Natl Acad Sci U S A 2014
384
13

Longitudinal trajectories, correlations and mortality associations of nine biological ages across 20-years follow-up.
Xia Li, Alexander Ploner, Yunzhang Wang, Patrik Ke Magnusson, Chandra Reynolds, Deborah Finkel, Nancy L Pedersen, Juulia Jylhävä, Sara Hägg. Elife 2020
69
13


Identification of HIV infection-related DNA methylation sites and advanced epigenetic aging in HIV-positive, treatment-naive U.S. veterans.
Kristin N Nelson, Qin Hui, David Rimland, Ke Xu, Matthew S Freiberg, Amy C Justice, Vincent C Marconi, Yan V Sun. AIDS 2017
34
17

Decreased epigenetic age of PBMCs from Italian semi-supercentenarians and their offspring.
Steve Horvath, Chiara Pirazzini, Maria Giulia Bacalini, Davide Gentilini, Anna Maria Di Blasio, Massimo Delledonne, Daniela Mari, Beatrice Arosio, Daniela Monti, Giuseppe Passarino,[...]. Aging (Albany NY) 2015
164
13

DNA Methylation Clocks in Aging: Categories, Causes, and Consequences.
Adam E Field, Neil A Robertson, Tina Wang, Aaron Havas, Trey Ideker, Peter D Adams. Mol Cell 2018
189
13

A multi-tissue full lifespan epigenetic clock for mice.
Michael J Thompson, Karolina Chwiałkowska, Liudmilla Rubbi, Aldons J Lusis, Richard C Davis, Anuj Srivastava, Ron Korstanje, Gary A Churchill, Steve Horvath, Matteo Pellegrini. Aging (Albany NY) 2018
53
13

Accelerated epigenetic aging in Down syndrome.
Steve Horvath, Paolo Garagnani, Maria Giulia Bacalini, Chiara Pirazzini, Stefano Salvioli, Davide Gentilini, Anna Maria Di Blasio, Cristina Giuliani, Spencer Tung, Harry V Vinters,[...]. Aging Cell 2015
261
11

Accelerated epigenetic aging in Werner syndrome.
Anna Maierhofer, Julia Flunkert, Junko Oshima, George M Martin, Thomas Haaf, Steve Horvath. Aging (Albany NY) 2017
91
11


Frailty is associated with the epigenetic clock but not with telomere length in a German cohort.
Lutz Philipp Breitling, Kai-Uwe Saum, Laura Perna, Ben Schöttker, Bernd Holleczek, Hermann Brenner. Clin Epigenetics 2016
164
11

Regularization Paths for Generalized Linear Models via Coordinate Descent.
Jerome Friedman, Trevor Hastie, Rob Tibshirani. J Stat Softw 2010
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.