A citation-based method for searching scientific literature

Dezerae Cox, Candice Raeburn, Xiaojing Sui, Danny M Hatters. Semin Cell Dev Biol 2020
Times Cited: 15







List of co-cited articles
28 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Proteostasis impairment in protein-misfolding and -aggregation diseases.
Mark S Hipp, Sae-Hun Park, F Ulrich Hartl. Trends Cell Biol 2014
363
20

Widespread Proteome Remodeling and Aggregation in Aging C. elegans.
Dirk M Walther, Prasad Kasturi, Min Zheng, Stefan Pinkert, Giulia Vecchi, Prajwal Ciryam, Richard I Morimoto, Christopher M Dobson, Michele Vendruscolo, Matthias Mann,[...]. Cell 2015
294
20

Protein aggregation and neurodegenerative disease.
Christopher A Ross, Michelle A Poirier. Nat Med 2004
20

Converging concepts of protein folding in vitro and in vivo.
F Ulrich Hartl, Manajit Hayer-Hartl. Nat Struct Mol Biol 2009
695
13

Role of sHsps in organizing cytosolic protein aggregation and disaggregation.
Axel Mogk, Bernd Bukau. Cell Stress Chaperones 2017
50
13


Quantitative analysis of HSP90-client interactions reveals principles of substrate recognition.
Mikko Taipale, Irina Krykbaeva, Martina Koeva, Can Kayatekin, Kenneth D Westover, Georgios I Karras, Susan Lindquist. Cell 2012
510
13

A novel link between autophagy and the ubiquitin-proteasome system.
Viktor I Korolchuk, Fiona M Menzies, David C Rubinsztein. Autophagy 2009
92
13

Intracellular protein aggregation is a proximal trigger of cardiomyocyte autophagy.
Paul Tannous, Hongxin Zhu, Andriy Nemchenko, Jeff M Berry, Janet L Johnstone, John M Shelton, Francis J Miller, Beverly A Rothermel, Joseph A Hill. Circulation 2008
173
13


Relationship between the proteasomal system and autophagy.
Alain Lilienbaum. Int J Biochem Mol Biol 2013
201
13

ULK1.ATG13.FIP200 complex mediates mTOR signaling and is essential for autophagy.
Ian G Ganley, Du H Lam, Junru Wang, Xiaojun Ding, She Chen, Xuejun Jiang. J Biol Chem 2009
903
13

Nutrient-dependent mTORC1 association with the ULK1-Atg13-FIP200 complex required for autophagy.
Nao Hosokawa, Taichi Hara, Takeshi Kaizuka, Chieko Kishi, Akito Takamura, Yutaka Miura, Shun-ichiro Iemura, Tohru Natsume, Kenji Takehana, Naoyuki Yamada,[...]. Mol Biol Cell 2009
13

The role of Atg proteins in autophagosome formation.
Noboru Mizushima, Tamotsu Yoshimori, Yoshinori Ohsumi. Annu Rev Cell Dev Biol 2011
13

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
13

p62 links the autophagy pathway and the ubiqutin-proteasome system upon ubiquitinated protein degradation.
Wei Jing Liu, Lin Ye, Wei Fang Huang, Lin Jie Guo, Zi Gan Xu, Hong Luan Wu, Chen Yang, Hua Feng Liu. Cell Mol Biol Lett 2016
296
13

Tracking protein aggregation and mislocalization in cells with flow cytometry.
Yasmin M Ramdzan, Saskia Polling, Cheryl P Z Chia, Ivan H W Ng, Angelique R Ormsby, Nathan P Croft, Anthony W Purcell, Marie A Bogoyevitch, Dominic C H Ng, Paul A Gleeson,[...]. Nat Methods 2012
71
13

Huntingtin Inclusions Trigger Cellular Quiescence, Deactivate Apoptosis, and Lead to Delayed Necrosis.
Yasmin M Ramdzan, Mikhail M Trubetskov, Angelique R Ormsby, Estella A Newcombe, Xiaojing Sui, Mark J Tobin, Marie N Bongiovanni, Sally L Gras, Grant Dewson, Jason M L Miller,[...]. Cell Rep 2017
61
13

Ubiquitinated TDP-43 in frontotemporal lobar degeneration and amyotrophic lateral sclerosis.
Manuela Neumann, Deepak M Sampathu, Linda K Kwong, Adam C Truax, Matthew C Micsenyi, Thomas T Chou, Jennifer Bruce, Theresa Schuck, Murray Grossman, Christopher M Clark,[...]. Science 2006
13

The C9orf72 repeat expansion disrupts nucleocytoplasmic transport.
Ke Zhang, Christopher J Donnelly, Aaron R Haeusler, Jonathan C Grima, James B Machamer, Peter Steinwald, Elizabeth L Daley, Sean J Miller, Kathleen M Cunningham, Svetlana Vidensky,[...]. Nature 2015
566
13

Cytoplasmic protein aggregates interfere with nucleocytoplasmic transport of protein and RNA.
Andreas C Woerner, Frédéric Frottin, Daniel Hornburg, Li R Feng, Felix Meissner, Maria Patra, Jörg Tatzelt, Matthias Mann, Konstanze F Winklhofer, F Ulrich Hartl,[...]. Science 2016
241
13

Aggregation of huntingtin in neuronal intranuclear inclusions and dystrophic neurites in brain.
M DiFiglia, E Sapp, K O Chase, S W Davies, G P Bates, J P Vonsattel, N Aronin. Science 1997
13

A Molecular Grammar Governing the Driving Forces for Phase Separation of Prion-like RNA Binding Proteins.
Jie Wang, Jeong-Mo Choi, Alex S Holehouse, Hyun O Lee, Xiaojie Zhang, Marcus Jahnel, Shovamayee Maharana, Régis Lemaitre, Andrei Pozniakovsky, David Drechsel,[...]. Cell 2018
522
13

Aggresomes: a cellular response to misfolded proteins.
J A Johnston, C L Ward, R R Kopito. J Cell Biol 1998
13

Regulation of heat shock transcription factors and their roles in physiology and disease.
Rocio Gomez-Pastor, Eileen T Burchfiel, Dennis J Thiele. Nat Rev Mol Cell Biol 2018
234
13

Self-assembly of polyglutamine-containing huntingtin fragments into amyloid-like fibrils: implications for Huntington's disease pathology.
E Scherzinger, A Sittler, K Schweiger, V Heiser, R Lurz, R Hasenbank, G P Bates, H Lehrach, E E Wanker. Proc Natl Acad Sci U S A 1999
521
13

IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content.
Zsuzsanna Dosztányi, Veronika Csizmok, Peter Tompa, István Simon. Bioinformatics 2005
13

The ribosome as a hub for protein quality control.
Sebastian Pechmann, Felix Willmund, Judith Frydman. Mol Cell 2013
173
13

Involvement of 70-kD heat-shock proteins in peroxisomal import.
P A Walton, M Wendland, S Subramani, R A Rachubinski, W J Welch. J Cell Biol 1994
110
6

Misfolding caused by the pathogenic mutation G47R on the minor allele of alanine:glyoxylate aminotransferase and chaperoning activity of pyridoxine.
Riccardo Montioli, Elisa Oppici, Mirco Dindo, Alessandro Roncador, Giovanni Gotte, Barbara Cellini, Carla Borri Voltattorni. Biochim Biophys Acta 2015
12
8

Molecular defects of the glycine 41 variants of alanine glyoxylate aminotransferase associated with primary hyperoxaluria type I.
Barbara Cellini, Riccardo Montioli, Alessandro Paiardini, Antonio Lorenzetto, Fabio Maset, Tiziana Bellini, Elisa Oppici, Carla Borri Voltattorni. Proc Natl Acad Sci U S A 2010
45
6

ATP-bound states of GroEL captured by cryo-electron microscopy.
N A Ranson, G W Farr, A M Roseman, B Gowen, W A Fenton, A L Horwich, H R Saibil. Cell 2001
216
6

Defining the TRiC/CCT interactome links chaperonin function to stabilization of newly made proteins with complex topologies.
Alice Y Yam, Yu Xia, Hen-Tzu Jill Lin, Alma Burlingame, Mark Gerstein, Judith Frydman. Nat Struct Mol Biol 2008
223
6

Pharmacologic rescue of an enzyme-trafficking defect in primary hyperoxaluria 1.
Non Miyata, Janos Steffen, Meghan E Johnson, Sonia Fargue, Christopher J Danpure, Carla M Koehler. Proc Natl Acad Sci U S A 2014
37
6

The HSP90 chaperone machinery.
Florian H Schopf, Maximilian M Biebl, Johannes Buchner. Nat Rev Mol Cell Biol 2017
523
6

Structure and dynamics of the ATP-bound open conformation of Hsp70 chaperones.
Roman Kityk, Jürgen Kopp, Irmgard Sinning, Matthias P Mayer. Mol Cell 2012
254
6



GroEL stimulates protein folding through forced unfolding.
Zong Lin, Damian Madan, Hays S Rye. Nat Struct Mol Biol 2008
116
6

A global view of Hsp90 functions.
Gabriela Chiosis, Chad A Dickey, Jill L Johnson. Nat Struct Mol Biol 2013
45
6

A DNAJB chaperone subfamily with HDAC-dependent activities suppresses toxic protein aggregation.
Jurre Hageman, Maria A Rujano, Maria A W H van Waarde, Vaishali Kakkar, Ron P Dirks, Natalia Govorukhina, Henderika M J Oosterveld-Hut, Nicolette H Lubsen, Harm H Kampinga. Mol Cell 2010
192
6


Primary hyperoxaluria.
A W MCLAURIN, W R BEISEL, G J MCCORMICK, R SCALETTAR, R H HERMAN. Ann Intern Med 1961
46
6

Structural characterization of the substrate transfer mechanism in Hsp70/Hsp90 folding machinery mediated by Hop.
Sara Alvira, Jorge Cuéllar, Alina Röhl, Soh Yamamoto, Hideaki Itoh, Carlos Alfonso, Germán Rivas, Johannes Buchner, José M Valpuesta. Nat Commun 2014
77
6

Hsp90 & Co. - a holding for folding.
J Buchner. Trends Biochem Sci 1999
511
6

The GroEL-GroES Chaperonin Machine: A Nano-Cage for Protein Folding.
Manajit Hayer-Hartl, Andreas Bracher, F Ulrich Hartl. Trends Biochem Sci 2016
162
6

Ligand-induced compaction of the PEX5 receptor-binding cavity impacts protein import efficiency into peroxisomes.
Krisztián Fodor, Janina Wolf, Katharina Reglinski, Daniel M Passon, Ye Lou, Wolfgang Schliebs, Ralf Erdmann, Matthias Wilmanns. Traffic 2015
22
6

Structural basis for recruitment of the ATPase activator Aha1 to the Hsp90 chaperone machinery.
Philippe Meyer, Chrisostomos Prodromou, Chunyan Liao, Bin Hu, S Mark Roe, Cara K Vaughan, Ignacija Vlasic, Barry Panaretou, Peter W Piper, Laurence H Pearl. EMBO J 2004
122
6

Charged linker sequence modulates eukaryotic heat shock protein 90 (Hsp90) chaperone activity.
Shinji Tsutsumi, Mehdi Mollapour, Chrisostomos Prodromou, Chung-Tien Lee, Barry Panaretou, Soichiro Yoshida, Matthias P Mayer, Leonard M Neckers. Proc Natl Acad Sci U S A 2012
73
6

Features of the Chaperone Cellular Network Revealed through Systematic Interaction Mapping.
Kamran Rizzolo, Jennifer Huen, Ashwani Kumar, Sadhna Phanse, James Vlasblom, Yoshito Kakihara, Hussein A Zeineddine, Zoran Minic, Jamie Snider, Wen Wang,[...]. Cell Rep 2017
30
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.