A citation-based method for searching scientific literature

Elena V Eremeeva, Eugene S Vysotski. Photochem Photobiol 2019
Times Cited: 9







List of co-cited articles
98 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The crystal structure of the photoprotein aequorin at 2.3 A resolution.
J F Head, S Inouye, K Teranishi, O Shimomura. Nature 2000
216
88


Atomic resolution structure of obelin: soaking with calcium enhances electron density of the second oxygen atom substituted at the C2-position of coelenterazine.
Zhi-Jie Liu, Eugene S Vysotski, Lu Deng, John Lee, John Rose, Bi-Cheng Wang. Biochem Biophys Res Commun 2003
46
77


Crystal structure of obelin after Ca2+-triggered bioluminescence suggests neutral coelenteramide as the primary excited state.
Zhi-Jie Liu, Galina A Stepanyuk, Eugene S Vysotski, John Lee, Svetlana V Markova, Natalia P Malikova, Bi-Cheng Wang. Proc Natl Acad Sci U S A 2006
65
66

Regeneration of the photoprotein aequorin.
O Shimomura, F H Johnson. Nature 1975
144
66

Interchange of aequorin and obelin bioluminescence color is determined by substitution of one active site residue of each photoprotein.
Galina A Stepanyuk, Stefan Golz, Svetlana V Markova, Ludmila A Frank, John Lee, Eugene S Vysotski. FEBS Lett 2005
61
66

Mitrocomin from the jellyfish Mitrocoma cellularia with deleted C-terminal tyrosine reveals a higher bioluminescence activity compared to wild type photoprotein.
Ludmila P Burakova, Pavel V Natashin, Svetlana V Markova, Elena V Eremeeva, Natalia P Malikova, Chongyun Cheng, Zhi-Jie Liu, Eugene S Vysotski. J Photochem Photobiol B 2016
15
66

NMR-derived topology of a GFP-photoprotein energy transfer complex.
Maxim S Titushin, Yingang Feng, Galina A Stepanyuk, Yang Li, Svetlana V Markova, Stefan Golz, Bi-Cheng Wang, John Lee, Jinfeng Wang, Eugene S Vysotski,[...]. J Biol Chem 2010
41
66

Oxygen activation of apo-obelin-coelenterazine complex.
Elena V Eremeeva, Pavel V Natashin, Lei Song, Yuguang Zhou, Willem J H van Berkel, Zhi-Jie Liu, Eugene S Vysotski. Chembiochem 2013
24
66



Bioluminescent and spectroscopic properties of His-Trp-Tyr triad mutants of obelin and aequorin.
Elena V Eremeeva, Svetlana V Markova, Ludmila A Frank, Antonie J W G Visser, Willem J H van Berkel, Eugene S Vysotski. Photochem Photobiol Sci 2013
26
55

Subcellular calcium measurements in mammalian cells using jellyfish photoprotein aequorin-based probes.
Massimo Bonora, Carlotta Giorgi, Angela Bononi, Saverio Marchi, Simone Patergnani, Alessandro Rimessi, Rosario Rizzuto, Paolo Pinton. Nat Protoc 2013
115
55

Characterization of hydromedusan Ca(2+)-regulated photoproteins as a tool for measurement of Ca(2+)concentration.
Natalia P Malikova, Ludmila P Burakova, Svetlana V Markova, Eugene S Vysotski. Anal Bioanal Chem 2014
23
55

Cloning and expression of the cDNA coding for aequorin, a bioluminescent calcium-binding protein.
D Prasher, R O McCann, M J Cormier. Biochem Biophys Res Commun 1985
155
55

All three Ca2+-binding loops of photoproteins bind calcium ions: the crystal structures of calcium-loaded apo-aequorin and apo-obelin.
Lu Deng, Eugene S Vysotski, Svetlana V Markova, Zhi-Jie Liu, John Lee, John Rose, Bi-Cheng Wang. Protein Sci 2005
66
55



The crystal structures of semi-synthetic aequorins.
Sachiko Toma, Khoon Tee Chong, Atsushi Nakagawa, Katsunori Teranishi, Satoshi Inouye, Osamu Shimomura. Protein Sci 2005
35
44

Bioluminescence in the sea.
Steven H D Haddock, Mark A Moline, James F Case. Ann Rev Mar Sci 2010
291
44

Cloning and sequence analysis of cDNA for the luminescent protein aequorin.
S Inouye, M Noguchi, Y Sakaki, Y Takagi, T Miyata, S Iwanaga, T Miyata, F I Tsuji. Proc Natl Acad Sci U S A 1985
277
44

The light-sensitive photoprotein berovin from the bioluminescent ctenophore Beroe abyssicola: a novel type of Ca(2+) -regulated photoprotein.
Svetlana V Markova, Ludmila P Burakova, Stefan Golz, Natalia P Malikova, Ludmila A Frank, Eugene S Vysotski. FEBS J 2012
39
44

Coelenterazine-dependent luciferases.
S V Markova, E S Vysotski. Biochemistry (Mosc) 2015
31
44

Structure of the light-emitting moiety of aequorin.
O Shimomura, F H Johnson. Biochemistry 1972
77
44

Role of certain amino acid residues of the coelenterazine-binding cavity in bioluminescence of light-sensitive Ca(2+)-regulated photoprotein berovin.
Ludmila P Burakova, Galina A Stepanyuk, Elena V Eremeeva, Eugene S Vysotski. Photochem Photobiol Sci 2016
10
33




Green-fluorescent protein from the bioluminescent jellyfish Clytia gregaria: cDNA cloning, expression, and characterization of novel recombinant protein.
Svetlana V Markova, Ludmila P Burakova, Ludmila A Frank, Stefan Golz, Kseniya A Korostileva, Eugene S Vysotski. Photochem Photobiol Sci 2010
32
33




Crystal structure of a Ca2+-discharged photoprotein: implications for mechanisms of the calcium trigger and bioluminescence.
Lu Deng, Svetlana V Markova, Eugene S Vysotski, Zhi-Jie Liu, John Lee, John Rose, Bi-Cheng Wang. J Biol Chem 2004
40
33

Recombinant obelin: cloning and expression of cDNA purification, and characterization as a calcium indicator.
B A Illarionov, L A Frank, V A Illarionova, V S Bondar, E S Vysotski, J R Blinks. Methods Enzymol 2000
68
33


Cloning, expression and sequence analysis of cDNA for the Ca(2+)-binding photoprotein, mitrocomin.
T F Fagan, Y Ohmiya, J R Blinks, S Inouye, F I Tsuji. FEBS Lett 1993
49
33

Role of key residues of obelin in coelenterazine binding and conversion into 2-hydroperoxy adduct.
Elena V Eremeeva, Svetlana V Markova, Willem J H van Berkel, Eugene S Vysotski. J Photochem Photobiol B 2013
23
33

Unanimous Model for Describing the Fast Bioluminescence Kinetics of Ca2+ -regulated Photoproteins of Different Organisms.
Elena V Eremeeva, Sergey I Bartsev, Willem J H van Berkel, Eugene S Vysotski. Photochem Photobiol 2017
7
42

Structures of the Ca2+-regulated photoprotein obelin Y138F mutant before and after bioluminescence support the catalytic function of a water molecule in the reaction.
Pavel V Natashin, Wei Ding, Elena V Eremeeva, Svetlana V Markova, John Lee, Eugene S Vysotski, Zhi-Jie Liu. Acta Crystallogr D Biol Crystallogr 2014
22
33

Calcium transients in single muscle fibers.
E B Ridgway, C C Ashley. Biochem Biophys Res Commun 1967
192
33

Lighting up bioluminescence with coelenterazine: strategies and applications.
Tianyu Jiang, Lupei Du, Minyong Li. Photochem Photobiol Sci 2016
38
33

Semisynthetic photoprotein reporters for tracking fast Ca(2+) transients.
Natalia P Malikova, Aren J Borgdorff, Eugene S Vysotski. Photochem Photobiol Sci 2015
14
33

Measurements of Ca²⁺ concentration with recombinant targeted luminescent probes.
Denis Ottolini, Tito Calì, Marisa Brini. Methods Mol Biol 2013
14
33

Recombinant Ca2+-regulated photoproteins of ctenophores: current knowledge and application prospects.
Lyudmila P Burakova, Eugene S Vysotski. Appl Microbiol Biotechnol 2019
5
60


Spectral tuning of obelin bioluminescence by mutations of Trp92.
Natalia P Malikova, Galina A Stepanyuk, Ludmila A Frank, Svetlana V Markova, Eugene S Vysotski, John Lee. FEBS Lett 2003
33
22

Hybrid QM/MM simulations of the obelin bioluminescence and fluorescence reveal an unexpected light emitter.
Shufeng Chen, Isabelle Navizet, Roland Lindh, Yajun Liu, Nicolas Ferré. J Phys Chem B 2014
22
22

Fluorescent Protein-photoprotein Fusions and Their Applications in Calcium Imaging.
Adil Bakayan, Beatriz Domingo, Cecilia F Vaquero, Nadine Peyriéras, Juan Llopis. Photochem Photobiol 2017
11
22

Picosecond fluorescence relaxation spectroscopy of the calcium-discharged photoproteins aequorin and obelin.
Bart van Oort, Elena V Eremeeva, Rob B M Koehorst, Sergey P Laptenok, Herbert van Amerongen, Willem J H van Berkel, Natalia P Malikova, Svetlana V Markova, Eugene S Vysotski, Antonie J W G Visser,[...]. Biochemistry 2009
23
22


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.