A citation-based method for searching scientific literature

Xiu-Tang Cheng, Yu-Xiang Xie, Bing Zhou, Ning Huang, Tamar Farfel-Becker, Zu-Hang Sheng. Autophagy 2018
Times Cited: 23







List of co-cited articles
140 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Signals from the lysosome: a control centre for cellular clearance and energy metabolism.
Carmine Settembre, Alessandro Fraldi, Diego L Medina, Andrea Ballabio. Nat Rev Mol Cell Biol 2013
831
21

Endosome maturation.
Jatta Huotari, Ari Helenius. EMBO J 2011
13

Characterization of LAMP1-labeled nondegradative lysosomal and endocytic compartments in neurons.
Xiu-Tang Cheng, Yu-Xiang Xie, Bing Zhou, Ning Huang, Tamar Farfel-Becker, Zu-Hang Sheng. J Cell Biol 2018
85
13

Autophagy-based unconventional secretory pathway for extracellular delivery of IL-1β.
Nicolas Dupont, Shanya Jiang, Manohar Pilli, Wojciech Ornatowski, Dhruva Bhattacharya, Vojo Deretic. EMBO J 2011
546
13

Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition).
Daniel J Klionsky, Kotb Abdelmohsen, Akihisa Abe, Md Joynal Abedin, Hagai Abeliovich, Abraham Acevedo Arozena, Hiroaki Adachi, Christopher M Adams, Peter D Adams, Khosrow Adeli,[...]. Autophagy 2016
13


Methods in mammalian autophagy research.
Noboru Mizushima, Tamotsu Yoshimori, Beth Levine. Cell 2010
13


Autophagy in immunity and inflammation.
Beth Levine, Noboru Mizushima, Herbert W Virgin. Nature 2011
13

Termination of autophagy and reformation of lysosomes regulated by mTOR.
Li Yu, Christina K McPhee, Lixin Zheng, Gonzalo A Mardones, Yueguang Rong, Junya Peng, Na Mi, Ying Zhao, Zhihua Liu, Fengyi Wan,[...]. Nature 2010
919
13

Autophagy regulates lipid metabolism.
Rajat Singh, Susmita Kaushik, Yongjun Wang, Youqing Xiang, Inna Novak, Masaaki Komatsu, Keiji Tanaka, Ana Maria Cuervo, Mark J Czaja. Nature 2009
13

Translocation of interleukin-1β into a vesicle intermediate in autophagy-mediated secretion.
Min Zhang, Samuel J Kenny, Liang Ge, Ke Xu, Randy Schekman. Elife 2015
179
8

Biogenesis of a novel compartment for autophagosome-mediated unconventional protein secretion.
Caroline Bruns, J Michael McCaffery, Amy J Curwin, Juan M Duran, Vivek Malhotra. J Cell Biol 2011
118
8

Specific autophagy and ESCRT components participate in the unconventional secretion of CFTR.
Shin Hye Noh, Heon Yung Gee, Yonjung Kim, He Piao, Jiyoon Kim, Chung Min Kang, Gahyung Lee, Inhee Mook-Jung, Yangsin Lee, Jin Won Cho,[...]. Autophagy 2018
21
9

Endosome maturation, transport and functions.
Cameron C Scott, Fabrizio Vacca, Jean Gruenberg. Semin Cell Dev Biol 2014
213
8

Microautophagy of cytosolic proteins by late endosomes.
Ranjit Sahu, Susmita Kaushik, Cristina C Clement, Elvira S Cannizzo, Brian Scharf, Antonia Follenzi, Ilaria Potolicchio, Edward Nieves, Ana Maria Cuervo, Laura Santambrogio. Dev Cell 2011
482
8

Rescue of ΔF508-CFTR trafficking via a GRASP-dependent unconventional secretion pathway.
Heon Yung Gee, Shin Hye Noh, Bor Luen Tang, Kyung Hwan Kim, Min Goo Lee. Cell 2011
199
8

Unconventional secretion of Acb1 is mediated by autophagosomes.
Juan M Duran, Christophe Anjard, Chris Stefan, William F Loomis, Vivek Malhotra. J Cell Biol 2010
280
8

Impaired degradation of mutant alpha-synuclein by chaperone-mediated autophagy.
Ana Maria Cuervo, Leonidas Stefanis, Ross Fredenburg, Peter T Lansbury, David Sulzer. Science 2004
8

ESCRT-III drives the final stages of CUPS maturation for unconventional protein secretion.
Amy J Curwin, Nathalie Brouwers, Manuel Alonso Y Adell, David Teis, Gabriele Turacchio, Seetharaman Parashuraman, Paolo Ronchi, Vivek Malhotra. Elife 2016
36
8


Chaperone-mediated autophagy: a unique way to enter the lysosome world.
Susmita Kaushik, Ana Maria Cuervo. Trends Cell Biol 2012
480
8

Autophagy blockade and lysosomal membrane permeabilization contribute to lead-induced nephrotoxicity in primary rat proximal tubular cells.
Xiang-Bin Song, Gang Liu, Fei Liu, Zhen-Gui Yan, Zhen-Yong Wang, Zong-Ping Liu, Lin Wang. Cell Death Dis 2017
80
8

Combination of ERK and autophagy inhibition as a treatment approach for pancreatic cancer.
Kirsten L Bryant, Clint A Stalnecker, Daniel Zeitouni, Jennifer E Klomp, Sen Peng, Andrey P Tikunov, Venugopal Gunda, Mariaelena Pierobon, Andrew M Waters, Samuel D George,[...]. Nat Med 2019
216
8

Discovery of Atg5/Atg7-independent alternative macroautophagy.
Yuya Nishida, Satoko Arakawa, Kenji Fujitani, Hirofumi Yamaguchi, Takeshi Mizuta, Toku Kanaseki, Masaaki Komatsu, Kinya Otsu, Yoshihide Tsujimoto, Shigeomi Shimizu. Nature 2009
749
8

LAMP-2: a control step for phagosome and autophagosome maturation.
Paul Saftig, Wouter Beertsen, Eeva-Liisa Eskelinen. Autophagy 2008
130
8

Mammalian Autophagy: How Does It Work?
Carla F Bento, Maurizio Renna, Ghita Ghislat, Claudia Puri, Avraham Ashkenazi, Mariella Vicinanza, Fiona M Menzies, David C Rubinsztein. Annu Rev Biochem 2016
358
8

Elaiophylin, a novel autophagy inhibitor, exerts antitumor activity as a single agent in ovarian cancer cells.
Xuejiao Zhao, Yong Fang, Yang Yang, Yu Qin, Peng Wu, Ting Wang, Huiling Lai, Li Meng, Daowen Wang, Zhihui Zheng,[...]. Autophagy 2015
61
8



Chloroquine in cancer therapy: a double-edged sword of autophagy.
Tomonori Kimura, Yoshitsugu Takabatake, Atsushi Takahashi, Yoshitaka Isaka. Cancer Res 2013
308
8


Molecular mechanisms of cell death: recommendations of the Nomenclature Committee on Cell Death 2018.
Lorenzo Galluzzi, Ilio Vitale, Stuart A Aaronson, John M Abrams, Dieter Adam, Patrizia Agostinis, Emad S Alnemri, Lucia Altucci, Ivano Amelio, David W Andrews,[...]. Cell Death Differ 2018
8

Lysosomal membrane permeabilization and cell death.
Fengjuan Wang, Raquel Gómez-Sintes, Patricia Boya. Traffic 2018
142
8


Mitochondrial DNA that escapes from autophagy causes inflammation and heart failure.
Takafumi Oka, Shungo Hikoso, Osamu Yamaguchi, Manabu Taneike, Toshihiro Takeda, Takahito Tamai, Jota Oyabu, Tomokazu Murakawa, Hiroyuki Nakayama, Kazuhiko Nishida,[...]. Nature 2012
645
8

The protective role of autophagy in nephrotoxicity induced by bismuth nanoparticles through AMPK/mTOR pathway.
Yongming Liu, Huan Yu, Xihui Zhang, Yong Wang, Zhentao Song, Jian Zhao, Haibin Shi, Ruibin Li, Yangyun Wang, Leshuai W Zhang. Nanotoxicology 2018
24
8

Silica nanoparticles induce autophagosome accumulation via activation of the EIF2AK3 and ATF6 UPR pathways in hepatocytes.
Ji Wang, Yang Li, Junchao Duan, Man Yang, Yang Yu, Lin Feng, Xiaozhe Yang, Xianqing Zhou, Zhendong Zhao, Zhiwei Sun. Autophagy 2018
30
8

Gold nanoparticles induce autophagosome accumulation through size-dependent nanoparticle uptake and lysosome impairment.
Xiaowei Ma, Yanyang Wu, Shubin Jin, Yuan Tian, Xiaoning Zhang, Yuliang Zhao, Li Yu, Xing-Jie Liang. ACS Nano 2011
331
8

p62/SQSTM1 forms protein aggregates degraded by autophagy and has a protective effect on huntingtin-induced cell death.
Geir Bjørkøy, Trond Lamark, Andreas Brech, Heidi Outzen, Maria Perander, Aud Overvatn, Harald Stenmark, Terje Johansen. J Cell Biol 2005
8

Carbon nanotubes, but not spherical nanoparticles, block autophagy by a shape-related targeting of lysosomes in murine macrophages.
Vanessa Cohignac, Marion Julie Landry, Audrey Ridoux, Mathieu Pinault, Balasubramanyam Annangi, Adèle Gerdil, Nathalie Herlin-Boime, Martine Mayne, Masatake Haruta, Patrice Codogno,[...]. Autophagy 2018
22
9

Autophagy balances inflammation in innate immunity.
Vojo Deretic, Beth Levine. Autophagy 2018
189
8

ULK1 induces autophagy by phosphorylating Beclin-1 and activating VPS34 lipid kinase.
Ryan C Russell, Ye Tian, Haixin Yuan, Hyun Woo Park, Yu-Yun Chang, Joungmok Kim, Haerin Kim, Thomas P Neufeld, Andrew Dillin, Kun-Liang Guan. Nat Cell Biol 2013
864
8

Deacetylation of FoxO by Sirt1 Plays an Essential Role in Mediating Starvation-Induced Autophagy in Cardiac Myocytes.
Nirmala Hariharan, Yasuhiro Maejima, Jun Nakae, Jihye Paik, Ronald A Depinho, Junichi Sadoshima. Circ Res 2010
432
8


Extensive involvement of autophagy in Alzheimer disease: an immuno-electron microscopy study.
Ralph A Nixon, Jerzy Wegiel, Asok Kumar, Wai Haung Yu, Corrinne Peterhoff, Anne Cataldo, Ana Maria Cuervo. J Neuropathol Exp Neurol 2005
972
8

A yeast MAPK cascade regulates pexophagy but not other autophagy pathways.
Ravi Manjithaya, Shveta Jain, Jean-Claude Farré, Suresh Subramani. J Cell Biol 2010
50
8

Principles and Properties of Stress Granules.
David S W Protter, Roy Parker. Trends Cell Biol 2016
545
8

Ubc8p functions in catabolite degradation of fructose-1, 6-bisphosphatase in yeast.
T Schüle, M Rose, K D Entian, M Thumm, D H Wolf. EMBO J 2000
61
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.