A citation-based method for searching scientific literature

Ashish Dhir, Somdutta Dhir, Lukasz S Borowski, Laura Jimenez, Michael Teitell, Agnès Rötig, Yanick J Crow, Gillian I Rice, Darragh Duffy, Christelle Tamby, Takayuki Nojima, Arnold Munnich, Manuel Schiff, Claudia Ribeiro de Almeida, Jan Rehwinkel, Andrzej Dziembowski, Roman J Szczesny, Nicholas J Proudfoot. Nature 2018
Times Cited: 178







List of co-cited articles
1330 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Mitochondrial DNA stress primes the antiviral innate immune response.
A Phillip West, William Khoury-Hanold, Matthew Staron, Michal C Tal, Cristiana M Pineda, Sabine M Lang, Megan Bestwick, Brett A Duguay, Nuno Raimundo, Donna A MacDuff,[...]. Nature 2015
709
33

Parkin and PINK1 mitigate STING-induced inflammation.
Danielle A Sliter, Jennifer Martinez, Ling Hao, Xi Chen, Nuo Sun, Tara D Fischer, Jonathon L Burman, Yan Li, Zhe Zhang, Derek P Narendra,[...]. Nature 2018
420
19

BAK/BAX macropores facilitate mitochondrial herniation and mtDNA efflux during apoptosis.
Kate McArthur, Lachlan W Whitehead, John M Heddleston, Lucy Li, Benjamin S Padman, Viola Oorschot, Niall D Geoghegan, Stephane Chappaz, Sophia Davidson, Hui San Chin,[...]. Science 2018
256
19

Breaching Self-Tolerance to Alu Duplex RNA Underlies MDA5-Mediated Inflammation.
Sadeem Ahmad, Xin Mu, Fei Yang, Emily Greenwald, Ji Woo Park, Etai Jacob, Cheng-Zhong Zhang, Sun Hur. Cell 2018
162
19

Apoptotic caspases suppress mtDNA-induced STING-mediated type I IFN production.
Michael J White, Kate McArthur, Donald Metcalf, Rachael M Lane, John C Cambier, Marco J Herold, Mark F van Delft, Sammy Bedoui, Guillaume Lessene, Matthew E Ritchie,[...]. Cell 2014
421
18

Mitochondrial DNA in innate immune responses and inflammatory pathology.
A Phillip West, Gerald S Shadel. Nat Rev Immunol 2017
334
18

Apoptotic caspases prevent the induction of type I interferons by mitochondrial DNA.
Anthony Rongvaux, Ruaidhrí Jackson, Christian C D Harman, Tuo Li, A Phillip West, Marcel R de Zoete, Youtong Wu, Brian Yordy, Saquib A Lakhani, Chia-Yi Kuan,[...]. Cell 2014
383
17

New mitochondrial DNA synthesis enables NLRP3 inflammasome activation.
Zhenyu Zhong, Shuang Liang, Elsa Sanchez-Lopez, Feng He, Shabnam Shalapour, Xue-Jia Lin, Jerry Wong, Siyuan Ding, Ekihiro Seki, Bernd Schnabl,[...]. Nature 2018
314
16

Human ADAR1 Prevents Endogenous RNA from Triggering Translational Shutdown.
Hachung Chung, Jorg J A Calis, Xianfang Wu, Tony Sun, Yingpu Yu, Stephanie L Sarbanes, Viet Loan Dao Thi, Abigail R Shilvock, H-Heinrich Hoffmann, Brad R Rosenberg,[...]. Cell 2018
187
16

Human mitochondrial RNA decay mediated by PNPase-hSuv3 complex takes place in distinct foci.
Lukasz S Borowski, Andrzej Dziembowski, Monika S Hejnowicz, Piotr P Stepien, Roman J Szczesny. Nucleic Acids Res 2013
109
16

PKR Senses Nuclear and Mitochondrial Signals by Interacting with Endogenous Double-Stranded RNAs.
Yoosik Kim, Joha Park, Sujin Kim, MinA Kim, Myeong-Gyun Kang, Chulhwan Kwak, Minjeong Kang, Baekgyu Kim, Hyun-Woo Rhee, V Narry Kim. Mol Cell 2018
54
29

VDAC oligomers form mitochondrial pores to release mtDNA fragments and promote lupus-like disease.
Jeonghan Kim, Rajeev Gupta, Luz P Blanco, Shutong Yang, Anna Shteinfer-Kuzmine, Kening Wang, Jun Zhu, Hee Eun Yoon, Xinghao Wang, Martijn Kerkhofs,[...]. Science 2019
106
15

RNA editing by ADAR1 prevents MDA5 sensing of endogenous dsRNA as nonself.
Brian J Liddicoat, Robert Piskol, Alistair M Chalk, Gokul Ramaswami, Miyoko Higuchi, Jochen C Hartner, Jin Billy Li, Peter H Seeburg, Carl R Walkley. Science 2015
366
14

Inhibiting DNA Methylation Causes an Interferon Response in Cancer via dsRNA Including Endogenous Retroviruses.
Katherine B Chiappinelli, Pamela L Strissel, Alexis Desrichard, Huili Li, Christine Henke, Benjamin Akman, Alexander Hein, Neal S Rote, Leslie M Cope, Alexandra Snyder,[...]. Cell 2015
745
14

DNA-Demethylating Agents Target Colorectal Cancer Cells by Inducing Viral Mimicry by Endogenous Transcripts.
David Roulois, Helen Loo Yau, Rajat Singhania, Yadong Wang, Arnavaz Danesh, Shu Yi Shen, Han Han, Gangning Liang, Peter A Jones, Trevor J Pugh,[...]. Cell 2015
600
14

Length-dependent recognition of double-stranded ribonucleic acids by retinoic acid-inducible gene-I and melanoma differentiation-associated gene 5.
Hiroki Kato, Osamu Takeuchi, Eriko Mikamo-Satoh, Reiko Hirai, Tomoji Kawai, Kazufumi Matsushita, Akane Hiiragi, Terence S Dermody, Takashi Fujita, Shizuo Akira. J Exp Med 2008
14

Mutations in ADAR1 cause Aicardi-Goutières syndrome associated with a type I interferon signature.
Gillian I Rice, Paul R Kasher, Gabriella M A Forte, Niamh M Mannion, Sam M Greenwood, Marcin Szynkiewicz, Jonathan E Dickerson, Sanjeev S Bhaskar, Massimiliano Zampini, Tracy A Briggs,[...]. Nat Genet 2012
460
13

Exosome RNA Unshielding Couples Stromal Activation to Pattern Recognition Receptor Signaling in Cancer.
Barzin Y Nabet, Yu Qiu, Jacob E Shabason, Tony J Wu, Taewon Yoon, Brian C Kim, Joseph L Benci, Angela M DeMichele, Julia Tchou, Joseph Marcotrigiano,[...]. Cell 2017
210
11

cGAS surveillance of micronuclei links genome instability to innate immunity.
Karen J Mackenzie, Paula Carroll, Carol-Anne Martin, Olga Murina, Adeline Fluteau, Daniel J Simpson, Nelly Olova, Hannah Sutcliffe, Jacqueline K Rainger, Andrea Leitch,[...]. Nature 2017
569
11


Mitochondrial DNA in inflammation and immunity.
Joel S Riley, Stephen Wg Tait. EMBO Rep 2020
108
11

Nuclear sensing of breaks in mitochondrial DNA enhances immune surveillance.
Marco Tigano, Danielle C Vargas, Samuel Tremblay-Belzile, Yi Fu, Agnel Sfeir. Nature 2021
32
34

Structural basis for dsRNA recognition, filament formation, and antiviral signal activation by MDA5.
Bin Wu, Alys Peisley, Claire Richards, Hui Yao, Xiaohui Zeng, Cecilie Lin, Feixia Chu, Thomas Walz, Sun Hur. Cell 2013
317
10

Recognition of 5' triphosphate by RIG-I helicase requires short blunt double-stranded RNA as contained in panhandle of negative-strand virus.
Martin Schlee, Andreas Roth, Veit Hornung, Cristina Amparo Hagmann, Vera Wimmenauer, Winfried Barchet, Christoph Coch, Markus Janke, Aleksandra Mihailovic, Greg Wardle,[...]. Immunity 2009
509
10

MAVS forms functional prion-like aggregates to activate and propagate antiviral innate immune response.
Fajian Hou, Lijun Sun, Hui Zheng, Brian Skaug, Qiu-Xing Jiang, Zhijian J Chen. Cell 2011
750
10

A role for mitochondria in NLRP3 inflammasome activation.
Rongbin Zhou, Amir S Yazdi, Philippe Menu, Jürg Tschopp. Nature 2011
10


RIG-I-like receptors: their regulation and roles in RNA sensing.
Jan Rehwinkel, Michaela U Gack. Nat Rev Immunol 2020
185
10

Mitochondrial inner membrane permeabilisation enables mtDNA release during apoptosis.
Joel S Riley, Giovanni Quarato, Catherine Cloix, Jonathan Lopez, Jim O'Prey, Matthew Pearson, James Chapman, Hiromi Sesaki, Leo M Carlin, João F Passos,[...]. EMBO J 2018
124
9

RIG-I like receptor sensing of host RNAs facilitates the cell-intrinsic immune response to KSHV infection.
Yang Zhao, Xiang Ye, William Dunker, Yu Song, John Karijolich. Nat Commun 2018
62
14

Aicardi-Goutières syndrome and the type I interferonopathies.
Yanick J Crow, Nicolas Manel. Nat Rev Immunol 2015
441
9

RIG-I-mediated antiviral responses to single-stranded RNA bearing 5'-phosphates.
Andreas Pichlmair, Oliver Schulz, Choon Ping Tan, Tanja I Näslund, Peter Liljeström, Friedemann Weber, Caetano Reis e Sousa. Science 2006
9

5'-Triphosphate RNA is the ligand for RIG-I.
Veit Hornung, Jana Ellegast, Sarah Kim, Krzysztof Brzózka, Andreas Jung, Hiroki Kato, Hendrik Poeck, Shizuo Akira, Karl-Klaus Conzelmann, Martin Schlee,[...]. Science 2006
9

The RNA helicase RIG-I has an essential function in double-stranded RNA-induced innate antiviral responses.
Mitsutoshi Yoneyama, Mika Kikuchi, Takashi Natsukawa, Noriaki Shinobu, Tadaatsu Imaizumi, Makoto Miyagishi, Kazunari Taira, Shizuo Akira, Takashi Fujita. Nat Immunol 2004
9

Cyclic GMP-AMP synthase is a cytosolic DNA sensor that activates the type I interferon pathway.
Lijun Sun, Jiaxi Wu, Fenghe Du, Xiang Chen, Zhijian J Chen. Science 2013
9

The human mitochondrial transcriptome.
Tim R Mercer, Shane Neph, Marcel E Dinger, Joanna Crawford, Martin A Smith, Anne-Marie J Shearwood, Eric Haugen, Cameron P Bracken, Oliver Rackham, John A Stamatoyannopoulos,[...]. Cell 2011
465
9

Double-stranded RNA is produced by positive-strand RNA viruses and DNA viruses but not in detectable amounts by negative-strand RNA viruses.
Friedemann Weber, Valentina Wagner, Simon B Rasmussen, Rune Hartmann, Søren R Paludan. J Virol 2006
612
9

Sequence and organization of the human mitochondrial genome.
S Anderson, A T Bankier, B G Barrell, M H de Bruijn, A R Coulson, J Drouin, I C Eperon, D P Nierlich, B A Roe, F Sanger,[...]. Nature 1981
9

Mitochondrial DNA that escapes from autophagy causes inflammation and heart failure.
Takafumi Oka, Shungo Hikoso, Osamu Yamaguchi, Manabu Taneike, Toshihiro Takeda, Takahito Tamai, Jota Oyabu, Tomokazu Murakawa, Hiroyuki Nakayama, Kazuhiko Nishida,[...]. Nature 2012
663
9


Ubiquitin-induced oligomerization of the RNA sensors RIG-I and MDA5 activates antiviral innate immune response.
Xiaomo Jiang, Lisa N Kinch, Chad A Brautigam, Xiang Chen, Fenghe Du, Nick V Grishin, Zhijian J Chen. Immunity 2012
270
8

Gain-of-function mutations in IFIH1 cause a spectrum of human disease phenotypes associated with upregulated type I interferon signaling.
Gillian I Rice, Yoandris Del Toro Duany, Emma M Jenkinson, Gabriella Ma Forte, Beverley H Anderson, Giada Ariaudo, Brigitte Bader-Meunier, Eileen M Baildam, Roberta Battini, Michael W Beresford,[...]. Nat Genet 2014
337
8

Differential roles of MDA5 and RIG-I helicases in the recognition of RNA viruses.
Hiroki Kato, Osamu Takeuchi, Shintaro Sato, Mitsutoshi Yoneyama, Masahiro Yamamoto, Kosuke Matsui, Satoshi Uematsu, Andreas Jung, Taro Kawai, Ken J Ishii,[...]. Nature 2006
8

Structural basis for ubiquitin-mediated antiviral signal activation by RIG-I.
Alys Peisley, Bin Wu, Hui Xu, Zhijian J Chen, Sun Hur. Nature 2014
212
8

Loss of ADAR1 in tumours overcomes resistance to immune checkpoint blockade.
Jeffrey J Ishizuka, Robert T Manguso, Collins K Cheruiyot, Kevin Bi, Arpit Panda, Arvin Iracheta-Vellve, Brian C Miller, Peter P Du, Kathleen B Yates, Juan Dubrot,[...]. Nature 2019
196
8

Dengue virus NS2B protein targets cGAS for degradation and prevents mitochondrial DNA sensing during infection.
Sebastian Aguirre, Priya Luthra, Maria T Sanchez-Aparicio, Ana M Maestre, Jenish Patel, Francise Lamothe, Anthony C Fredericks, Shashank Tripathi, Tongtong Zhu, Jessica Pintado-Silva,[...]. Nat Microbiol 2017
165
8

Self-Awareness: Nucleic Acid-Driven Inflammation and the Type I Interferonopathies.
Carolina Uggenti, Alice Lepelley, Yanick J Crow. Annu Rev Immunol 2019
61
13

Trex1 prevents cell-intrinsic initiation of autoimmunity.
Daniel B Stetson, Joan S Ko, Thierry Heidmann, Ruslan Medzhitov. Cell 2008
814
8

Oxidized mitochondrial DNA activates the NLRP3 inflammasome during apoptosis.
Kenichi Shimada, Timothy R Crother, Justin Karlin, Jargalsaikhan Dagvadorj, Norika Chiba, Shuang Chen, V Krishnan Ramanujan, Andrea J Wolf, Laurent Vergnes, David M Ojcius,[...]. Immunity 2012
8

Maintenance and Expression of Mammalian Mitochondrial DNA.
Claes M Gustafsson, Maria Falkenberg, Nils-Göran Larsson. Annu Rev Biochem 2016
266
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.