A citation-based method for searching scientific literature

Alexander Mathis, Pranav Mamidanna, Kevin M Cury, Taiga Abe, Venkatesh N Murthy, Mackenzie Weygandt Mathis, Matthias Bethge. Nat Neurosci 2018
Times Cited: 412







List of co-cited articles
406 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Using DeepLabCut for 3D markerless pose estimation across species and behaviors.
Tanmay Nath, Alexander Mathis, An Chi Chen, Amir Patel, Matthias Bethge, Mackenzie Weygandt Mathis. Nat Protoc 2019
135
30

Mapping Sub-Second Structure in Mouse Behavior.
Alexander B Wiltschko, Matthew J Johnson, Giuliano Iurilli, Ralph E Peterson, Jesse M Katon, Stan L Pashkovski, Victoria E Abraira, Ryan P Adams, Sandeep Robert Datta. Neuron 2015
185
14

Fast animal pose estimation using deep neural networks.
Talmo D Pereira, Diego E Aldarondo, Lindsay Willmore, Mikhail Kislin, Samuel S-H Wang, Mala Murthy, Joshua W Shaevitz. Nat Methods 2019
98
14

DeepPoseKit, a software toolkit for fast and robust animal pose estimation using deep learning.
Jacob M Graving, Daniel Chae, Hemal Naik, Liang Li, Benjamin Koger, Blair R Costelloe, Iain D Couzin. Elife 2019
65
18

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
11

Spontaneous behaviors drive multidimensional, brainwide activity.
Carsen Stringer, Marius Pachitariu, Nicholas Steinmetz, Charu Bai Reddy, Matteo Carandini, Kenneth D Harris. Science 2019
204
9

Computational Neuroethology: A Call to Action.
Sandeep Robert Datta, David J Anderson, Kristin Branson, Pietro Perona, Andrew Leifer. Neuron 2019
59
13

The Striatum Organizes 3D Behavior via Moment-to-Moment Action Selection.
Jeffrey E Markowitz, Winthrop F Gillis, Celia C Beron, Shay Q Neufeld, Keiramarie Robertson, Neha D Bhagat, Ralph E Peterson, Emalee Peterson, Minsuk Hyun, Scott W Linderman,[...]. Cell 2018
97
7

Mapping the stereotyped behaviour of freely moving fruit flies.
Gordon J Berman, Daniel M Choi, William Bialek, Joshua W Shaevitz. J R Soc Interface 2014
144
7

Automated measurement of mouse social behaviors using depth sensing, video tracking, and machine learning.
Weizhe Hong, Ann Kennedy, Xavier P Burgos-Artizzu, Moriel Zelikowsky, Santiago G Navonne, Pietro Perona, David J Anderson. Proc Natl Acad Sci U S A 2015
94
6

Fully integrated silicon probes for high-density recording of neural activity.
James J Jun, Nicholas A Steinmetz, Joshua H Siegle, Daniel J Denman, Marius Bauza, Brian Barbarits, Albert K Lee, Costas A Anastassiou, Alexandru Andrei, Çağatay Aydın,[...]. Nature 2017
451
6

Neuroscience Needs Behavior: Correcting a Reductionist Bias.
John W Krakauer, Asif A Ghazanfar, Alex Gomez-Marin, Malcolm A MacIver, David Poeppel. Neuron 2017
337
6

A Head-Mounted Camera System Integrates Detailed Behavioral Monitoring with Multichannel Electrophysiology in Freely Moving Mice.
Arne F Meyer, Jasper Poort, John O'Keefe, Maneesh Sahani, Jennifer F Linden. Neuron 2018
38
15

Two Distinct Types of Eye-Head Coupling in Freely Moving Mice.
Arne F Meyer, John O'Keefe, Jasper Poort. Curr Biol 2020
20
30

Facial expressions of emotion states and their neuronal correlates in mice.
Nejc Dolensek, Daniel A Gehrlach, Alexandra S Klein, Nadine Gogolla. Science 2020
40
12

idTracker: tracking individuals in a group by automatic identification of unmarked animals.
Alfonso Pérez-Escudero, Julián Vicente-Page, Robert C Hinz, Sara Arganda, Gonzalo G de Polavieja. Nat Methods 2014
237
5

JAABA: interactive machine learning for automatic annotation of animal behavior.
Mayank Kabra, Alice A Robie, Marta Rivera-Alba, Steven Branson, Kristin Branson. Nat Methods 2013
187
5

Npas1+-Nkx2.1+ Neurons Are an Integral Part of the Cortico-pallido-cortical Loop.
Zachary A Abecassis, Brianna L Berceau, Phyo H Win, Daniela García, Harry S Xenias, Qiaoling Cui, Arin Pamukcu, Suraj Cherian, Vivian M Hernández, Uree Chon,[...]. J Neurosci 2020
22
22

Distinct developmental origins manifest in the specialized encoding of movement by adult neurons of the external globus pallidus.
Paul D Dodson, Joseph T Larvin, James M Duffell, Farid N Garas, Natalie M Doig, Nicoletta Kessaris, Ian C Duguid, Rafal Bogacz, Simon J B Butt, Peter J Magill. Neuron 2015
68
7

Single-trial neural dynamics are dominated by richly varied movements.
Simon Musall, Matthew T Kaufman, Ashley L Juavinett, Steven Gluf, Anne K Churchland. Nat Neurosci 2019
132
5

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
5

Deep learning.
Yann LeCun, Yoshua Bengio, Geoffrey Hinton. Nature 2015
4

Dimensionality and dynamics in the behavior of C. elegans.
Greg J Stephens, Bethany Johnson-Kerner, William Bialek, William S Ryu. PLoS Comput Biol 2008
212
4

Toward a science of computational ethology.
David J Anderson, Pietro Perona. Neuron 2014
142
4

Real-time analysis of the behaviour of groups of mice via a depth-sensing camera and machine learning.
Fabrice de Chaumont, Elodie Ey, Nicolas Torquet, Thibault Lagache, Stéphane Dallongeville, Albane Imbert, Thierry Legou, Anne-Marie Le Sourd, Philippe Faure, Thomas Bourgeron,[...]. Nat Biomed Eng 2019
17
23

DeepFly3D, a deep learning-based approach for 3D limb and appendage tracking in tethered, adult Drosophila.
Semih Günel, Helge Rhodin, Daniel Morales, João Campagnolo, Pavan Ramdya, Pascal Fua. Elife 2019
24
16


Miniaturized integration of a fluorescence microscope.
Kunal K Ghosh, Laurie D Burns, Eric D Cocker, Axel Nimmerjahn, Yaniv Ziv, Abbas El Gamal, Mark J Schnitzer. Nat Methods 2011
432
4

A Suite of Transgenic Driver and Reporter Mouse Lines with Enhanced Brain-Cell-Type Targeting and Functionality.
Tanya L Daigle, Linda Madisen, Travis A Hage, Matthew T Valley, Ulf Knoblich, Rylan S Larsen, Marc M Takeno, Lawrence Huang, Hong Gu, Rachael Larsen,[...]. Cell 2018
160
4


Arkypallidal Cells Send a Stop Signal to Striatum.
Nicolas Mallet, Robert Schmidt, Daniel Leventhal, Fujun Chen, Nada Amer, Thomas Boraud, Joshua D Berke. Neuron 2016
94
4

The functional anatomy of basal ganglia disorders.
R L Albin, A B Young, J B Penney. Trends Neurosci 1989
4

Prototypic and arkypallidal neurons in the dopamine-intact external globus pallidus.
Azzedine Abdi, Nicolas Mallet, Foad Y Mohamed, Andrew Sharott, Paul D Dodson, Kouichi C Nakamura, Sana Suri, Sophie V Avery, Joseph T Larvin, Farid N Garas,[...]. J Neurosci 2015
103
4

Npas1+ Pallidal Neurons Target Striatal Projection Neurons.
Kelly E Glajch, Daniel A Kelver, Daniel J Hegeman, Qiaoling Cui, Harry S Xenias, Elizabeth C Augustine, Vivian M Hernández, Neha Verma, Tina Y Huang, Minmin Luo,[...]. J Neurosci 2016
42
9

Diametric neural ensemble dynamics in parkinsonian and dyskinetic states.
Jones G Parker, Jesse D Marshall, Biafra Ahanonu, Yu-Wei Wu, Tony Hyun Kim, Benjamin F Grewe, Yanping Zhang, Jin Zhong Li, Jun B Ding, Michael D Ehlers,[...]. Nature 2018
89
4

A quantitative framework for whole-body coordination reveals specific deficits in freely walking ataxic mice.
Ana S Machado, Dana M Darmohray, João Fayad, Hugo G Marques, Megan R Carey. Elife 2015
67
5

Vision Drives Accurate Approach Behavior during Prey Capture in Laboratory Mice.
Jennifer L Hoy, Iryna Yavorska, Michael Wehr, Cristopher M Niell. Curr Biol 2016
65
6

Pupil fluctuations track rapid changes in adrenergic and cholinergic activity in cortex.
Jacob Reimer, Matthew J McGinley, Yang Liu, Charles Rodenkirch, Qi Wang, David A McCormick, Andreas S Tolias. Nat Commun 2016
244
4

Movement-Related Signals in Sensory Areas: Roles in Natural Behavior.
Philip R L Parker, Morgan A Brown, Matthew C Smear, Cristopher M Niell. Trends Neurosci 2020
14
28

A shared neural ensemble links distinct contextual memories encoded close in time.
Denise J Cai, Daniel Aharoni, Tristan Shuman, Justin Shobe, Jeremy Biane, Weilin Song, Brandon Wei, Michael Veshkini, Mimi La-Vu, Jerry Lou,[...]. Nature 2016
308
4

Automated image-based tracking and its application in ecology.
Anthony I Dell, John A Bender, Kristin Branson, Iain D Couzin, Gonzalo G de Polavieja, Lucas P J J Noldus, Alfonso Pérez-Escudero, Pietro Perona, Andrew D Straw, Martin Wikelski,[...]. Trends Ecol Evol 2014
131
4

A Fully Automated Approach to Spike Sorting.
Jason E Chung, Jeremy F Magland, Alex H Barnett, Vanessa M Tolosa, Angela C Tooker, Kye Y Lee, Kedar G Shah, Sarah H Felix, Loren M Frank, Leslie F Greengard. Neuron 2017
103
4

Real-Time Selective Markerless Tracking of Forepaws of Head Fixed Mice Using Deep Neural Networks.
Brandon J Forys, Dongsheng Xiao, Pankaj Gupta, Timothy H Murphy. eNeuro 2020
5
80

Rats maintain an overhead binocular field at the expense of constant fusion.
Damian J Wallace, David S Greenberg, Juergen Sawinski, Stefanie Rulla, Giuseppe Notaro, Jason N D Kerr. Nature 2013
146
4

A mesoscale connectome of the mouse brain.
Seung Wook Oh, Julie A Harris, Lydia Ng, Brent Winslow, Nicholas Cain, Stefan Mihalas, Quanxin Wang, Chris Lau, Leonard Kuan, Alex M Henry,[...]. Nature 2014
988
4

Real-time, low-latency closed-loop feedback using markerless posture tracking.
Gary A Kane, Gonçalo Lopes, Jonny L Saunders, Alexander Mathis, Mackenzie W Mathis. Elife 2020
10
40

idtracker.ai: tracking all individuals in small or large collectives of unmarked animals.
Francisco Romero-Ferrero, Mattia G Bergomi, Robert C Hinz, Francisco J H Heras, Gonzalo G de Polavieja. Nat Methods 2019
41
9

A robust and high-throughput Cre reporting and characterization system for the whole mouse brain.
Linda Madisen, Theresa A Zwingman, Susan M Sunkin, Seung Wook Oh, Hatim A Zariwala, Hong Gu, Lydia L Ng, Richard D Palmiter, Michael J Hawrylycz, Allan R Jones,[...]. Nat Neurosci 2010
4

NIH Image to ImageJ: 25 years of image analysis.
Caroline A Schneider, Wayne S Rasband, Kevin W Eliceiri. Nat Methods 2012
3

Experimenter effects on behavioral test scores of eight inbred mouse strains under the influence of ethanol.
Martin Bohlen, Erika R Hayes, Benjamin Bohlen, Jeremy D Bailoo, John C Crabbe, Douglas Wahlsten. Behav Brain Res 2014
41
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.