A citation-based method for searching scientific literature

Ana B Muñoz-Manchado, Carolina Bengtsson Gonzales, Amit Zeisel, Hermany Munguba, Bo Bekkouche, Nathan G Skene, Peter Lönnerberg, Jesper Ryge, Kenneth D Harris, Sten Linnarsson, Jens Hjerling-Leffler. Cell Rep 2018
Times Cited: 88







List of co-cited articles
900 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Molecular Diversity and Specializations among the Cells of the Adult Mouse Brain.
Arpiar Saunders, Evan Z Macosko, Alec Wysoker, Melissa Goldman, Fenna M Krienen, Heather de Rivera, Elizabeth Bien, Matthew Baum, Laura Bortolin, Shuyu Wang,[...]. Cell 2018
542
29

Adult mouse cortical cell taxonomy revealed by single cell transcriptomics.
Bosiljka Tasic, Vilas Menon, Thuc Nghi Nguyen, Tae Kyung Kim, Tim Jarsky, Zizhen Yao, Boaz Levi, Lucas T Gray, Staci A Sorensen, Tim Dolbeare,[...]. Nat Neurosci 2016
800
28

Molecular Architecture of the Mouse Nervous System.
Amit Zeisel, Hannah Hochgerner, Peter Lönnerberg, Anna Johnsson, Fatima Memic, Job van der Zwan, Martin Häring, Emelie Braun, Lars E Borm, Gioele La Manno,[...]. Cell 2018
885
26

Shared and distinct transcriptomic cell types across neocortical areas.
Bosiljka Tasic, Zizhen Yao, Lucas T Graybuck, Kimberly A Smith, Thuc Nghi Nguyen, Darren Bertagnolli, Jeff Goldy, Emma Garren, Michael N Economo, Sarada Viswanathan,[...]. Nature 2018
542
26

Cellular Taxonomy of the Mouse Striatum as Revealed by Single-Cell RNA-Seq.
Ozgun Gokce, Geoffrey M Stanley, Barbara Treutlein, Norma F Neff, J Gray Camp, Robert C Malenka, Patrick E Rothwell, Marc V Fuccillo, Thomas C Südhof, Stephen R Quake. Cell Rep 2016
200
26

Brain structure. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq.
Amit Zeisel, Ana B Muñoz-Manchado, Simone Codeluppi, Peter Lönnerberg, Gioele La Manno, Anna Juréus, Sueli Marques, Hermany Munguba, Liqun He, Christer Betsholtz,[...]. Science 2015
25

Integration of electrophysiological recordings with single-cell RNA-seq data identifies neuronal subtypes.
János Fuzik, Amit Zeisel, Zoltán Máté, Daniela Calvigioni, Yuchio Yanagawa, Gábor Szabó, Sten Linnarsson, Tibor Harkany. Nat Biotechnol 2016
209
18

Developmental diversification of cortical inhibitory interneurons.
Christian Mayer, Christoph Hafemeister, Rachel C Bandler, Robert Machold, Renata Batista Brito, Xavier Jaglin, Kathryn Allaway, Andrew Butler, Gord Fishell, Rahul Satija. Nature 2018
201
18

Electrophysiological, transcriptomic and morphologic profiling of single neurons using Patch-seq.
Cathryn R Cadwell, Athanasia Palasantza, Xiaolong Jiang, Philipp Berens, Qiaolin Deng, Marlene Yilmaz, Jacob Reimer, Shan Shen, Matthias Bethge, Kimberley F Tolias,[...]. Nat Biotechnol 2016
248
17

Heterogeneity and Diversity of Striatal GABAergic Interneurons: Update 2018.
James M Tepper, Tibor Koós, Osvaldo Ibanez-Sandoval, Fatuel Tecuapetla, Thomas W Faust, Maxime Assous. Front Neuroanat 2018
76
19

Classes and continua of hippocampal CA1 inhibitory neurons revealed by single-cell transcriptomics.
Kenneth D Harris, Hannah Hochgerner, Nathan G Skene, Lorenza Magno, Linda Katona, Carolina Bengtsson Gonzales, Peter Somogyi, Nicoletta Kessaris, Sten Linnarsson, Jens Hjerling-Leffler. PLoS Biol 2018
115
17

Integrating single-cell transcriptomic data across different conditions, technologies, and species.
Andrew Butler, Paul Hoffman, Peter Smibert, Efthymia Papalexi, Rahul Satija. Nat Biotechnol 2018
14

Heterogeneity and diversity of striatal GABAergic interneurons.
James M Tepper, Fatuel Tecuapetla, Tibor Koós, Osvaldo Ibáñez-Sandoval. Front Neuroanat 2010
275
14

Continuous and Discrete Neuron Types of the Adult Murine Striatum.
Geoffrey Stanley, Ozgun Gokce, Robert C Malenka, Thomas C Südhof, Stephen R Quake. Neuron 2020
35
37


Modulation of striatal projection systems by dopamine.
Charles R Gerfen, D James Surmeier. Annu Rev Neurosci 2011
924
13

GABAergic circuits mediate the reinforcement-related signals of striatal cholinergic interneurons.
Daniel F English, Osvaldo Ibanez-Sandoval, Eran Stark, Fatuel Tecuapetla, György Buzsáki, Karl Deisseroth, James M Tepper, Tibor Koos. Nat Neurosci 2011
199
13

A comprehensive excitatory input map of the striatum reveals novel functional organization.
Barbara J Hunnicutt, Bart C Jongbloets, William T Birdsong, Katrina J Gertz, Haining Zhong, Tianyi Mao. Elife 2016
187
13

A robust and high-throughput Cre reporting and characterization system for the whole mouse brain.
Linda Madisen, Theresa A Zwingman, Susan M Sunkin, Seung Wook Oh, Hatim A Zariwala, Hong Gu, Lydia L Ng, Richard D Palmiter, Michael J Hawrylycz, Allan R Jones,[...]. Nat Neurosci 2010
12


Distinct roles of GABAergic interneurons in the regulation of striatal output pathways.
Aryn H Gittis, Alexandra B Nelson, Myo T Thwin, Jorge J Palop, Anatol C Kreitzer. J Neurosci 2010
241
12

Differential processing of thalamic information via distinct striatal interneuron circuits.
Maxime Assous, Jaime Kaminer, Fulva Shah, Arpan Garg, Tibor Koós, James M Tepper. Nat Commun 2017
54
20

Early emergence of cortical interneuron diversity in the mouse embryo.
Da Mi, Zhen Li, Lynette Lim, Mingfeng Li, Monika Moissidis, Yifei Yang, Tianliuyun Gao, Tim Xiaoming Hu, Thomas Pratt, David J Price,[...]. Science 2018
114
12

Comprehensive Integration of Single-Cell Data.
Tim Stuart, Andrew Butler, Paul Hoffman, Christoph Hafemeister, Efthymia Papalexi, William M Mauck, Yuhan Hao, Marlon Stoeckius, Peter Smibert, Rahul Satija. Cell 2019
12

Striatal dopamine release is triggered by synchronized activity in cholinergic interneurons.
Sarah Threlfell, Tatjana Lalic, Nicola J Platt, Katie A Jennings, Karl Deisseroth, Stephanie J Cragg. Neuron 2012
459
12

STAR: ultrafast universal RNA-seq aligner.
Alexander Dobin, Carrie A Davis, Felix Schlesinger, Jorg Drenkow, Chris Zaleski, Sonali Jha, Philippe Batut, Mark Chaisson, Thomas R Gingeras. Bioinformatics 2013
11

Transcriptional Architecture of Synaptic Communication Delineates GABAergic Neuron Identity.
Anirban Paul, Megan Crow, Ricardo Raudales, Miao He, Jesse Gillis, Z Josh Huang. Cell 2017
203
11


Striatal Local Circuitry: A New Framework for Lateral Inhibition.
Dennis A Burke, Horacio G Rotstein, Veronica A Alvarez. Neuron 2017
96
11

The mouse cortico-striatal projectome.
Houri Hintiryan, Nicholas N Foster, Ian Bowman, Maxwell Bay, Monica Y Song, Lin Gou, Seita Yamashita, Michael S Bienkowski, Brian Zingg, Muye Zhu,[...]. Nat Neurosci 2016
222
11

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
11

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets.
Evan Z Macosko, Anindita Basu, Rahul Satija, James Nemesh, Karthik Shekhar, Melissa Goldman, Itay Tirosh, Allison R Bialas, Nolan Kamitaki, Emily M Martersteck,[...]. Cell 2015
10

Dynamics of synaptic transmission between fast-spiking interneurons and striatal projection neurons of the direct and indirect pathways.
Henrike Planert, Susanne N Szydlowski, J J Johannes Hjorth, Sten Grillner, Gilad Silberberg. J Neurosci 2010
138
10

Reconstruction and Simulation of Neocortical Microcircuitry.
Henry Markram, Eilif Muller, Srikanth Ramaswamy, Michael W Reimann, Marwan Abdellah, Carlos Aguado Sanchez, Anastasia Ailamaki, Lidia Alonso-Nanclares, Nicolas Antille, Selim Arsever,[...]. Cell 2015
538
10

Cholinergic modulation of striatal microcircuits.
Nilupaer Abudukeyoumu, Teresa Hernandez-Flores, Marianela Garcia-Munoz, Gordon W Arbuthnott. Eur J Neurosci 2019
48
18

Classification of electrophysiological and morphological neuron types in the mouse visual cortex.
Nathan W Gouwens, Staci A Sorensen, Jim Berg, Changkyu Lee, Tim Jarsky, Jonathan Ting, Susan M Sunkin, David Feng, Costas A Anastassiou, Eliza Barkan,[...]. Nat Neurosci 2019
129
10


Single-cell RNAseq reveals cell adhesion molecule profiles in electrophysiologically defined neurons.
Csaba Földy, Spyros Darmanis, Jason Aoto, Robert C Malenka, Stephen R Quake, Thomas C Südhof. Proc Natl Acad Sci U S A 2016
87
9

Parvalbumin Interneurons Modulate Striatal Output and Enhance Performance during Associative Learning.
Kwang Lee, Sandra M Holley, Justin L Shobe, Natalie C Chong, Carlos Cepeda, Michael S Levine, Sotiris C Masmanidis. Neuron 2017
69
11

Differential inputs to striatal cholinergic and parvalbumin interneurons imply functional distinctions.
Jason R Klug, Max D Engelhardt, Cara N Cadman, Hao Li, Jared B Smith, Sarah Ayala, Elora W Williams, Hilary Hoffman, Xin Jin. Elife 2018
42
19

A developmental switch in the response of DRG neurons to ETS transcription factor signaling.
Simon Hippenmeyer, Eline Vrieseling, Markus Sigrist, Thomas Portmann, Celia Laengle, David R Ladle, Silvia Arber. PLoS Biol 2005
691
9

Three groups of interneurons account for nearly 100% of neocortical GABAergic neurons.
Bernardo Rudy, Gordon Fishell, SooHyun Lee, Jens Hjerling-Leffler. Dev Neurobiol 2011
759
9

Hippocampal GABAergic Inhibitory Interneurons.
Kenneth A Pelkey, Ramesh Chittajallu, Michael T Craig, Ludovic Tricoire, Jason C Wester, Chris J McBain. Physiol Rev 2017
308
9

Development and Functional Diversification of Cortical Interneurons.
Lynette Lim, Da Mi, Alfredo Llorca, Oscar Marín. Neuron 2018
218
9



A Spatiomolecular Map of the Striatum.
Antje Märtin, Daniela Calvigioni, Ourania Tzortzi, Janos Fuzik, Emil Wärnberg, Konstantinos Meletis. Cell Rep 2019
36
22

Comprehensive Classification of Retinal Bipolar Neurons by Single-Cell Transcriptomics.
Karthik Shekhar, Sylvain W Lapan, Irene E Whitney, Nicholas M Tran, Evan Z Macosko, Monika Kowalczyk, Xian Adiconis, Joshua Z Levin, James Nemesh, Melissa Goldman,[...]. Cell 2016
527
7

Interneuron cell types are fit to function.
Adam Kepecs, Gordon Fishell. Nature 2014
594
7



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.