A citation-based method for searching scientific literature

Jose Ordovas-Montanes, Daniel F Dwyer, Sarah K Nyquist, Kathleen M Buchheit, Marko Vukovic, Chaarushena Deb, Marc H Wadsworth, Travis K Hughes, Samuel W Kazer, Eri Yoshimoto, Katherine N Cahill, Neil Bhattacharyya, Howard R Katz, Bonnie Berger, Tanya M Laidlaw, Joshua A Boyce, Nora A Barrett, Alex K Shalek. Nature 2018
Times Cited: 169







List of co-cited articles
1338 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Inflammatory memory sensitizes skin epithelial stem cells to tissue damage.
Shruti Naik, Samantha B Larsen, Nicholas C Gomez, Kirill Alaverdyan, Ataman Sendoel, Shaopeng Yuan, Lisa Polak, Anita Kulukian, Sophia Chai, Elaine Fuchs. Nature 2017
235
19

A cellular census of human lungs identifies novel cell states in health and in asthma.
Felipe A Vieira Braga, Gozde Kar, Marijn Berg, Orestes A Carpaij, Krzysztof Polanski, Lukas M Simon, Sharon Brouwer, Tomás Gomes, Laura Hesse, Jian Jiang,[...]. Nat Med 2019
274
18

Efficacy and safety of dupilumab in patients with severe chronic rhinosinusitis with nasal polyps (LIBERTY NP SINUS-24 and LIBERTY NP SINUS-52): results from two multicentre, randomised, double-blind, placebo-controlled, parallel-group phase 3 trials.
Claus Bachert, Joseph K Han, Martin Desrosiers, Peter W Hellings, Nikhil Amin, Stella E Lee, Joaquim Mullol, Leon S Greos, John V Bosso, Tanya M Laidlaw,[...]. Lancet 2019
341
16

A revised airway epithelial hierarchy includes CFTR-expressing ionocytes.
Daniel T Montoro, Adam L Haber, Moshe Biton, Vladimir Vinarsky, Brian Lin, Susan E Birket, Feng Yuan, Sijia Chen, Hui Min Leung, Jorge Villoria,[...]. Nature 2018
437
16

Inflammatory endotypes of chronic rhinosinusitis based on cluster analysis of biomarkers.
Peter Tomassen, Griet Vandeplas, Thibaut Van Zele, Lars-Olaf Cardell, Julia Arebro, Heidi Olze, Ulrike Förster-Ruhrmann, Marek L Kowalski, Agnieszka Olszewska-Ziąber, Gabriele Holtappels,[...]. J Allergy Clin Immunol 2016
455
12

Solitary chemosensory cells are a primary epithelial source of IL-25 in patients with chronic rhinosinusitis with nasal polyps.
Michael A Kohanski, Alan D Workman, Neil N Patel, Li-Yin Hung, Julie P Shtraks, Bei Chen, Mariel Blasetti, Laurel Doghramji, David W Kennedy, Nithin D Adappa,[...]. J Allergy Clin Immunol 2018
83
14

A single-cell atlas of the airway epithelium reveals the CFTR-rich pulmonary ionocyte.
Lindsey W Plasschaert, Rapolas Žilionis, Rayman Choo-Wing, Virginia Savova, Judith Knehr, Guglielmo Roma, Allon M Klein, Aron B Jaffe. Nature 2018
387
12

SARS-CoV-2 Receptor ACE2 Is an Interferon-Stimulated Gene in Human Airway Epithelial Cells and Is Detected in Specific Cell Subsets across Tissues.
Carly G K Ziegler, Samuel J Allon, Sarah K Nyquist, Ian M Mbano, Vincent N Miao, Constantine N Tzouanas, Yuming Cao, Ashraf S Yousif, Julia Bals, Blake M Hauser,[...]. Cell 2020
12

Activation of the 15-lipoxygenase pathway in aspirin-exacerbated respiratory disease.
Whitney W Stevens, Anna G Staudacher, Kathryn E Hulse, Roderick G Carter, Deborah R Winter, Hiam Abdala-Valencia, Atsushi Kato, Lydia Suh, James E Norton, Julia H Huang,[...]. J Allergy Clin Immunol 2021
21
57

Modulation of Myelopoiesis Progenitors Is an Integral Component of Trained Immunity.
Ioannis Mitroulis, Klara Ruppova, Baomei Wang, Lan-Sun Chen, Michal Grzybek, Tatyana Grinenko, Anne Eugster, Maria Troullinaki, Alessandra Palladini, Ioannis Kourtzelis,[...]. Cell 2018
410
11

A loss-of-function variant in ALOX15 protects against nasal polyps and chronic rhinosinusitis.
Ragnar P Kristjansson, Stefania Benonisdottir, Olafur B Davidsson, Asmundur Oddsson, Vinicius Tragante, Jon K Sigurdsson, Lilja Stefansdottir, Stefan Jonsson, Brynjar O Jensson, Joseph G Arthur,[...]. Nat Genet 2019
43
25

Efficacy and safety of omalizumab in nasal polyposis: 2 randomized phase 3 trials.
Philippe Gevaert, Theodore A Omachi, Jonathan Corren, Joaquim Mullol, Joseph Han, Stella E Lee, Derrick Kaufman, Monica Ligueros-Saylan, Monet Howard, Rui Zhu,[...]. J Allergy Clin Immunol 2020
142
11

SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes.
Waradon Sungnak, Ni Huang, Christophe Bécavin, Marijn Berg, Rachel Queen, Monika Litvinukova, Carlos Talavera-López, Henrike Maatz, Daniel Reichart, Fotios Sampaziotis,[...]. Nat Med 2020
11


Differentiation of chronic sinus diseases by measurement of inflammatory mediators.
T Van Zele, S Claeys, P Gevaert, G Van Maele, G Holtappels, P Van Cauwenberge, C Bachert. Allergy 2006
545
10

EPOS 2012: European position paper on rhinosinusitis and nasal polyps 2012. A summary for otorhinolaryngologists.
Wytske J Fokkens, Valerie J Lund, Joachim Mullol, Claus Bachert, Isam Alobid, Fuad Baroody, Noam Cohen, Anders Cervin, Richard Douglas, Philippe Gevaert,[...]. Rhinology 2012
10

Basal cells as stem cells of the mouse trachea and human airway epithelium.
Jason R Rock, Mark W Onaitis, Emma L Rawlins, Yun Lu, Cheryl P Clark, Yan Xue, Scott H Randell, Brigid L M Hogan. Proc Natl Acad Sci U S A 2009
884
10

BCG Educates Hematopoietic Stem Cells to Generate Protective Innate Immunity against Tuberculosis.
Eva Kaufmann, Joaquin Sanz, Jonathan L Dunn, Nargis Khan, Laura E Mendonça, Alain Pacis, Fanny Tzelepis, Erwan Pernet, Anne Dumaine, Jean-Christophe Grenier,[...]. Cell 2018
448
10

Epigenetic programming of monocyte-to-macrophage differentiation and trained innate immunity.
Sadia Saeed, Jessica Quintin, Hindrik H D Kerstens, Nagesha A Rao, Ali Aghajanirefah, Filomena Matarese, Shih-Chin Cheng, Jacqueline Ratter, Kim Berentsen, Martijn A van der Ent,[...]. Science 2014
818
10

Associations Between Inflammatory Endotypes and Clinical Presentations in Chronic Rhinosinusitis.
Whitney W Stevens, Anju T Peters, Bruce K Tan, Aiko I Klingler, Julie A Poposki, Kathryn E Hulse, Leslie C Grammer, Kevin C Welch, Stephanie S Smith, David B Conley,[...]. J Allergy Clin Immunol Pract 2019
80
12

Tuft-cell-derived IL-25 regulates an intestinal ILC2-epithelial response circuit.
Jakob von Moltke, Ming Ji, Hong-Erh Liang, Richard M Locksley. Nature 2016
576
9

Novel dynamics of human mucociliary differentiation revealed by single-cell RNA sequencing of nasal epithelial cultures.
Sandra Ruiz García, Marie Deprez, Kevin Lebrigand, Amélie Cavard, Agnès Paquet, Marie-Jeanne Arguel, Virginie Magnone, Marin Truchi, Ignacio Caballero, Sylvie Leroy,[...]. Development 2019
78
11

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.
Aravind Subramanian, Pablo Tamayo, Vamsi K Mootha, Sayan Mukherjee, Benjamin L Ebert, Michael A Gillette, Amanda Paulovich, Scott L Pomeroy, Todd R Golub, Eric S Lander,[...]. Proc Natl Acad Sci U S A 2005
9

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets.
Evan Z Macosko, Anindita Basu, Rahul Satija, James Nemesh, Karthik Shekhar, Melissa Goldman, Itay Tirosh, Allison R Bialas, Nolan Kamitaki, Emily M Martersteck,[...]. Cell 2015
9

Defining trained immunity and its role in health and disease.
Mihai G Netea, Jorge Domínguez-Andrés, Luis B Barreiro, Triantafyllos Chavakis, Maziar Divangahi, Elaine Fuchs, Leo A B Joosten, Jos W M van der Meer, Musa M Mhlanga, Willem J M Mulder,[...]. Nat Rev Immunol 2020
510
9

mTOR- and HIF-1α-mediated aerobic glycolysis as metabolic basis for trained immunity.
Shih-Chin Cheng, Jessica Quintin, Robert A Cramer, Kelly M Shepardson, Sadia Saeed, Vinod Kumar, Evangelos J Giamarellos-Bourboulis, Joost H A Martens, Nagesha Appukudige Rao, Ali Aghajanirefah,[...]. Science 2014
949
9

Imbalanced Host Response to SARS-CoV-2 Drives Development of COVID-19.
Daniel Blanco-Melo, Benjamin E Nilsson-Payant, Wen-Chun Liu, Skyler Uhl, Daisy Hoagland, Rasmus Møller, Tristan X Jordan, Kohei Oishi, Maryline Panis, David Sachs,[...]. Cell 2020
9

Effect of Subcutaneous Dupilumab on Nasal Polyp Burden in Patients With Chronic Sinusitis and Nasal Polyposis: A Randomized Clinical Trial.
Claus Bachert, Leda Mannent, Robert M Naclerio, Joaquim Mullol, Berrylin J Ferguson, Philippe Gevaert, Peter Hellings, Lixia Jiao, Lin Wang, Robert R Evans,[...]. JAMA 2016
410
8

Airway basal stem cells: a perspective on their roles in epithelial homeostasis and remodeling.
Jason R Rock, Scott H Randell, Brigid L M Hogan. Dis Model Mech 2010
421
8

Pulmonary neuroendocrine cells amplify allergic asthma responses.
Pengfei Sui, Darin L Wiesner, Jinhao Xu, Yan Zhang, Jinwoo Lee, Steven Van Dyken, Amber Lashua, Chuyue Yu, Bruce S Klein, Richard M Locksley,[...]. Science 2018
158
8

Reduced need for surgery in severe nasal polyposis with mepolizumab: Randomized trial.
Claus Bachert, Ana R Sousa, Valerie J Lund, Glenis K Scadding, Philippe Gevaert, Shuaib Nasser, Stephen R Durham, Marjolein E Cornet, Harsha H Kariyawasam, Jane Gilbert,[...]. J Allergy Clin Immunol 2017
230
8

Cytokines in Chronic Rhinosinusitis. Role in Eosinophilia and Aspirin-exacerbated Respiratory Disease.
Whitney W Stevens, Christopher J Ocampo, Sergejs Berdnikovs, Masafumi Sakashita, Mahboobeh Mahdavinia, Lydia Suh, Tetsuji Takabayashi, James E Norton, Kathryn E Hulse, David B Conley,[...]. Am J Respir Crit Care Med 2015
155
8

15-Lipoxygenase 1 in nasal polyps promotes CCL26/eotaxin 3 expression through extracellular signal-regulated kinase activation.
Zhipeng Li, Ming Zeng, Yanhan Deng, Jinming Zhao, Xiuxia Zhou, John B Trudeau, Ezequiel Goldschmidt, John A Moore, Hongwei Chu, Weitian Zhang,[...]. J Allergy Clin Immunol 2019
20
40

Integrating single-cell transcriptomic data across different conditions, technologies, and species.
Andrew Butler, Paul Hoffman, Peter Smibert, Efthymia Papalexi, Rahul Satija. Nat Biotechnol 2018
8

Epithelial barriers in allergy and asthma.
Peter W Hellings, Brecht Steelant. J Allergy Clin Immunol 2020
58
13

Different types of T-effector cells orchestrate mucosal inflammation in chronic sinus disease.
Nan Zhang, Thibaut Van Zele, Claudina Perez-Novo, Nicholas Van Bruaene, Gabriele Holtappels, Natalie DeRuyck, Paul Van Cauwenberge, Claus Bachert. J Allergy Clin Immunol 2008
416
8

Diversity of TH cytokine profiles in patients with chronic rhinosinusitis: A multicenter study in Europe, Asia, and Oceania.
Xiangdong Wang, Nan Zhang, Mingyu Bo, Gabriele Holtappels, Ming Zheng, Hongfei Lou, Hong Wang, Luo Zhang, Claus Bachert. J Allergy Clin Immunol 2016
243
8

A Single-Cell Atlas of the Human Healthy Airways.
Marie Deprez, Laure-Emmanuelle Zaragosi, Marin Truchi, Christophe Becavin, Sandra Ruiz García, Marie-Jeanne Arguel, Magali Plaisant, Virginie Magnone, Kevin Lebrigand, Sophie Abelanet,[...]. Am J Respir Crit Care Med 2020
69
11

Dissecting the cellular specificity of smoking effects and reconstructing lineages in the human airway epithelium.
Katherine C Goldfarbmuren, Nathan D Jackson, Satria P Sajuthi, Nathan Dyjack, Katie S Li, Cydney L Rios, Elizabeth G Plender, Michael T Montgomery, Jamie L Everman, Preston E Bratcher,[...]. Nat Commun 2020
47
17

Impaired type I interferon activity and inflammatory responses in severe COVID-19 patients.
Jérôme Hadjadj, Nader Yatim, Laura Barnabei, Aurélien Corneau, Jeremy Boussier, Nikaïa Smith, Hélène Péré, Bruno Charbit, Vincent Bondet, Camille Chenevier-Gobeaux,[...]. Science 2020
8

Comprehensive Integration of Single-Cell Data.
Tim Stuart, Andrew Butler, Paul Hoffman, Christoph Hafemeister, Efthymia Papalexi, William M Mauck, Yuhan Hao, Marlon Stoeckius, Peter Smibert, Rahul Satija. Cell 2019
8

Allergen-Experienced Group 2 Innate Lymphoid Cells Acquire Memory-like Properties and Enhance Allergic Lung Inflammation.
Itziar Martinez-Gonzalez, Laura Mathä, Catherine A Steer, Maryam Ghaedi, Grace F T Poon, Fumio Takei. Immunity 2016
154
8

Innate immune memory in the brain shapes neurological disease hallmarks.
Ann-Christin Wendeln, Karoline Degenhardt, Lalit Kaurani, Michael Gertig, Thomas Ulas, Gaurav Jain, Jessica Wagner, Lisa M Häsler, Katleen Wild, Angelos Skodras,[...]. Nature 2018
362
8

Mepolizumab, a humanized anti-IL-5 mAb, as a treatment option for severe nasal polyposis.
Philippe Gevaert, Nicholas Van Bruaene, Tom Cattaert, Kristel Van Steen, Thibaut Van Zele, Frederic Acke, Natalie De Ruyck, Katrien Blomme, Ana R Sousa, Richard P Marshall,[...]. J Allergy Clin Immunol 2011
373
7

Glandular mast cells with distinct phenotype are highly elevated in chronic rhinosinusitis with nasal polyps.
Tetsuji Takabayashi, Atsushi Kato, Anju T Peters, Lydia A Suh, Roderick Carter, James Norton, Leslie C Grammer, Bruce K Tan, Rakesh K Chandra, David B Conley,[...]. J Allergy Clin Immunol 2012
88
7

Thymic stromal lymphopoietin activity is increased in nasal polyps of patients with chronic rhinosinusitis.
Deepti R Nagarkar, Julie A Poposki, Bruce K Tan, Michael R Comeau, Anju T Peters, Kathryn E Hulse, Lydia A Suh, James Norton, Kathleen E Harris, Leslie C Grammer,[...]. J Allergy Clin Immunol 2013
161
7

Immunopathology of chronic rhinosinusitis.
Atsushi Kato. Allergol Int 2015
138
7

Western Diet Triggers NLRP3-Dependent Innate Immune Reprogramming.
Anette Christ, Patrick Günther, Mario A R Lauterbach, Peter Duewell, Debjani Biswas, Karin Pelka, Claus J Scholz, Marije Oosting, Kristian Haendler, Kevin Baßler,[...]. Cell 2018
412
7

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
7

Genome-wide profiling identifies epithelial cell genes associated with asthma and with treatment response to corticosteroids.
Prescott G Woodruff, Homer A Boushey, Gregory M Dolganov, Chris S Barker, Yee Hwa Yang, Samantha Donnelly, Almut Ellwanger, Sukhvinder S Sidhu, Trang P Dao-Pick, Carlos Pantoja,[...]. Proc Natl Acad Sci U S A 2007
587
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.