Antonis Rokas, Jennifer H Wisecaver, Abigail L Lind. Nat Rev Microbiol 2018
Times Cited: 77
Times Cited: 77
Times Cited
Times Co-cited
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Fungal secondary metabolism: regulation, function and drug discovery.
Nancy P Keller. Nat Rev Microbiol 2019
Nancy P Keller. Nat Rev Microbiol 2019
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Drivers of genetic diversity in secondary metabolic gene clusters within a fungal species.
Abigail L Lind, Jennifer H Wisecaver, Catarina Lameiras, Philipp Wiemann, Jonathan M Palmer, Nancy P Keller, Fernando Rodrigues, Gustavo H Goldman, Antonis Rokas. PLoS Biol 2017
Abigail L Lind, Jennifer H Wisecaver, Catarina Lameiras, Philipp Wiemann, Jonathan M Palmer, Nancy P Keller, Fernando Rodrigues, Gustavo H Goldman, Antonis Rokas. PLoS Biol 2017
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Fungal secondary metabolism - from biochemistry to genomics.
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Metabolic Gene Clusters in Eukaryotes.
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Global analysis of biosynthetic gene clusters reveals vast potential of secondary metabolite production in Penicillium species.
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Fungal metabolic gene clusters-caravans traveling across genomes and environments.
Jennifer H Wisecaver, Antonis Rokas. Front Microbiol 2015
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Linking secondary metabolites to gene clusters through genome sequencing of six diverse Aspergillus species.
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Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking.
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Prototype of an intertwined secondary-metabolite supercluster.
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MycoCosm portal: gearing up for 1000 fungal genomes.
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Biosynthetic gene clusters and the evolution of fungal chemodiversity.
Antonis Rokas, Matthew E Mead, Jacob L Steenwyk, Huzefa A Raja, Nicholas H Oberlies. Nat Prod Rep 2020
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RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.
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antiSMASH 4.0-improvements in chemistry prediction and gene cluster boundary identification.
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MAFFT multiple sequence alignment software version 7: improvements in performance and usability.
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Physical linkage of metabolic genes in fungi is an adaptation against the accumulation of toxic intermediate compounds.
Kriston L McGary, Jason C Slot, Antonis Rokas. Proc Natl Acad Sci U S A 2013
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Plant metabolic clusters - from genetics to genomics.
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The evolution of fungal metabolic pathways.
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Multiple GAL pathway gene clusters evolved independently and by different mechanisms in fungi.
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Minimum Information about a Biosynthetic Gene cluster.
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Comparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus.
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Tempo and Mode of Genome Evolution in the Budding Yeast Subphylum.
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OrthoFinder: phylogenetic orthology inference for comparative genomics.
David M Emms, Steven Kelly. Genome Biol 2019
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VelB/VeA/LaeA complex coordinates light signal with fungal development and secondary metabolism.
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Ozgür Bayram, Sven Krappmann, Min Ni, Jin Woo Bok, Kerstin Helmstaedt, Oliver Valerius, Susanna Braus-Stromeyer, Nak-Jung Kwon, Nancy P Keller, Jae-Hyuk Yu,[...]. Science 2008
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Translating biosynthetic gene clusters into fungal armor and weaponry.
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SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.
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A Global Coexpression Network Approach for Connecting Genes to Specialized Metabolic Pathways in Plants.
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A scalable platform to identify fungal secondary metabolites and their gene clusters.
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A Robust Phylogenomic Time Tree for Biotechnologically and Medically Important Fungi in the Genera Aspergillus and Penicillium.
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antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters.
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The Fusarium graminearum histone H3 K27 methyltransferase KMT6 regulates development and expression of secondary metabolite gene clusters.
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