A citation-based method for searching scientific literature

Rebecca Chowdhury, Lauren A Laboissonniere, Andrea K Wester, Madison Muller, Jeffrey M Trimarchi. PLoS One 2018
Times Cited: 2







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The E3 ubiquitin ligase Trim7 mediates c-Jun/AP-1 activation by Ras signalling.
Atanu Chakraborty, Markus E Diefenbacher, Anastasia Mylona, Olivier Kassel, Axel Behrens. Nat Commun 2015
39
50

KEGG: kyoto encyclopedia of genes and genomes.
M Kanehisa, S Goto. Nucleic Acids Res 2000
50

TIMER: A Web Server for Comprehensive Analysis of Tumor-Infiltrating Immune Cells.
Taiwen Li, Jingyu Fan, Binbin Wang, Nicole Traugh, Qianming Chen, Jun S Liu, Bo Li, X Shirley Liu. Cancer Res 2017
50

Trim24 targets endogenous p53 for degradation.
Kendra Allton, Abhinav K Jain, Hans-Martin Herz, Wen-Wei Tsai, Sung Yun Jung, Jun Qin, Andreas Bergmann, Randy L Johnson, Michelle Craig Barton. Proc Natl Acad Sci U S A 2009
173
50

E3 ubiquitin ligase tripartite motif-containing 71 promotes the proliferation of non-small cell lung cancer through the inhibitor of kappaB-α/nuclear factor kappaB pathway.
Hongjiu Ren, Yitong Xu, Qiongzi Wang, Jun Jiang, Wudumuli, Linping Hui, Qingfu Zhang, Xiupeng Zhang, Enhua Wang, Limei Sun,[...]. Oncotarget 2017
14
50

Identification of key genes and pathways for melanoma in the TRIM family.
YiJun Xia, Jun Zhao, Chunjun Yang. Cancer Med 2020
6
50

Towards a knowledge-based Human Protein Atlas.
Mathias Uhlen, Per Oksvold, Linn Fagerberg, Emma Lundberg, Kalle Jonasson, Mattias Forsberg, Martin Zwahlen, Caroline Kampf, Kenneth Wester, Sophia Hober,[...]. Nat Biotechnol 2010
50

TRIM16 acts as an E3 ubiquitin ligase and can heterodimerize with other TRIM family members.
Jessica L Bell, Alena Malyukova, Jessica K Holien, Jessica Koach, Michael W Parker, Maria Kavallaris, Glenn M Marshall, Belamy B Cheung. PLoS One 2012
61
50

TRIM65 supports bladder urothelial carcinoma cell aggressiveness by promoting ANXA2 ubiquitination and degradation.
Wen-Su Wei, Xin Chen, Li-Yi Guo, Xiang-Dong Li, Ming-Hui Deng, Gang-Jun Yuan, Le-Ye He, Yong-Hong Li, Zhi-Lin Zhang, Li-Juan Jiang,[...]. Cancer Lett 2018
22
50

TRIM27 functions as an oncogene by activating epithelial-mesenchymal transition and p-AKT in colorectal cancer.
Yue Zhang, Yifei Feng, Dongjian Ji, Qingyuan Wang, Wenwei Qian, Shijia Wang, Zhiyuan Zhang, Bing Ji, Chuan Zhang, Yueming Sun,[...]. Int J Oncol 2018
32
50

TRIM proteins and cancer.
Shigetsugu Hatakeyama. Nat Rev Cancer 2011
432
50

Melanoma.
Dirk Schadendorf, David E Fisher, Claus Garbe, Jeffrey E Gershenwald, Jean-Jacques Grob, Allan Halpern, Meenhard Herlyn, Michael A Marchetti, Grant McArthur, Antoni Ribas,[...]. Nat Rev Dis Primers 2015
213
50

TRIM37 is a new histone H2A ubiquitin ligase and breast cancer oncoprotein.
Sanchita Bhatnagar, Claude Gazin, Lynn Chamberlain, Jianhong Ou, Xiaochun Zhu, Jogender S Tushir, Ching-Man Virbasius, Ling Lin, Lihua J Zhu, Narendra Wajapeyee,[...]. Nature 2014
95
50

ONCOMINE: a cancer microarray database and integrated data-mining platform.
Daniel R Rhodes, Jianjun Yu, K Shanker, Nandan Deshpande, Radhika Varambally, Debashis Ghosh, Terrence Barrette, Akhilesh Pandey, Arul M Chinnaiyan. Neoplasia 2004
50

Inhibition of Macrophage Complement Receptor CRIg by TRIM72 Polarizes Innate Immunity of the Lung.
Nagaraja Nagre, Xiaofei Cong, César Terrazas, Ian Pepper, John M Schreiber, Hongyun Fu, Joshua M Sill, John W Christman, Abhay R Satoskar, Xiaoli Zhao. Am J Respir Cell Mol Biol 2018
8
50

Expression profiling of TRIM protein family in THP1-derived macrophages following TLR stimulation.
Mei-Xiu Jiang, Xuan Hong, Bin-Bin Liao, Shui-Zhen Shi, Xiao-Fang Lai, Huai-Yu Zheng, Lin Xie, Yuan Wang, Xiao-Lei Wang, Hong-Bo Xin,[...]. Sci Rep 2017
24
50

TRIM29 prevents hepatocellular carcinoma progression by inhibiting Wnt/β-catenin signaling pathway.
Mingxing Xu, Jingxiong Hu, Boxuan Zhou, Yuesi Zhong, Nan Lin, Ruiyun Xu. Acta Biochim Biophys Sin (Shanghai) 2019
8
50

Trim71 cooperates with microRNAs to repress Cdkn1a expression and promote embryonic stem cell proliferation.
Hao-Ming Chang, Natalia J Martinez, James E Thornton, John P Hagan, Khang D Nguyen, Richard I Gregory. Nat Commun 2012
92
50

TRIM2 is a novel promoter of human colorectal cancer.
Hua Cao, Yi Fang, Qiwen Liang, Jianzhong Wang, Bijun Luo, Guanghao Zeng, Tingting Zhang, Xiaoqian Jing, Xiongjun Wang. Scand J Gastroenterol 2019
7
50

TRIM family proteins: retroviral restriction and antiviral defence.
Sébastien Nisole, Jonathan P Stoye, Ali Saïb. Nat Rev Microbiol 2005
534
50

TRIM2 regulates the development and metastasis of tumorous cells of osteosarcoma.
Yi Qin, Jichao Ye, Fulan Zhao, Shaoyu Hu, Suwei Wang. Int J Oncol 2018
13
50

TRIM proteins in cancer.
Valeria Cambiaghi, Virginia Giuliani, Sara Lombardi, Cristiano Marinelli, Francesca Toffalorio, Pier Giuseppe Pelicci. Adv Exp Med Biol 2012
86
50

The DAVID Gene Functional Classification Tool: a novel biological module-centric algorithm to functionally analyze large gene lists.
Da Wei Huang, Brad T Sherman, Qina Tan, Jack R Collins, W Gregory Alvord, Jean Roayaei, Robert Stephens, Michael W Baseler, H Clifford Lane, Richard A Lempicki. Genome Biol 2007
50


Macrophage production and activation are dependent on TRIM33.
Anne-Sophie Gallouet, Federica Ferri, Vanessa Petit, Aude Parcelier, Daniel Lewandowski, Nathalie Gault, Vilma Barroca, Stéphanie Le Gras, Eric Soler, Frank Grosveld,[...]. Oncotarget 2017
16
50

E3 Ubiquitin Ligase TRIM Proteins, Cell Cycle and Mitosis.
Santina Venuto, Giuseppe Merla. Cells 2019
32
50

Melanoma.
Dirk Schadendorf, Alexander C J van Akkooi, Carola Berking, Klaus G Griewank, Ralf Gutzmer, Axel Hauschild, Andreas Stang, Alexander Roesch, Selma Ugurel. Lancet 2018
314
50


The E3 ubiquitin ligase MID1/TRIM18 promotes atypical ubiquitination of the BRCA2-associated factor 35, BRAF35.
Melania E Zanchetta, Luisa M R Napolitano, Danilo Maddalo, Germana Meroni. Biochim Biophys Acta Mol Cell Res 2017
7
50

Melanoma.
Brian Owens. Nature 2014
29
50

Emerging RNA-binding roles in the TRIM family of ubiquitin ligases.
Felix Preston Williams, Kevin Haubrich, Cecilia Perez-Borrajero, Janosch Hennig. Biol Chem 2019
20
50

The Human Cytomegalovirus IE1 Protein Antagonizes PML Nuclear Body-Mediated Intrinsic Immunity via the Inhibition of PML De Novo SUMOylation.
Eva-Maria Schilling, Myriam Scherer, Nina Reuter, Johannes Schweininger, Yves A Muller, Thomas Stamminger. J Virol 2017
29
50

GEPIA: a web server for cancer and normal gene expression profiling and interactive analyses.
Zefang Tang, Chenwei Li, Boxi Kang, Ge Gao, Cheng Li, Zemin Zhang. Nucleic Acids Res 2017
50

Tripartite Motif-Containing 46 Promotes Viability and Inhibits Apoptosis of Osteosarcoma Cells by Activating NF-B Signaling Through Ubiquitination of PPAR.
Wenwei Jiang, Xinyu Cai, Tianyang Xu, Kaiyuan Liu, Dong Yang, Lin Fan, Guodong Li, Xiao Yu. Oncol Res 2020
4
50

A complex of the ubiquitin ligase TRIM32 and the deubiquitinase USP7 balances the level of c-Myc ubiquitination and thereby determines neural stem cell fate specification.
Sarah Nicklas, Anna-Lena Hillje, Satoshi Okawa, Ina-Maria Rudolph, Franziska Melanie Collmann, Thea van Wuellen, Antonio Del Sol, Jens C Schwamborn. Cell Death Differ 2019
25
50



Tripartite Motif 8 Deficiency Relieves Hepatic Ischaemia/reperfusion Injury via TAK1-dependent Signalling Pathways.
Qiu Tao, Wang Tianyu, Zhou Jiangqiao, Chen Zhongbao, Ma Xiaoxiong, Zhang Long, Zou Jilin. Int J Biol Sci 2019
12
50

TRIM proteins and diseases.
Masashi Watanabe, Shigetsugu Hatakeyama. J Biochem 2017
78
50

The interplay between viruses and TRIM family proteins.
Ramisha Khan, Amna Khan, Amjad Ali, Muhammad Idrees. Rev Med Virol 2019
16
50

An Integrated Systems Biology Approach Identifies TRIM25 as a Key Determinant of Breast Cancer Metastasis.
Logan A Walsh, Mariano J Alvarez, Erich Y Sabio, Marsha Reyngold, Vladimir Makarov, Suranjit Mukherjee, Ken-Wing Lee, Alexis Desrichard, Şevin Turcan, Martin G Dalin,[...]. Cell Rep 2017
49
50

Age-Specific Incidence of Melanoma in the United States.
Kelly G Paulson, Deepti Gupta, Teresa S Kim, Joshua R Veatch, David R Byrd, Shailender Bhatia, Katherine Wojcik, Aude G Chapuis, John A Thompson, Margaret M Madeleine,[...]. JAMA Dermatol 2020
32
50

The complexity of TRIM28 contribution to cancer.
Patrycja Czerwińska, Sylwia Mazurek, Maciej Wiznerowicz. J Biomed Sci 2017
42
50


Gene ontology: tool for the unification of biology. The Gene Ontology Consortium.
M Ashburner, C A Ball, J A Blake, D Botstein, H Butler, J M Cherry, A P Davis, K Dolinski, S S Dwight, J T Eppig,[...]. Nat Genet 2000
50


Proteasome inhibitors uncouple rhesus TRIM5alpha restriction of HIV-1 reverse transcription and infection.
Xiaolu Wu, Jenny L Anderson, Edward M Campbell, Ajith M Joseph, Thomas J Hope. Proc Natl Acad Sci U S A 2006
221
50

TRIM5α and TRIM22 are differentially regulated according to HIV-1 infection phase and compartment.
Ravesh Singh, Vinod Patel, Marianne W Mureithi, Vivek Naranbhai, Duran Ramsuran, Sahil Tulsi, Keshni Hiramen, Lise Werner, Koleka Mlisana, Marcus Altfeld,[...]. J Virol 2014
16
50


K63-Linked Ubiquitin Is Required for Restriction of HIV-1 Reverse Transcription and Capsid Destabilization by Rhesus TRIM5α.
Sabrina Imam, Sevnur Kömürlü, Jessica Mattick, Anastasia Selyutina, Sarah Talley, Amani Eddins, Felipe Diaz-Griffero, Edward M Campbell. J Virol 2019
4
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.