A citation-based method for searching scientific literature

Sudeshna Manna, Seergazhi G Srivatsan. RSC Adv 2018
Times Cited: 16







List of co-cited articles
118 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Quadruplex DNA: sequence, topology and structure.
Sarah Burge, Gary N Parkinson, Pascale Hazel, Alan K Todd, Stephen Neidle. Nucleic Acids Res 2006
31

Fluorescent analogs of biomolecular building blocks: design, properties, and applications.
Renatus W Sinkeldam, Nicholas J Greco, Yitzhak Tor. Chem Rev 2010
440
25

G-quadruplexes and their regulatory roles in biology.
Daniela Rhodes, Hans J Lipps. Nucleic Acids Res 2015
661
25


Improved curve fitting procedures to determine equilibrium binding constants.
Frank H Stootman, Dianne M Fisher, Alison Rodger, Janice R Aldrich-Wright. Analyst 2006
67
18

Fluorescent fiber-optic calcium sensor for physiological measurements.
M Shortreed, R Kopelman, M Kuhn, B Hoyland. Anal Chem 1996
209
18

Far-red fluorescent probes for canonical and non-canonical nucleic acid structures: current progress and future implications.
Y V Suseela, Nagarjun Narayanaswamy, Sumon Pratihar, Thimmaiah Govindaraju. Chem Soc Rev 2018
60
18

Recent Developments in G-Quadruplex Probes.
Dik-Lung Ma, Zhihong Zhang, Modi Wang, Lihua Lu, Hai-Jing Zhong, Chung-Hang Leung. Chem Biol 2015
80
18

Real-time monitoring of DNA G-quadruplexes in living cells with a small-molecule fluorescent probe.
Suge Zhang, Hongxia Sun, Lixia Wang, Yan Liu, Hongbo Chen, Qian Li, Aijiao Guan, Meirong Liu, Yalin Tang. Nucleic Acids Res 2018
41
18

Fluorescent probes for G-quadruplex structures.
Balayeshwanth R Vummidi, Jawad Alzeer, Nathan W Luedtke. Chembiochem 2013
127
18

Highly fluorescent guanosine mimics for folding and energy transfer studies.
Anaëlle Dumas, Nathan W Luedtke. Nucleic Acids Res 2011
40
18

Heavy atom containing fluorescent ribonucleoside analog probe for the fluorescence detection of RNA-ligand binding.
Maroti G Pawar, Ashok Nuthanakanti, Seergazhi G Srivatsan. Bioconjug Chem 2013
18
18

Circular dichroism and guanine quadruplexes.
Michaela Vorlíčková, Iva Kejnovská, Janos Sagi, Daniel Renčiuk, Klára Bednářová, Jitka Motlová, Jaroslav Kypr. Methods 2012
245
18

G-quadruplexes and G-quadruplex ligands: targets and tools in antiviral therapy.
Emanuela Ruggiero, Sara N Richter. Nucleic Acids Res 2018
136
18

Advances in the cellular structural biology of nucleic acids.
Ilektra-Chara Giassa, Jan Rynes, Tomas Fessl, Silvie Foldynova-Trantirkova, Lukas Trantirek. FEBS Lett 2018
18
18


A Simple Molecular Rotor for Defining Nucleoside Environment within a DNA Aptamer-Protein Complex.
Thomas Z Cservenyi, Abigail J Van Riesen, Florence D Berger, Ahmed Desoky, Richard A Manderville. ACS Chem Biol 2016
22
18

Fluorescent nucleobases as tools for studying DNA and RNA.
Wang Xu, Ke Min Chan, Eric T Kool. Nat Chem 2017
99
18

DNA secondary structures: stability and function of G-quadruplex structures.
Matthew L Bochman, Katrin Paeschke, Virginia A Zakian. Nat Rev Genet 2012
707
18

Existence and consequences of G-quadruplex structures in DNA.
Pierre Murat, Shankar Balasubramanian. Curr Opin Genet Dev 2014
225
18

Quantitative visualization of DNA G-quadruplex structures in human cells.
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
18


The regulation and functions of DNA and RNA G-quadruplexes.
Dhaval Varshney, Jochen Spiegel, Katherine Zyner, David Tannahill, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2020
124
18

Label-free luminescent oligonucleotide-based probes.
Dik-Lung Ma, Hong-Zhang He, Ka-Ho Leung, Hai-Jing Zhong, Daniel Shiu-Hin Chan, Chung-Hang Leung. Chem Soc Rev 2013
132
12


Chemistry-Driven Approaches for Ultrasensitive Nucleic Acid Detection.
Sarah J Smith, Carine R Nemr, Shana O Kelley. J Am Chem Soc 2017
49
12

Polarization spectroscopy methods in the determination of interactions of small molecules with nucleic acids - tutorial.
Tamara Šmidlehner, Ivo Piantanida, Gennaro Pescitelli. Beilstein J Org Chem 2018
31
12

New strategies for fluorescent probe design in medical diagnostic imaging.
Hisataka Kobayashi, Mikako Ogawa, Raphael Alford, Peter L Choyke, Yasuteru Urano. Chem Rev 2010
996
12

Tuning the selectivity of N-alkylated styrylquinolinium dyes for sensing of G-quadruplex DNA.
Ming-Qi Wang, Jing Xu, Lan Zhang, Yue Liao, Heng Wei, Ying-Ying Yin, Qiang Liu, Yuan Zhang. Bioorg Med Chem 2019
7
28

Fluorescent chemosensors: the past, present and future.
Di Wu, Adam C Sedgwick, Thorfinnur Gunnlaugsson, Engin U Akkaya, Juyoung Yoon, Tony D James. Chem Soc Rev 2017
402
12

Sequence-specific recognition of DNA minor groove by an NIR-fluorescence switch-on probe and its potential applications.
Nagarjun Narayanaswamy, Shubhajit Das, Pralok K Samanta, Khadija Banu, Guru Prasad Sharma, Neelima Mondal, Suman K Dhar, Swapan K Pati, T Govindaraju. Nucleic Acids Res 2015
33
12

Interaction of crown ether-annelated styryl dyes with double-stranded DNA.
Daria V Berdnikova, Olga A Fedorova, Elena V Tulyakova, Haixing Li, Sarah Kölsch, Heiko Ihmels. Photochem Photobiol 2015
8
25


A Novel Styryldehydropyridocolinium Homodimer: Synthesis and Fluorescence Properties Upon Interaction with DNA.
Huirong Yao, Lifang Chang, Chang Liu, Xiaojie Jiao, Song He, Haijun Liu, Xianshun Zeng. J Fluoresc 2015
4
50

Methods for investigating G-quadruplex DNA/ligand interactions.
Pierre Murat, Yashveer Singh, Eric Defrancq. Chem Soc Rev 2011
127
12

Quinolizinium as a new fluorescent lysosomotropic probe.
Emmanouil Zacharioudakis, Tatiana Cañeque, Raúl Custodio, Sebastian Müller, Ana M Cuadro, Juan J Vaquero, Raphaël Rodriguez. Bioorg Med Chem Lett 2017
5
40

Visualizing the quadruplex: from fluorescent ligands to light-up probes.
Eric Largy, Anton Granzhan, Florian Hamon, Daniela Verga, Marie-Paule Teulade-Fichou. Top Curr Chem 2013
78
12

A Dual-App Nucleoside Probe Provides Structural Insights into the Human Telomeric Overhang in Live Cells.
Sudeshna Manna, Debayan Sarkar, Seergazhi G Srivatsan. J Am Chem Soc 2018
26
12

Crystal structure of parallel quadruplexes from human telomeric DNA.
Gary N Parkinson, Michael P H Lee, Stephen Neidle. Nature 2002
12

DNA G-quadruplexes in the human genome: detection, functions and therapeutic potential.
Robert Hänsel-Hertsch, Marco Di Antonio, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2017
348
12

Thioflavin T as an efficient inducer and selective fluorescent sensor for the human telomeric G-quadruplex DNA.
Jyotirmayee Mohanty, Nilotpal Barooah, V Dhamodharan, S Harikrishna, P I Pradeepkumar, Achikanath C Bhasikuttan. J Am Chem Soc 2013
291
12



Copper-Induced Topology Switching and Thrombin Inhibition with Telomeric DNA G-Quadruplexes.
David M Engelhard, Julia Nowack, Guido H Clever. Angew Chem Int Ed Engl 2017
34
12

8-Vinyl-2'-deoxyguanosine as a fluorescent 2'-deoxyguanosine mimic for investigating DNA hybridization and topology.
André Nadler, Julian Strohmeier, Ulf Diederichsen. Angew Chem Int Ed Engl 2011
40
12


Conformational changes of non-B DNA.
Jungkweon Choi, Tetsuro Majima. Chem Soc Rev 2011
186
12

Optimized end-stacking provides specificity of N-methyl mesoporphyrin IX for human telomeric G-quadruplex DNA.
John M Nicoludis, Stephen T Miller, Philip D Jeffrey, Steven P Barrett, Paul R Rablen, Thomas J Lawton, Liliya A Yatsunyk. J Am Chem Soc 2012
115
12

Human telomeric sequence forms a hybrid-type intramolecular G-quadruplex structure with mixed parallel/antiparallel strands in potassium solution.
Attila Ambrus, Ding Chen, Jixun Dai, Tiffanie Bialis, Roger A Jones, Danzhou Yang. Nucleic Acids Res 2006
748
12

Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription.
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.