A citation-based method for searching scientific literature

Nicholas M Timme, Christopher Lapish. eNeuro 2018
Times Cited: 41







List of co-cited articles
184 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Measuring information transfer
Schreiber. Phys Rev Lett 2000
36

Information theory and neural coding.
A Borst, F E Theunissen. Nat Neurosci 1999
570
21

Extending transfer entropy improves identification of effective connectivity in a spiking cortical network model.
Shinya Ito, Michael E Hansen, Randy Heiland, Andrew Lumsdaine, Alan M Litke, John M Beggs. PLoS One 2011
74
14

Transfer entropy--a model-free measure of effective connectivity for the neurosciences.
Raul Vicente, Michael Wibral, Michael Lindner, Gordon Pipa. J Comput Neurosci 2011
283
12

Estimating mutual information.
Alexander Kraskov, Harald Stögbauer, Peter Grassberger. Phys Rev E Stat Nonlin Soft Matter Phys 2004
567
12

Correcting for the sampling bias problem in spike train information measures.
Stefano Panzeri, Riccardo Senatore, Marcelo A Montemurro, Rasmus S Petersen. J Neurophysiol 2007
227
9

TRENTOOL: a Matlab open source toolbox to analyse information flow in time series data with transfer entropy.
Michael Lindner, Raul Vicente, Viola Priesemann, Michael Wibral. BMC Neurosci 2011
93
9


Measuring information-transfer delays.
Michael Wibral, Nicolae Pampu, Viola Priesemann, Felix Siebenhühner, Hannes Seiwert, Michael Lindner, Joseph T Lizier, Raul Vicente. PLoS One 2013
101
9

Granger causality and transfer entropy are equivalent for Gaussian variables.
Lionel Barnett, Adam B Barrett, Anil K Seth. Phys Rev Lett 2009
286
9


Functional and effective connectivity: a review.
Karl J Friston. Brain Connect 2011
7


Dimensionality reduction for large-scale neural recordings.
John P Cunningham, Byron M Yu. Nat Neurosci 2014
332
7


Measuring and interpreting neuronal correlations.
Marlene R Cohen, Adam Kohn. Nat Neurosci 2011
515
7

Kernel bandwidth optimization in spike rate estimation.
Hideaki Shimazaki, Shigeru Shinomoto. J Comput Neurosci 2010
109
7

A toolbox for the fast information analysis of multiple-site LFP, EEG and spike train recordings.
Cesare Magri, Kevin Whittingstall, Vanessa Singh, Nikos K Logothetis, Stefano Panzeri. BMC Neurosci 2009
135
7

Python for information theoretic analysis of neural data.
Robin A A Ince, Rasmus S Petersen, Daniel C Swan, Stefano Panzeri. Front Neuroinform 2009
31
9

Synergy, redundancy, and multivariate information measures: an experimentalist's perspective.
Nicholas Timme, Wesley Alford, Benjamin Flecker, John M Beggs. J Comput Neurosci 2014
50
7

Information transduction capacity of noisy biochemical signaling networks.
Raymond Cheong, Alex Rhee, Chiaochun Joanne Wang, Ilya Nemenman, Andre Levchenko. Science 2011
252
7

Efficient transfer entropy analysis of non-stationary neural time series.
Patricia Wollstadt, Mario Martínez-Zarzuela, Raul Vicente, Francisco J Díaz-Pernas, Michael Wibral. PLoS One 2014
43
7

Systems biology. Accurate information transmission through dynamic biochemical signaling networks.
Jangir Selimkhanov, Brooks Taylor, Jason Yao, Anna Pilko, John Albeck, Alexander Hoffmann, Lev Tsimring, Roy Wollman. Science 2014
171
7


Network structure of cerebral cortex shapes functional connectivity on multiple time scales.
Christopher J Honey, Rolf Kötter, Michael Breakspear, Olaf Sporns. Proc Natl Acad Sci U S A 2007
917
7

Large-scale directed network inference with multivariate transfer entropy and hierarchical statistical testing.
Leonardo Novelli, Patricia Wollstadt, Pedro Mediano, Michael Wibral, Joseph T Lizier. Netw Neurosci 2019
20
15

Model-free reconstruction of excitatory neuronal connectivity from calcium imaging signals.
Olav Stetter, Demian Battaglia, Jordi Soriano, Theo Geisel. PLoS Comput Biol 2012
110
7

Transfer entropy reconstruction and labeling of neuronal connections from simulated calcium imaging.
Javier G Orlandi, Olav Stetter, Jordi Soriano, Theo Geisel, Demian Battaglia. PLoS One 2014
34
8

Analysing connectivity with Granger causality and dynamic causal modelling.
Karl Friston, Rosalyn Moran, Anil K Seth. Curr Opin Neurobiol 2013
297
7

Dorsal tegmental dopamine neurons gate associative learning of fear.
Florian Groessl, Thomas Munsch, Susanne Meis, Johannes Griessner, Joanna Kaczanowska, Pinelopi Pliota, Dominic Kargl, Sylvia Badurek, Klaus Kraitsy, Arash Rassoulpour,[...]. Nat Neurosci 2018
53
7


On the distribution of firing rates in networks of cortical neurons.
Alex Roxin, Nicolas Brunel, David Hansel, Gianluigi Mongillo, Carl van Vreeswijk. J Neurosci 2011
94
4

DataHigh: graphical user interface for visualizing and interacting with high-dimensional neural activity.
Benjamin R Cowley, Matthew T Kaufman, Zachary S Butler, Mark M Churchland, Stephen I Ryu, Krishna V Shenoy, Byron M Yu. J Neural Eng 2013
15
13


Identifying true brain interaction from EEG data using the imaginary part of coherency.
Guido Nolte, Ou Bai, Lewis Wheaton, Zoltan Mari, Sherry Vorbach, Mark Hallett. Clin Neurophysiol 2004
817
4

High gamma power is phase-locked to theta oscillations in human neocortex.
R T Canolty, E Edwards, S S Dalal, M Soltani, S S Nagarajan, H E Kirsch, M S Berger, N M Barbaro, R T Knight. Science 2006
4

Spatio-temporal correlations and visual signalling in a complete neuronal population.
Jonathan W Pillow, Jonathon Shlens, Liam Paninski, Alexander Sher, Alan M Litke, E J Chichilnisky, Eero P Simoncelli. Nature 2008
596
4

Demixed principal component analysis of neural population data.
Dmitry Kobak, Wieland Brendel, Christos Constantinidis, Claudia E Feierstein, Adam Kepecs, Zachary F Mainen, Xue-Lian Qi, Ranulfo Romo, Naoshige Uchida, Christian K Machens. Elife 2016
141
4

Multiple neural spike train data analysis: state-of-the-art and future challenges.
Emery N Brown, Robert E Kass, Partha P Mitra. Nat Neurosci 2004
375
4

The pairwise phase consistency: a bias-free measure of rhythmic neuronal synchronization.
Martin Vinck, Marijn van Wingerden, Thilo Womelsdorf, Pascal Fries, Cyriel M A Pennartz. Neuroimage 2010
201
4

Local shuffling of spike trains boosts the accuracy of spike train spectral analysis.
Michal Rivlin-Etzion, Ya'acov Ritov, Gali Heimer, Hagai Bergman, Izhar Bar-Gad. J Neurophysiol 2006
59
4

Measuring phase-amplitude coupling between neuronal oscillations of different frequencies.
Adriano B L Tort, Robert Komorowski, Howard Eichenbaum, Nancy Kopell. J Neurophysiol 2010
500
4

Unsupervised Discovery of Demixed, Low-Dimensional Neural Dynamics across Multiple Timescales through Tensor Component Analysis.
Alex H Williams, Tony Hyun Kim, Forea Wang, Saurabh Vyas, Stephen I Ryu, Krishna V Shenoy, Mark Schnitzer, Tamara G Kolda, Surya Ganguli. Neuron 2018
44
4

Shifts in gamma phase-amplitude coupling frequency from theta to alpha over posterior cortex during visual tasks.
Bradley Voytek, Ryan T Canolty, Avgusta Shestyuk, Nathan E Crone, Josef Parvizi, Robert T Knight. Front Hum Neurosci 2010
232
4

Summing up the noise in gene networks.
Johan Paulsson. Nature 2004
751
4


Neural complexity and structural connectivity.
L Barnett, C L Buckley, S Bullock. Phys Rev E Stat Nonlin Soft Matter Phys 2009
26
7

Transfer entropy in continuous time, with applications to jump and neural spiking processes.
Richard E Spinney, Mikhail Prokopenko, Joseph T Lizier. Phys Rev E 2017
17
11

Redundancy in information transmission in a two-step cascade.
Ayan Biswas, Suman K Banik. Phys Rev E 2016
8
25

The Impact of Different Sources of Fluctuations on Mutual Information in Biochemical Networks.
Michael Chevalier, Ophelia Venturelli, Hana El-Samad. PLoS Comput Biol 2015
6
33


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.