A citation-based method for searching scientific literature

Karolina A Aberg, Brian Dean, Andrey A Shabalin, Robin F Chan, Laura K M Han, Min Zhao, Gerard van Grootheest, Lin Y Xie, Yuri Milaneschi, Shaunna L Clark, Gustavo Turecki, Brenda W J H Penninx, Edwin J C G van den Oord. Mol Psychiatry 2020
Times Cited: 30







List of co-cited articles
252 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


DNA methylation arrays as surrogate measures of cell mixture distribution.
Eugene Andres Houseman, William P Accomando, Devin C Koestler, Brock C Christensen, Carmen J Marsit, Heather H Nelson, John K Wiencke, Karl T Kelsey. BMC Bioinformatics 2012
30

A methylation study of long-term depression risk.
Shaunna L Clark, Mohammad W Hattab, Robin F Chan, Andrey A Shabalin, Laura K M Han, Min Zhao, Johannes H Smit, Rick Jansen, Yuri Milaneschi, Lin Ying Xie,[...]. Mol Psychiatry 2020
25
28

BECon: a tool for interpreting DNA methylation findings from blood in the context of brain.
R D Edgar, M J Jones, M J Meaney, G Turecki, M S Kobor. Transl Psychiatry 2017
108
20

DNA Methylation Signatures of Depressive Symptoms in Middle-aged and Elderly Persons: Meta-analysis of Multiethnic Epigenome-wide Studies.
Olivera Story Jovanova, Ivana Nedeljkovic, Derek Spieler, Rosie M Walker, Chunyu Liu, Michelle Luciano, Jan Bressler, Jennifer Brody, Amanda J Drake, Kathryn L Evans,[...]. JAMA Psychiatry 2018
49
20

Astrocytic abnormalities and global DNA methylation patterns in depression and suicide.
C Nagy, M Suderman, J Yang, M Szyf, N Mechawar, C Ernst, G Turecki. Mol Psychiatry 2015
167
20

Enrichment methods provide a feasible approach to comprehensive and adequately powered investigations of the brain methylome.
Robin F Chan, Andrey A Shabalin, Lin Y Xie, Daniel E Adkins, Min Zhao, Gustavo Turecki, Shaunna L Clark, Karolina A Aberg, Edwin J C G van den Oord. Nucleic Acids Res 2017
24
25

RaMWAS: fast methylome-wide association study pipeline for enrichment platforms.
Andrey A Shabalin, Mohammad W Hattab, Shaunna L Clark, Robin F Chan, Gaurav Kumar, Karolina A Aberg, Edwin J C G van den Oord. Bioinformatics 2018
27
22

Genetic epidemiology of major depression: review and meta-analysis.
P F Sullivan, M C Neale, K S Kendler. Am J Psychiatry 2000
20

Cell Type-Specific Methylome-wide Association Studies Implicate Neurotrophin and Innate Immune Signaling in Major Depressive Disorder.
Robin F Chan, Gustavo Turecki, Andrey A Shabalin, Jerry Guintivano, Min Zhao, Lin Y Xie, Gerard van Grootheest, Zachary A Kaminsky, Brian Dean, Brenda W J H Penninx,[...]. Biol Psychiatry 2020
20
30


Integrative analysis of 111 reference human epigenomes.
Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen, Alireza Heravi-Moussavi, Pouya Kheradpour, Zhizhuo Zhang, Jianrong Wang, Michael J Ziller,[...]. Nature 2015
16

Epigenetic regulation of the glucocorticoid receptor in human brain associates with childhood abuse.
Patrick O McGowan, Aya Sasaki, Ana C D'Alessio, Sergiy Dymov, Benoit Labonté, Moshe Szyf, Gustavo Turecki, Michael J Meaney. Nat Neurosci 2009
16

A MBD-seq protocol for large-scale methylome-wide studies with (very) low amounts of DNA.
Karolina A Aberg, Robin F Chan, Andrey A Shabalin, Min Zhao, Gustavo Turecki, Nicklas Heine Staunstrup, Anna Starnawska, Ole Mors, Lin Y Xie, Edwin Jcg van den Oord. Epigenetics 2017
24
20

Genome-wide meta-analysis of depression identifies 102 independent variants and highlights the importance of the prefrontal brain regions.
David M Howard, Mark J Adams, Toni-Kim Clarke, Jonathan D Hafferty, Jude Gibson, Masoud Shirali, Jonathan R I Coleman, Saskia P Hagenaars, Joey Ward, Eleanor M Wigmore,[...]. Nat Neurosci 2019
557
16

Extracellular Signals Induce Glycoprotein M6a Clustering of Lipid Rafts and Associated Signaling Molecules.
Atsuko Honda, Yasuyuki Ito, Kazuko Takahashi-Niki, Natsuki Matsushita, Motohiro Nozumi, Hidenori Tabata, Kosei Takeuchi, Michihiro Igarashi. J Neurosci 2017
30
13

Epigenetic Aging in Major Depressive Disorder.
Laura K M Han, Moji Aghajani, Shaunna L Clark, Robin F Chan, Mohammad W Hattab, Andrey A Shabalin, Min Zhao, Gaurav Kumar, Lin Ying Xie, Rick Jansen,[...]. Am J Psychiatry 2018
92
13

Obligatory roles of dopamine D1 receptors in the dentate gyrus in antidepressant actions of a selective serotonin reuptake inhibitor, fluoxetine.
Takahide Shuto, Mahomi Kuroiwa, Naoki Sotogaku, Yukie Kawahara, Yong-Seok Oh, Jin-Hyeok Jang, Chang-Hoon Shin, Yoshinori N Ohnishi, Yuuki Hanada, Tsuyoshi Miyakawa,[...]. Mol Psychiatry 2020
24
16

What does plasma CRP tell us about peripheral and central inflammation in depression?
Jennifer C Felger, Ebrahim Haroon, Trusharth A Patel, David R Goldsmith, Evanthia C Wommack, Bobbi J Woolwine, Ngoc-Anh Le, Rachel Feinberg, Malu G Tansey, Andrew H Miller. Mol Psychiatry 2020
131
13

Emergence of 5-HT5A signaling in parvalbumin neurons mediates delayed antidepressant action.
Yotam Sagi, Lucian Medrihan, Katia George, Miles Barney, Kathryn A McCabe, Paul Greengard. Mol Psychiatry 2020
18
22

Fast gapped-read alignment with Bowtie 2.
Ben Langmead, Steven L Salzberg. Nat Methods 2012
13

Correspondence of DNA Methylation Between Blood and Brain Tissue and Its Application to Schizophrenia Research.
Esther Walton, Johanna Hass, Jingyu Liu, Joshua L Roffman, Fabio Bernardoni, Veit Roessner, Matthias Kirsch, Gabriele Schackert, Vince Calhoun, Stefan Ehrlich. Schizophr Bull 2016
157
10

An integrated genetic-epigenetic analysis of schizophrenia: evidence for co-localization of genetic associations and differential DNA methylation.
Eilis Hannon, Emma Dempster, Joana Viana, Joe Burrage, Adam R Smith, Ruby Macdonald, David St Clair, Colette Mustard, Gerome Breen, Sebastian Therman,[...]. Genome Biol 2016
165
10

Association of DNA Methylation Differences With Schizophrenia in an Epigenome-Wide Association Study.
Carolina Montano, Margaret A Taub, Andrew Jaffe, Eirikur Briem, Jason I Feinberg, Rakel Trygvadottir, Adrian Idrizi, Arni Runarsson, Birna Berndsen, Ruben C Gur,[...]. JAMA Psychiatry 2016
95
10

Epigenome-wide association study of DNA methylation in panic disorder.
Mihoko Shimada-Sugimoto, Takeshi Otowa, Taku Miyagawa, Tadashi Umekage, Yoshiya Kawamura, Miki Bundo, Kazuya Iwamoto, Mamoru Tochigi, Kiyoto Kasai, Hisanobu Kaiya,[...]. Clin Epigenetics 2017
30
10

An epigenome-wide DNA methylation study of PTSD and depression in World Trade Center responders.
P-F Kuan, M A Waszczuk, R Kotov, C J Marsit, G Guffanti, A Gonzalez, X Yang, K Koenen, E Bromet, B J Luft. Transl Psychiatry 2017
52
10

Dnmt1 and Dnmt3a maintain DNA methylation and regulate synaptic function in adult forebrain neurons.
Jian Feng, Yu Zhou, Susan L Campbell, Thuc Le, En Li, J David Sweatt, Alcino J Silva, Guoping Fan. Nat Neurosci 2010
658
10

Systematic identification of genetic influences on methylation across the human life course.
Tom R Gaunt, Hashem A Shihab, Gibran Hemani, Josine L Min, Geoff Woodward, Oliver Lyttleton, Jie Zheng, Aparna Duggirala, Wendy L McArdle, Karen Ho,[...]. Genome Biol 2016
290
10

Impact of DNMT1 and DNMT3a forebrain knockout on depressive- and anxiety like behavior in mice.
Michael J Morris, Elisa S Na, Anita E Autry, Lisa M Monteggia. Neurobiol Learn Mem 2016
30
10

Aging effects on DNA methylation modules in human brain and blood tissue.
Steve Horvath, Yafeng Zhang, Peter Langfelder, René S Kahn, Marco P M Boks, Kristel van Eijk, Leonard H van den Berg, Roel A Ophoff. Genome Biol 2012
384
10


Circuit-wide Transcriptional Profiling Reveals Brain Region-Specific Gene Networks Regulating Depression Susceptibility.
Rosemary C Bagot, Hannah M Cates, Immanuel Purushothaman, Zachary S Lorsch, Deena M Walker, Junshi Wang, Xiaojie Huang, Oliver M Schlüter, Ian Maze, Catherine J Peña,[...]. Neuron 2016
155
10

MBD-seq as a cost-effective approach for methylome-wide association studies: demonstration in 1500 case--control samples.
Karolina A Aberg, Joseph L McClay, Srilaxmi Nerella, Lin Y Xie, Shaunna L Clark, Alexandra D Hudson, Jozsef Bukszár, Daniel Adkins, Christina M Hultman, Patrick F Sullivan,[...]. Epigenomics 2012
69
10

Evaluation of Methyl-Binding Domain Based Enrichment Approaches Revisited.
Karolina A Aberg, Linying Xie, Robin F Chan, Min Zhao, Ashutosh K Pandey, Gaurav Kumar, Shaunna L Clark, Edwin J C G van den Oord. PLoS One 2015
20
15


Singar1, a novel RUN domain-containing protein, suppresses formation of surplus axons for neuronal polarity.
Tatsuya Mori, Tomoe Wada, Takahiro Suzuki, Yoshitsugu Kubota, Naoyuki Inagaki. J Biol Chem 2007
51
10

Identification of differentially methylated cell types in epigenome-wide association studies.
Shijie C Zheng, Charles E Breeze, Stephan Beck, Andrew E Teschendorff. Nat Methods 2018
66
10

The Netherlands Study of Depression and Anxiety (NESDA): rationale, objectives and methods.
Brenda W J H Penninx, Aartjan T F Beekman, Johannes H Smit, Frans G Zitman, Willem A Nolen, Philip Spinhoven, Pim Cuijpers, Peter J De Jong, Harm W J Van Marwijk, Willem J J Assendelft,[...]. Int J Methods Psychiatr Res 2008
716
10

Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression.
Naomi R Wray, Stephan Ripke, Manuel Mattheisen, Maciej Trzaskowski, Enda M Byrne, Abdel Abdellaoui, Mark J Adams, Esben Agerbo, Tracy M Air, Till M F Andlauer,[...]. Nat Genet 2018
10

Major depressive disorder and accelerated cellular aging: results from a large psychiatric cohort study.
J E Verhoeven, D Révész, E S Epel, J Lin, O M Wolkowitz, B W J H Penninx. Mol Psychiatry 2014
175
10



What do DNA methylation studies tell us about depression? A systematic review.
Muzi Li, Carl D'Arcy, Xintong Li, Tieyuan Zhang, Ridha Joober, Xiangfei Meng. Transl Psychiatry 2019
41
10

Genome-wide DNA methylation comparison between live human brain and peripheral tissues within individuals.
Patricia R Braun, Shizhong Han, Benjamin Hing, Yasunori Nagahama, Lindsey N Gaul, Jonathan T Heinzman, Andrew J Grossbach, Liesl Close, Brian J Dlouhy, Matthew A Howard,[...]. Transl Psychiatry 2019
138
10

CircDYM ameliorates depressive-like behavior by targeting miR-9 to regulate microglial activation via HSP90 ubiquitination.
Yuan Zhang, Longfei Du, Ying Bai, Bing Han, Cancan He, Liang Gong, Rongrong Huang, Ling Shen, Jie Chao, Pei Liu,[...]. Mol Psychiatry 2020
63
10

Cell encapsulation enhances antidepressant effect of the mesenchymal stem cells and counteracts depressive-like behavior of treatment-resistant depressed rats.
Kyohei Kin, Takao Yasuhara, Masahiro Kameda, Yousuke Tomita, Michiari Umakoshi, Ken Kuwahara, Ittetsu Kin, Naoya Kidani, Jun Morimoto, Mihoko Okazaki,[...]. Mol Psychiatry 2020
14
21

Systemic inflammation is associated with depressive symptoms differentially by sex and race: a longitudinal study of urban adults.
May A Beydoun, Hardeep K Obhi, Jordan Weiss, Jose A Canas, Hind A Beydoun, Michele K Evans, Alan B Zonderman. Mol Psychiatry 2020
17
17

Systemic immunization with altered myelin basic protein peptide produces sustained antidepressant-like effects.
Ying Han, Cheng-Yu Sun, Shi-Qiu Meng, Serik Tabarak, Kai Yuan, Lu Cao, Wei Yan, Ling-Zhi Xu, Jia-Hui Deng, Wei-Li Zhu,[...]. Mol Psychiatry 2020
8
37

AP-1 controls the p11-dependent antidepressant response.
Revathy U Chottekalapanda, Salina Kalik, Jodi Gresack, Alyssa Ayala, Melanie Gao, Wei Wang, Sarah Meller, Ammar Aly, Anne Schaefer, Paul Greengard. Mol Psychiatry 2020
11
27

Early-life stress impairs postnatal oligodendrogenesis and adult emotional behaviour through activity-dependent mechanisms.
Anne Teissier, Corentin Le Magueresse, Jimmy Olusakin, Belmira L S Andrade da Costa, Angela M De Stasi, Alberto Bacci, Yuka Imamura Kawasawa, Vidita A Vaidya, Patricia Gaspar. Mol Psychiatry 2020
47
10

A functional variant in the serotonin receptor 7 gene (HTR7), rs7905446, is associated with good response to SSRIs in bipolar and unipolar depression.
Ya Bin Wei, Michael McCarthy, Hongyan Ren, Tania Carrillo-Roa, Tatyana Shekhtman, Anna DeModena, Jia Jia Liu, Susan G Leckband, Ole Mors, Marcella Rietschel,[...]. Mol Psychiatry 2020
15
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.