A citation-based method for searching scientific literature

David R Calabrese, Xiang Chen, Elena C Leon, Snehal M Gaikwad, Zaw Phyo, William M Hewitt, Stephanie Alden, Thomas A Hilimire, Fahu He, Aleksandra M Michalowski, John K Simmons, Lindsey B Saunders, Shuling Zhang, Daniel Connors, Kylie J Walters, Beverly A Mock, John S Schneekloth. Nat Commun 2018
Times Cited: 59







List of co-cited articles
714 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription.
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
47

Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?
Shankar Balasubramanian, Laurence H Hurley, Stephen Neidle. Nat Rev Drug Discov 2011
986
40


High-throughput sequencing of DNA G-quadruplex structures in the human genome.
Vicki S Chambers, Giovanni Marsico, Jonathan M Boutell, Marco Di Antonio, Geoffrey P Smith, Shankar Balasubramanian. Nat Biotechnol 2015
512
35

G-quadruplex structures mark human regulatory chromatin.
Robert Hänsel-Hertsch, Dario Beraldi, Stefanie V Lensing, Giovanni Marsico, Katherine Zyner, Aled Parry, Marco Di Antonio, Jeremy Pike, Hiroshi Kimura, Masashi Narita,[...]. Nat Genet 2016
323
30

Quantitative visualization of DNA G-quadruplex structures in human cells.
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
28

Small Molecule Microarrays Enable the Identification of a Selective, Quadruplex-Binding Inhibitor of MYC Expression.
Kenneth M Felsenstein, Lindsey B Saunders, John K Simmons, Elena Leon, David R Calabrese, Shuling Zhang, Aleksandra Michalowski, Peter Gareiss, Beverly A Mock, John S Schneekloth. ACS Chem Biol 2016
78
25

Discovery of a New Four-Leaf Clover-Like Ligand as a Potent c-MYC Transcription Inhibitor Specifically Targeting the Promoter G-Quadruplex.
Ming-Hao Hu, Yu-Qing Wang, Ze-Yi Yu, Lu-Ni Hu, Tian-Miao Ou, Shuo-Bin Chen, Zhi-Shu Huang, Jia-Heng Tan. J Med Chem 2018
41
34


CX-5461 is a DNA G-quadruplex stabilizer with selective lethality in BRCA1/2 deficient tumours.
Hong Xu, Marco Di Antonio, Steven McKinney, Veena Mathew, Brandon Ho, Nigel J O'Neil, Nancy Dos Santos, Jennifer Silvester, Vivien Wei, Jessica Garcia,[...]. Nat Commun 2017
185
23

DNA G-quadruplexes in the human genome: detection, functions and therapeutic potential.
Robert Hänsel-Hertsch, Marco Di Antonio, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2017
358
23


Small-molecule interaction with a five-guanine-tract G-quadruplex structure from the human MYC promoter.
Anh Tuân Phan, Vitaly Kuryavyi, Hai Yan Gaw, Dinshaw J Patel. Nat Chem Biol 2005
337
22

Demonstration that drug-targeted down-regulation of MYC in non-Hodgkins lymphoma is directly mediated through the promoter G-quadruplex.
Robert V Brown, Forest L Danford, Vijay Gokhale, Laurence H Hurley, Tracy A Brooks. J Biol Chem 2011
110
22

Highly prevalent putative quadruplex sequence motifs in human DNA.
Alan K Todd, Matthew Johnston, Stephen Neidle. Nucleic Acids Res 2005
660
22

MYC on the path to cancer.
Chi V Dang. Cell 2012
20

G-quadruplexes and their regulatory roles in biology.
Daniela Rhodes, Hans J Lipps. Nucleic Acids Res 2015
672
20

Prevalence of quadruplexes in the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2005
20

Targeting MYC Expression through G-Quadruplexes.
Tracy A Brooks, Laurence H Hurley. Genes Cancer 2010
163
18

Solution structures of multiple G-quadruplex complexes induced by a platinum(II)-based tripod reveal dynamic binding.
Wenting Liu, Yi-Fang Zhong, Liu-Yi Liu, Chu-Tong Shen, Wenjuan Zeng, Fuyi Wang, Danzhou Yang, Zong-Wan Mao. Nat Commun 2018
35
31

Helix formation by guanylic acid.
M GELLERT, M N LIPSETT, D R DAVIES. Proc Natl Acad Sci U S A 1962
989
18

Solution structure of a G-quadruplex bound to the bisquinolinium compound Phen-DC(3).
Wan Jun Chung, Brahim Heddi, Florian Hamon, Marie-Paule Teulade-Fichou, Anh Tuân Phan. Angew Chem Int Ed Engl 2014
107
18

Quadruplex DNA: sequence, topology and structure.
Sarah Burge, Gary N Parkinson, Pascale Hazel, Alan K Todd, Stephen Neidle. Nucleic Acids Res 2006
18

The regulation and functions of DNA and RNA G-quadruplexes.
Dhaval Varshney, Jochen Spiegel, Katherine Zyner, David Tannahill, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2020
138
18

Solution structure of an intramolecular (3 + 1) human telomeric G-quadruplex bound to a telomestatin derivative.
Wan Jun Chung, Brahim Heddi, Masayuki Tera, Keisuke Iida, Kazuo Nagasawa, Anh Tuân Phan. J Am Chem Soc 2013
99
16

Ligand Design to Acquire Specificity to Intended G-Quadruplex Structures.
Sefan Asamitsu, Toshikazu Bando, Hiroshi Sugiyama. Chemistry 2019
59
16

Recent Progress of Targeted G-Quadruplex-Preferred Ligands Toward Cancer Therapy.
Sefan Asamitsu, Shunsuke Obata, Zutao Yu, Toshikazu Bando, Hiroshi Sugiyama. Molecules 2019
106
16

NMR Structure of a Triangulenium-Based Long-Lived Fluorescence Probe Bound to a G-Quadruplex.
Anita Kotar, Baifan Wang, Arun Shivalingam, Jorge Gonzalez-Garcia, Ramon Vilar, Janez Plavec. Angew Chem Int Ed Engl 2016
32
31


The Structure and Function of DNA G-Quadruplexes.
Jochen Spiegel, Santosh Adhikari, Shankar Balasubramanian. Trends Chem 2020
111
15

The dynamic character of the G-quadruplex element in the c-MYC promoter and modification by TMPyP4.
Jeyaprakashnarayanan Seenisamy, Evonne M Rezler, Tiffanie J Powell, Denise Tye, Vijay Gokhale, Chandana Sharma Joshi, Adam Siddiqui-Jain, Laurence H Hurley. J Am Chem Soc 2004
290
13

Anticancer activity of CX-3543: a direct inhibitor of rRNA biogenesis.
Denis Drygin, Adam Siddiqui-Jain, Sean O'Brien, Michael Schwaebe, Amy Lin, Josh Bliesath, Caroline B Ho, Chris Proffitt, Katy Trent, Jeffrey P Whitten,[...]. Cancer Res 2009
324
13

More is not always better: finding the right trade-off between affinity and selectivity of a G-quadruplex ligand.
Michela Zuffo, Aurore Guédin, Emma-Dune Leriche, Filippo Doria, Valentina Pirota, Valérie Gabelica, Jean-Louis Mergny, Mauro Freccero. Nucleic Acids Res 2018
34
23

G-quadruplexes in promoters throughout the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2007
807
13

Detection of G-quadruplex DNA in mammalian cells.
Alexander Henderson, Yuliang Wu, Yu Chuan Huang, Elizabeth A Chavez, Jesse Platt, F Brad Johnson, Robert M Brosh, Dipankar Sen, Peter M Lansdorp. Nucleic Acids Res 2014
275
13

The interactions between a small molecule and G-quadruplexes are visualized by fluorescence lifetime imaging microscopy.
Arun Shivalingam, M Angeles Izquierdo, Alix Le Marois, Aurimas Vyšniauskas, Klaus Suhling, Marina K Kuimova, Ramon Vilar. Nat Commun 2015
103
13

DNA tetraplex formation in the control region of c-myc.
T Simonsson, P Pecinka, M Kubista. Nucleic Acids Res 1998
455
13

Anticancer activity and cellular repression of c-MYC by the G-quadruplex-stabilizing 11-piperazinylquindoline is not dependent on direct targeting of the G-quadruplex in the c-MYC promoter.
Peda V L Boddupally, Seongmin Hahn, Cristina Beman, Biswanath De, Tracy A Brooks, Vijay Gokhale, Laurence H Hurley. J Med Chem 2012
61
13

Selective recognition of c-MYC Pu22 G-quadruplex by a fluorescent probe.
Qianqian Zhai, Chao Gao, Jieqin Ding, Yashu Zhang, Barira Islam, Wenxian Lan, Haitao Hou, Hua Deng, Jun Li, Zhe Hu,[...]. Nucleic Acids Res 2019
28
28

The G-quadruplex-interactive molecule BRACO-19 inhibits tumor growth, consistent with telomere targeting and interference with telomerase function.
Angelika M Burger, Fangping Dai, Christoph M Schultes, Anthony P Reszka, Michael J Moore, John A Double, Stephen Neidle. Cancer Res 2005
368
13



G-quadruplexes and G-quadruplex ligands: targets and tools in antiviral therapy.
Emanuela Ruggiero, Sara N Richter. Nucleic Acids Res 2018
140
13

Transcriptional amplification in tumor cells with elevated c-Myc.
Charles Y Lin, Jakob Lovén, Peter B Rahl, Ronald M Paranal, Christopher B Burge, James E Bradner, Tong Ihn Lee, Richard A Young. Cell 2012
887
11

A New G-Quadruplex with Hairpin Loop Immediately Upstream of the Human BCL2 P1 Promoter Modulates Transcription.
Buket Onel, Megan Carver, Guanhui Wu, Daria Timonina, Salil Kalarn, Marti Larriva, Danzhou Yang. J Am Chem Soc 2016
59
11

Putative DNA quadruplex formation within the human c-kit oncogene.
Sarah Rankin, Anthony P Reszka, Julian Huppert, Mire Zloh, Gary N Parkinson, Alan K Todd, Sylvain Ladame, Shankar Balasubramanian, Stephen Neidle. J Am Chem Soc 2005
406
11

5'-UTR RNA G-quadruplexes: translation regulation and targeting.
Anthony Bugaut, Shankar Balasubramanian. Nucleic Acids Res 2012
392
11

Structural basis for telomeric G-quadruplex targeting by naphthalene diimide ligands.
Gavin W Collie, Rossella Promontorio, Sonja M Hampel, Marialuisa Micco, Stephen Neidle, Gary N Parkinson. J Am Chem Soc 2012
147
11

Targeting Multiple Effector Pathways in Pancreatic Ductal Adenocarcinoma with a G-Quadruplex-Binding Small Molecule.
Chiara Marchetti, Katherine G Zyner, Stephan A Ohnmacht, Mathew Robson, Shozeb M Haider, Jennifer P Morton, Giovanni Marsico, Tam Vo, Sarah Laughlin-Toth, Ahmed A Ahmed,[...]. J Med Chem 2018
55
12

Identification and characterization of nucleolin as a c-myc G-quadruplex-binding protein.
Verónica González, Kexiao Guo, Laurence Hurley, Daekyu Sun. J Biol Chem 2009
187
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.