A citation-based method for searching scientific literature

Anisha Shakya, John T King. Biophys J 2018
Times Cited: 35







List of co-cited articles
263 articles co-cited >1



Times Cited
  Times     Co-cited
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Oligonucleotide-Peptide Complexes: Phase Control by Hybridization.
Jeffrey R Vieregg, Michael Lueckheide, Amanda B Marciel, Lorraine Leon, Alex J Bologna, Josean Reyes Rivera, Matthew V Tirrell. J Am Chem Soc 2018
76
48

Biomolecular condensates: organizers of cellular biochemistry.
Salman F Banani, Hyun O Lee, Anthony A Hyman, Michael K Rosen. Nat Rev Mol Cell Biol 2017
40

Membraneless organelles can melt nucleic acid duplexes and act as biomolecular filters.
Timothy J Nott, Timothy D Craggs, Andrew J Baldwin. Nat Chem 2016
184
31

Liquid phase condensation in cell physiology and disease.
Yongdae Shin, Clifford P Brangwynne. Science 2017
28

Germline P granules are liquid droplets that localize by controlled dissolution/condensation.
Clifford P Brangwynne, Christian R Eckmann, David S Courson, Agata Rybarska, Carsten Hoege, Jöbin Gharakhani, Frank Jülicher, Anthony A Hyman. Science 2009
28

Phase separation drives heterochromatin domain formation.
Amy R Strom, Alexander V Emelyanov, Mustafa Mir, Dmitry V Fyodorov, Xavier Darzacq, Gary H Karpen. Nature 2017
862
25

The disordered P granule protein LAF-1 drives phase separation into droplets with tunable viscosity and dynamics.
Shana Elbaum-Garfinkle, Younghoon Kim, Krzysztof Szczepaniak, Carlos Chih-Hsiung Chen, Christian R Eckmann, Sua Myong, Clifford P Brangwynne. Proc Natl Acad Sci U S A 2015
583
25

Protein Phase Separation: A New Phase in Cell Biology.
Steven Boeynaems, Simon Alberti, Nicolas L Fawzi, Tanja Mittag, Magdalini Polymenidou, Frederic Rousseau, Joost Schymkowitz, James Shorter, Benjamin Wolozin, Ludo Van Den Bosch,[...]. Trends Cell Biol 2018
805
25

Template-directed RNA polymerization and enhanced ribozyme catalysis inside membraneless compartments formed by coacervates.
Raghav R Poudyal, Rebecca M Guth-Metzler, Andrew J Veenis, Erica A Frankel, Christine D Keating, Philip C Bevilacqua. Nat Commun 2019
93
22

Coexisting Liquid Phases Underlie Nucleolar Subcompartments.
Marina Feric, Nilesh Vaidya, Tyler S Harmon, Diana M Mitrea, Lian Zhu, Tiffany M Richardson, Richard W Kriwacki, Rohit V Pappu, Clifford P Brangwynne. Cell 2016
804
22

Peptide-nucleotide microdroplets as a step towards a membrane-free protocell model.
Shogo Koga, David S Williams, Adam W Perriman, Stephen Mann. Nat Chem 2011
252
22

Physical Principles and Extant Biology Reveal Roles for RNA-Containing Membraneless Compartments in Origins of Life Chemistry.
Raghav R Poudyal, Fatma Pir Cakmak, Christine D Keating, Philip C Bevilacqua. Biochemistry 2018
67
20

ATP as a biological hydrotrope.
Avinash Patel, Liliana Malinovska, Shambaditya Saha, Jie Wang, Simon Alberti, Yamuna Krishnan, Anthony A Hyman. Science 2017
383
20

RNA Controls PolyQ Protein Phase Transitions.
Huaiying Zhang, Shana Elbaum-Garfinkle, Erin M Langdon, Nicole Taylor, Patricia Occhipinti, Andrew A Bridges, Clifford P Brangwynne, Amy S Gladfelter. Mol Cell 2015
388
20

Organization of Chromatin by Intrinsic and Regulated Phase Separation.
Bryan A Gibson, Lynda K Doolittle, Maximillian W G Schneider, Liv E Jensen, Nathan Gamarra, Lisa Henry, Daniel W Gerlich, Sy Redding, Michael K Rosen. Cell 2019
363
20


Liquid-liquid phase separation in biology.
Anthony A Hyman, Christoph A Weber, Frank Jülicher. Annu Rev Cell Dev Biol 2014
17

Spontaneous driving forces give rise to protein-RNA condensates with coexisting phases and complex material properties.
Steven Boeynaems, Alex S Holehouse, Venera Weinhardt, Denes Kovacs, Joris Van Lindt, Carolyn Larabell, Ludo Van Den Bosch, Rhiju Das, Peter S Tompa, Rohit V Pappu,[...]. Proc Natl Acad Sci U S A 2019
176
17

Coactivator condensation at super-enhancers links phase separation and gene control.
Benjamin R Sabari, Alessandra Dall'Agnese, Ann Boija, Isaac A Klein, Eliot L Coffey, Krishna Shrinivas, Brian J Abraham, Nancy M Hannett, Alicia V Zamudio, John C Manteiga,[...]. Science 2018
937
17

Highly disordered histone H1-DNA model complexes and their condensates.
Abigail L Turner, Matthew Watson, Oscar G Wilkins, Laura Cato, Andrew Travers, Jean O Thomas, Katherine Stott. Proc Natl Acad Sci U S A 2018
94
17

RNA phase transitions in repeat expansion disorders.
Ankur Jain, Ronald D Vale. Nature 2017
379
17

Liquid-Liquid Phase Separation of Histone Proteins in Cells: Role in Chromatin Organization.
Anisha Shakya, Seonyoung Park, Neha Rana, John T King. Biophys J 2020
51
17

A Liquid-to-Solid Phase Transition of the ALS Protein FUS Accelerated by Disease Mutation.
Avinash Patel, Hyun O Lee, Louise Jawerth, Shovamayee Maharana, Marcus Jahnel, Marco Y Hein, Stoyno Stoynov, Julia Mahamid, Shambaditya Saha, Titus M Franzmann,[...]. Cell 2015
17

mRNA structure determines specificity of a polyQ-driven phase separation.
Erin M Langdon, Yupeng Qiu, Amirhossein Ghanbari Niaki, Grace A McLaughlin, Chase A Weidmann, Therese M Gerbich, Jean A Smith, John M Crutchley, Christina M Termini, Kevin M Weeks,[...]. Science 2018
263
14

Controlling compartmentalization by non-membrane-bound organelles.
Richard J Wheeler, Anthony A Hyman. Philos Trans R Soc Lond B Biol Sci 2018
77
14

Reentrant Phase Transition Drives Dynamic Substructure Formation in Ribonucleoprotein Droplets.
Priya R Banerjee, Anthony N Milin, Mahdi Muhammad Moosa, Paulo L Onuchic, Ashok A Deniz. Angew Chem Int Ed Engl 2017
173
14

Compartmentalised RNA catalysis in membrane-free coacervate protocells.
Björn Drobot, Juan M Iglesias-Artola, Kristian Le Vay, Viktoria Mayr, Mrityunjoy Kar, Moritz Kreysing, Hannes Mutschler, T-Y Dora Tang. Nat Commun 2018
113
14

Phase transition of a disordered nuage protein generates environmentally responsive membraneless organelles.
Timothy J Nott, Evangelia Petsalaki, Patrick Farber, Dylan Jervis, Eden Fussner, Anne Plochowietz, Timothy D Craggs, David P Bazett-Jones, Tony Pawson, Julie D Forman-Kay,[...]. Mol Cell 2015
864
14

Controllable protein phase separation and modular recruitment to form responsive membraneless organelles.
Benjamin S Schuster, Ellen H Reed, Ranganath Parthasarathy, Craig N Jahnke, Reese M Caldwell, Jessica G Bermudez, Holly Ramage, Matthew C Good, Daniel A Hammer. Nat Commun 2018
151
14

Compositional Control of Phase-Separated Cellular Bodies.
Salman F Banani, Allyson M Rice, William B Peeples, Yuan Lin, Saumya Jain, Roy Parker, Michael K Rosen. Cell 2016
523
14

Residue-by-Residue View of In Vitro FUS Granules that Bind the C-Terminal Domain of RNA Polymerase II.
Kathleen A Burke, Abigail M Janke, Christy L Rhine, Nicolas L Fawzi. Mol Cell 2015
442
14

Phase transitions in the assembly of multivalent signalling proteins.
Pilong Li, Sudeep Banjade, Hui-Chun Cheng, Soyeon Kim, Baoyu Chen, Liang Guo, Marc Llaguno, Javoris V Hollingsworth, David S King, Salman F Banani,[...]. Nature 2012
14

A Phase Separation Model for Transcriptional Control.
Denes Hnisz, Krishna Shrinivas, Richard A Young, Arup K Chakraborty, Phillip A Sharp. Cell 2017
804
14

Phase separation by low complexity domains promotes stress granule assembly and drives pathological fibrillization.
Amandine Molliex, Jamshid Temirov, Jihun Lee, Maura Coughlin, Anderson P Kanagaraj, Hong Joo Kim, Tanja Mittag, J Paul Taylor. Cell 2015
14

Liquid droplet formation by HP1α suggests a role for phase separation in heterochromatin.
Adam G Larson, Daniel Elnatan, Madeline M Keenen, Michael J Trnka, Jonathan B Johnston, Alma L Burlingame, David A Agard, Sy Redding, Geeta J Narlikar. Nature 2017
805
14

A Molecular Grammar Governing the Driving Forces for Phase Separation of Prion-like RNA Binding Proteins.
Jie Wang, Jeong-Mo Choi, Alex S Holehouse, Hyun O Lee, Xiaojie Zhang, Marcus Jahnel, Shovamayee Maharana, Régis Lemaitre, Andrei Pozniakovsky, David Drechsel,[...]. Cell 2018
664
14

Formation of Chromatin Subcompartments by Phase Separation.
Fabian Erdel, Karsten Rippe. Biophys J 2018
162
14

Sequence-based engineering of dynamic functions of micrometer-sized DNA droplets.
Yusuke Sato, Tetsuro Sakamoto, Masahiro Takinoue. Sci Adv 2020
28
17

Liquid-liquid phase separation in artificial cells.
Charles D Crowe, Christine D Keating. Interface Focus 2018
65
11

Rapid RNA exchange in aqueous two-phase system and coacervate droplets.
Tony Z Jia, Christian Hentrich, Jack W Szostak. Orig Life Evol Biosph 2014
61
11

Phosphorylation of the FUS low-complexity domain disrupts phase separation, aggregation, and toxicity.
Zachary Monahan, Veronica H Ryan, Abigail M Janke, Kathleen A Burke, Shannon N Rhoads, Gül H Zerze, Robert O'Meally, Gregory L Dignon, Alexander E Conicella, Wenwei Zheng,[...]. EMBO J 2017
337
11

Chirality-selected phase behaviour in ionic polypeptide complexes.
Sarah L Perry, Lorraine Leon, Kyle Q Hoffmann, Matthew J Kade, Dimitrios Priftis, Katie A Black, Derek Wong, Ryan A Klein, Charles F Pierce, Khatcher O Margossian,[...]. Nat Commun 2015
100
11

RNA-Based Coacervates as a Model for Membraneless Organelles: Formation, Properties, and Interfacial Liposome Assembly.
William M Aumiller, Fatma Pir Cakmak, Bradley W Davis, Christine D Keating. Langmuir 2016
124
11

Polyamine/Nucleotide Coacervates Provide Strong Compartmentalization of Mg²⁺, Nucleotides, and RNA.
Erica A Frankel, Philip C Bevilacqua, Christine D Keating. Langmuir 2016
67
11

Biomolecular Chemistry in Liquid Phase Separated Compartments.
Karina K Nakashima, Mahesh A Vibhute, Evan Spruijt. Front Mol Biosci 2019
66
11

Different Material States of Pub1 Condensates Define Distinct Modes of Stress Adaptation and Recovery.
Sonja Kroschwald, Matthias C Munder, Shovamayee Maharana, Titus M Franzmann, Doris Richter, Martine Ruer, Anthony A Hyman, Simon Alberti. Cell Rep 2018
104
11

Pi-Pi contacts are an overlooked protein feature relevant to phase separation.
Robert McCoy Vernon, Paul Andrew Chong, Brian Tsang, Tae Hun Kim, Alaji Bah, Patrick Farber, Hong Lin, Julie Deborah Forman-Kay. Elife 2018
293
11

ALS Mutations Disrupt Phase Separation Mediated by α-Helical Structure in the TDP-43 Low-Complexity C-Terminal Domain.
Alexander E Conicella, Gül H Zerze, Jeetain Mittal, Nicolas L Fawzi. Structure 2016
388
11

Sequence determinants of protein phase behavior from a coarse-grained model.
Gregory L Dignon, Wenwei Zheng, Young C Kim, Robert B Best, Jeetain Mittal. PLoS Comput Biol 2018
168
11

RNA buffers the phase separation behavior of prion-like RNA binding proteins.
Shovamayee Maharana, Jie Wang, Dimitrios K Papadopoulos, Doris Richter, Andrey Pozniakovsky, Ina Poser, Marc Bickle, Sandra Rizk, Jordina Guillén-Boixet, Titus M Franzmann,[...]. Science 2018
477
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.