A citation-based method for searching scientific literature

Jonathan S Marvin, Benjamin Scholl, Daniel E Wilson, Kaspar Podgorski, Abbas Kazemipour, Johannes Alexander Müller, Susanne Schoch, Francisco José Urra Quiroz, Nelson Rebola, Huan Bao, Justin P Little, Ariana N Tkachuk, Edward Cai, Adam W Hantman, Samuel S-H Wang, Victor J DePiero, Bart G Borghuis, Edwin R Chapman, Dirk Dietrich, David A DiGregorio, David Fitzpatrick, Loren L Looger. Nat Methods 2018
Times Cited: 136







List of co-cited articles
1045 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


An optimized fluorescent probe for visualizing glutamate neurotransmission.
Jonathan S Marvin, Bart G Borghuis, Lin Tian, Joseph Cichon, Mark T Harnett, Jasper Akerboom, Andrew Gordus, Sabine L Renninger, Tsai-Wen Chen, Cornelia I Bargmann,[...]. Nat Methods 2013
488
46

A genetically encoded fluorescent sensor for in vivo imaging of GABA.
Jonathan S Marvin, Yoshiteru Shimoda, Vincent Magloire, Marco Leite, Takashi Kawashima, Thomas P Jensen, Ilya Kolb, Erika L Knott, Ondrej Novak, Kaspar Podgorski,[...]. Nat Methods 2019
113
34

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
31

A Genetically Encoded Fluorescent Sensor Enables Rapid and Specific Detection of Dopamine in Flies, Fish, and Mice.
Fangmiao Sun, Jianzhi Zeng, Miao Jing, Jingheng Zhou, Jiesi Feng, Scott F Owen, Yichen Luo, Funing Li, Huan Wang, Takashi Yamaguchi,[...]. Cell 2018
251
30

Ultrafast neuronal imaging of dopamine dynamics with designed genetically encoded sensors.
Tommaso Patriarchi, Jounhong Ryan Cho, Katharina Merten, Mark W Howe, Aaron Marley, Wei-Hong Xiong, Robert W Folk, Gerard Joey Broussard, Ruqiang Liang, Min Jee Jang,[...]. Science 2018
329
29

High-performance calcium sensors for imaging activity in neuronal populations and microcompartments.
Hod Dana, Yi Sun, Boaz Mohar, Brad K Hulse, Aaron M Kerlin, Jeremy P Hasseman, Getahun Tsegaye, Arthur Tsang, Allan Wong, Ronak Patel,[...]. Nat Methods 2019
264
25

Ultrafast glutamate sensors resolve high-frequency release at Schaffer collateral synapses.
Nordine Helassa, Céline D Dürst, Catherine Coates, Silke Kerruth, Urwa Arif, Christian Schulze, J Simon Wiegert, Michael Geeves, Thomas G Oertner, Katalin Török. Proc Natl Acad Sci U S A 2018
68
33

A Genetically Encoded Fluorescent Sensor for Rapid and Specific In Vivo Detection of Norepinephrine.
Jiesi Feng, Changmei Zhang, Julieta E Lischinsky, Miao Jing, Jingheng Zhou, Huan Wang, Yajun Zhang, Ao Dong, Zhaofa Wu, Hao Wu,[...]. Neuron 2019
128
23

A genetically encoded fluorescent acetylcholine indicator for in vitro and in vivo studies.
Miao Jing, Peng Zhang, Guangfu Wang, Jiesi Feng, Lukas Mesik, Jianzhi Zeng, Huoqing Jiang, Shaohua Wang, Jess C Looby, Nick A Guagliardo,[...]. Nat Biotechnol 2018
133
21

Sensitive red protein calcium indicators for imaging neural activity.
Hod Dana, Boaz Mohar, Yi Sun, Sujatha Narayan, Andrew Gordus, Jeremy P Hasseman, Getahun Tsegaye, Graham T Holt, Amy Hu, Deepika Walpita,[...]. Elife 2016
411
20

Ultrafast Two-Photon Imaging of a High-Gain Voltage Indicator in Awake Behaving Mice.
Vincent Villette, Mariya Chavarha, Ivan K Dimov, Jonathan Bradley, Lagnajeet Pradhan, Benjamin Mathieu, Stephen W Evans, Simon Chamberland, Dongqing Shi, Renzhi Yang,[...]. Cell 2019
96
15

A genetically encoded single-wavelength sensor for imaging cytosolic and cell surface ATP.
Mark A Lobas, Rongkun Tao, Jun Nagai, Mira T Kronschläger, Philip M Borden, Jonathan S Marvin, Loren L Looger, Baljit S Khakh. Nat Commun 2019
89
16

Genetically encoded indicators of neuronal activity.
Michael Z Lin, Mark J Schnitzer. Nat Neurosci 2016
309
14

Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators.
Lin Tian, S Andrew Hires, Tianyi Mao, Daniel Huber, M Eugenia Chiappe, Sreekanth H Chalasani, Leopoldo Petreanu, Jasper Akerboom, Sean A McKinney, Eric R Schreiter,[...]. Nat Methods 2009
13

Kilohertz frame-rate two-photon tomography.
Abbas Kazemipour, Ondrej Novak, Daniel Flickinger, Jonathan S Marvin, Ahmed S Abdelfattah, Jonathan King, Philip M Borden, Jeong Jun Kim, Sarah H Al-Abdullatif, Parker E Deal,[...]. Nat Methods 2019
57
21

Multiplex imaging relates quantal glutamate release to presynaptic Ca2+ homeostasis at multiple synapses in situ.
Thomas P Jensen, Kaiyu Zheng, Nicholas Cole, Jonathan S Marvin, Loren L Looger, Dmitri A Rusakov. Nat Commun 2019
33
36


Genetically Encoded Glutamate Indicators with Altered Color and Topology.
Jiahui Wu, Ahmed S Abdelfattah, Hang Zhou, Araya Ruangkittisakul, Yong Qian, Klaus Ballanyi, Robert E Campbell. ACS Chem Biol 2018
38
28

An optimized acetylcholine sensor for monitoring in vivo cholinergic activity.
Miao Jing, Yuexuan Li, Jianzhi Zeng, Pengcheng Huang, Miguel Skirzewski, Ornela Kljakic, Wanling Peng, Tongrui Qian, Ke Tan, Jing Zou,[...]. Nat Methods 2020
50
22

Next-generation GRAB sensors for monitoring dopaminergic activity in vivo.
Fangmiao Sun, Jingheng Zhou, Bing Dai, Tongrui Qian, Jianzhi Zeng, Xuelin Li, Yizhou Zhuo, Yajun Zhang, Yipan Wang, Cheng Qian,[...]. Nat Methods 2020
56
19

Effects of fluorescent glutamate indicators on neurotransmitter diffusion and uptake.
Moritz Armbruster, Chris G Dulla, Jeffrey S Diamond. Elife 2020
24
41

An expanded palette of dopamine sensors for multiplex imaging in vivo.
Tommaso Patriarchi, Ali Mohebi, Junqing Sun, Aaron Marley, Ruqiang Liang, Chunyang Dong, Kyle Puhger, Grace Or Mizuno, Carolyn M Davis, Brian Wiltgen,[...]. Nat Methods 2020
40
25

Detection of glutamate release from neurons by genetically encoded surface-displayed FRET nanosensors.
Sakiko Okumoto, Loren L Looger, Kristina D Micheva, Richard J Reimer, Stephen J Smith, Wolf B Frommer. Proc Natl Acad Sci U S A 2005
247
9

Transgenic mice for intersectional targeting of neural sensors and effectors with high specificity and performance.
Linda Madisen, Aleena R Garner, Daisuke Shimaoka, Amy S Chuong, Nathan C Klapoetke, Lu Li, Alexander van der Bourg, Yusuke Niino, Ladan Egolf, Claudio Monetti,[...]. Neuron 2015
517
9

Rational Engineering of XCaMPs, a Multicolor GECI Suite for In Vivo Imaging of Complex Brain Circuit Dynamics.
Masatoshi Inoue, Atsuya Takeuchi, Satoshi Manita, Shin-Ichiro Horigane, Masayuki Sakamoto, Ryosuke Kawakami, Kazushi Yamaguchi, Kouhei Otomo, Hiroyuki Yokoyama, Ryang Kim,[...]. Cell 2019
87
10

Determining the pharmacokinetics of nicotinic drugs in the endoplasmic reticulum using biosensors.
Amol V Shivange, Philip M Borden, Anand K Muthusamy, Aaron L Nichols, Kallol Bera, Huan Bao, Ishak Bishara, Janice Jeon, Matthew J Mulcahy, Bruce Cohen,[...]. J Gen Physiol 2019
24
37

Optimization of a GCaMP calcium indicator for neural activity imaging.
Jasper Akerboom, Tsai-Wen Chen, Trevor J Wardill, Lin Tian, Jonathan S Marvin, Sevinç Mutlu, Nicole Carreras Calderón, Federico Esposti, Bart G Borghuis, Xiaonan Richard Sun,[...]. J Neurosci 2012
737
8

Bright and photostable chemigenetic indicators for extended in vivo voltage imaging.
Ahmed S Abdelfattah, Takashi Kawashima, Amrita Singh, Ondrej Novak, Hui Liu, Yichun Shuai, Yi-Chieh Huang, Luke Campagnola, Stephanie C Seeman, Jianing Yu,[...]. Science 2019
153
8

In vivo measurement of afferent activity with axon-specific calcium imaging.
Gerard Joey Broussard, Yajie Liang, Marina Fridman, Elizabeth K Unger, Guanghan Meng, Xian Xiao, Na Ji, Leopoldo Petreanu, Lin Tian. Nat Neurosci 2018
47
17


Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
8

Dissociable dopamine dynamics for learning and motivation.
Ali Mohebi, Jeffrey R Pettibone, Arif A Hamid, Jenny-Marie T Wong, Leah T Vinson, Tommaso Patriarchi, Lin Tian, Robert T Kennedy, Joshua D Berke. Nature 2019
164
8

High-speed imaging of glutamate release with genetically encoded sensors.
Céline D Dürst, J Simon Wiegert, Nordine Helassa, Silke Kerruth, Catherine Coates, Christian Schulze, Michael A Geeves, Katalin Török, Thomas G Oertner. Nat Protoc 2019
17
47

Glutamate Clearance Is Locally Modulated by Presynaptic Neuronal Activity in the Cerebral Cortex.
Moritz Armbruster, Elizabeth Hanson, Chris G Dulla. J Neurosci 2016
66
10

An expanded palette of genetically encoded Ca²⁺ indicators.
Yongxin Zhao, Satoko Araki, Jiahui Wu, Takayuki Teramoto, Yu-Fen Chang, Masahiro Nakano, Ahmed S Abdelfattah, Manabi Fujiwara, Takeshi Ishihara, Takeharu Nagai,[...]. Science 2011
799
7

Population imaging of neural activity in awake behaving mice.
Kiryl D Piatkevich, Seth Bensussen, Hua-An Tseng, Sanaya N Shroff, Violeta Gisselle Lopez-Huerta, Demian Park, Erica E Jung, Or A Shemesh, Christoph Straub, Howard J Gritton,[...]. Nature 2019
84
8

Quantitative in vivo imaging of neuronal glucose concentrations with a genetically encoded fluorescence lifetime sensor.
Carlos Manlio Díaz-García, Carolina Lahmann, Juan Ramón Martínez-François, Binsen Li, Dorothy Koveal, Nidhi Nathwani, Mahia Rahman, Jacob P Keller, Jonathan S Marvin, Loren L Looger,[...]. J Neurosci Res 2019
31
22

Imaging large-scale neural activity with cellular resolution in awake, mobile mice.
Daniel A Dombeck, Anton N Khabbaz, Forrest Collman, Thomas L Adelman, David W Tank. Neuron 2007
642
7


A Suite of Transgenic Driver and Reporter Mouse Lines with Enhanced Brain-Cell-Type Targeting and Functionality.
Tanya L Daigle, Linda Madisen, Travis A Hage, Matthew T Valley, Ulf Knoblich, Rylan S Larsen, Marc M Takeno, Lawrence Huang, Hong Gu, Rachael Larsen,[...]. Cell 2018
212
7

Fast high-resolution miniature two-photon microscopy for brain imaging in freely behaving mice.
Weijian Zong, Runlong Wu, Mingli Li, Yanhui Hu, Yijun Li, Jinghang Li, Hao Rong, Haitao Wu, Yangyang Xu, Yang Lu,[...]. Nat Methods 2017
165
7

Precision Calcium Imaging of Dense Neural Populations via a Cell-Body-Targeted Calcium Indicator.
Or A Shemesh, Changyang Linghu, Kiryl D Piatkevich, Daniel Goodwin, Orhan Tunc Celiker, Howard J Gritton, Michael F Romano, Ruixuan Gao, Chih-Chieh Jay Yu, Hua-An Tseng,[...]. Neuron 2020
21
33

Two-photon laser scanning fluorescence microscopy.
W Denk, J H Strickler, W W Webb. Science 1990
7

Directed Evolution of a Selective and Sensitive Serotonin Sensor via Machine Learning.
Elizabeth K Unger, Jacob P Keller, Michael Altermatt, Ruqiang Liang, Aya Matsui, Chunyang Dong, Olivia J Hon, Zi Yao, Junqing Sun, Samba Banala,[...]. Cell 2020
31
22

Resolution of High-Frequency Mesoscale Intracortical Maps Using the Genetically Encoded Glutamate Sensor iGluSnFR.
Yicheng Xie, Allen W Chan, Alexander McGirr, Songchao Xue, Dongsheng Xiao, Hongkui Zeng, Timothy H Murphy. J Neurosci 2016
53
11

Mapping synaptic glutamate transporter dysfunction in vivo to regions surrounding Aβ plaques by iGluSnFR two-photon imaging.
J K Hefendehl, J LeDue, R W Y Ko, J Mahler, T H Murphy, B A MacVicar. Nat Commun 2016
65
9

Real-time imaging of glutamate clearance reveals normal striatal uptake in Huntington disease mouse models.
Matthew P Parsons, Matthieu P Vanni, Cameron L Woodard, Rujun Kang, Timothy H Murphy, Lynn A Raymond. Nat Commun 2016
59
10

Red fluorescent protein-based cAMP indicator applicable to optogenetics and in vivo imaging.
Kazuki Harada, Motoki Ito, Xiaowen Wang, Mika Tanaka, Devina Wongso, Ayumu Konno, Hirokazu Hirai, Hajime Hirase, Takashi Tsuboi, Tetsuya Kitaguchi. Sci Rep 2017
60
10

Measurement of the millisecond activation switch of G protein-coupled receptors in living cells.
Jean-Pierre Vilardaga, Moritz Bünemann, Cornelius Krasel, Mariàn Castro, Martin J Lohse. Nat Biotechnol 2003
323
6

A genetically encoded near-infrared fluorescent calcium ion indicator.
Yong Qian, Kiryl D Piatkevich, Benedict Mc Larney, Ahmed S Abdelfattah, Sohum Mehta, Mitchell H Murdock, Sven Gottschalk, Rosana S Molina, Wei Zhang, Yingche Chen,[...]. Nat Methods 2019
75
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.