A citation-based method for searching scientific literature

Carla Schmidt, Michael Pacher, Holger Puchta. Methods Mol Biol 2019
Times Cited: 20







List of co-cited articles
165 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.
Martin Jinek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer A Doudna, Emmanuelle Charpentier. Science 2012
60


Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage.
Alexis C Komor, Yongjoo B Kim, Michael S Packer, John A Zuris, David R Liu. Nature 2016
30

Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system.
Bernd Zetsche, Jonathan S Gootenberg, Omar O Abudayyeh, Ian M Slaymaker, Kira S Makarova, Patrick Essletzbichler, Sara E Volz, Julia Joung, John van der Oost, Aviv Regev,[...]. Cell 2015
25


DNA damage and repair in plants - from models to crops.
Vasilissa Manova, Damian Gruszka. Front Plant Sci 2015
138
20

Genome-Scale Sequence Disruption Following Biolistic Transformation in Rice and Maize.
Jianing Liu, Natalie J Nannas, Fang-Fang Fu, Jinghua Shi, Brooke Aspinwall, Wayne A Parrott, R Kelly Dawe. Plant Cell 2019
55
20

Genome editing. The new frontier of genome engineering with CRISPR-Cas9.
Jennifer A Doudna, Emmanuelle Charpentier. Science 2014
20

Efficient in planta gene targeting in tomato using geminiviral replicons and the CRISPR/Cas9 system.
Tal Dahan-Meir, Shdema Filler-Hayut, Cathy Melamed-Bessudo, Samuel Bocobza, Henryk Czosnek, Asaph Aharoni, Avraham A Levy. Plant J 2018
101
20

Agrobacterium T-DNA integration in somatic cells does not require the activity of DNA polymerase θ.
Ayako Nishizawa-Yokoi, Hiroaki Saika, Naho Hara, Lan-Ying Lee, Seiichi Toki, Stanton B Gelvin. New Phytol 2021
19
21

A CRISPR/Cas9 Toolbox for Multiplexed Plant Genome Editing and Transcriptional Regulation.
Levi G Lowder, Dengwei Zhang, Nicholas J Baltes, Joseph W Paul, Xu Tang, Xuelian Zheng, Daniel F Voytas, Tzung-Fu Hsieh, Yong Zhang, Yiping Qi. Plant Physiol 2015
312
15

Towards CRISPR/Cas crops - bringing together genomics and genome editing.
Armin Scheben, Felix Wolter, Jacqueline Batley, Holger Puchta, David Edwards. New Phytol 2017
104
15

RNA-guided transcriptional regulation in planta via synthetic dCas9-based transcription factors.
Agnieszka Piatek, Zahir Ali, Hatoon Baazim, Lixin Li, Aala Abulfaraj, Sahar Al-Shareef, Mustapha Aouida, Magdy M Mahfouz. Plant Biotechnol J 2015
194
15

High-frequency, precise modification of the tomato genome.
Tomáš Čermák, Nicholas J Baltes, Radim Čegan, Yong Zhang, Daniel F Voytas. Genome Biol 2015
278
15

Precise base editing in rice, wheat and maize with a Cas9-cytidine deaminase fusion.
Yuan Zong, Yanpeng Wang, Chao Li, Rui Zhang, Kunling Chen, Yidong Ran, Jin-Long Qiu, Daowen Wang, Caixia Gao. Nat Biotechnol 2017
398
15

Large chromosomal deletions and heritable small genetic changes induced by CRISPR/Cas9 in rice.
Huanbin Zhou, Bo Liu, Donald P Weeks, Martin H Spalding, Bing Yang. Nucleic Acids Res 2014
293
15

CRISPR-Cas9 Structures and Mechanisms.
Fuguo Jiang, Jennifer A Doudna. Annu Rev Biophys 2017
731
15

Efficient DNA-free genome editing of bread wheat using CRISPR/Cas9 ribonucleoprotein complexes.
Zhen Liang, Kunling Chen, Tingdong Li, Yi Zhang, Yanpeng Wang, Qian Zhao, Jinxing Liu, Huawei Zhang, Cuimin Liu, Yidong Ran,[...]. Nat Commun 2017
379
15

CRISPR/Cas Genome Editing and Precision Plant Breeding in Agriculture.
Kunling Chen, Yanpeng Wang, Rui Zhang, Huawei Zhang, Caixia Gao. Annu Rev Plant Biol 2019
429
15

Gene Targeting by Homology-Directed Repair in Rice Using a Geminivirus-Based CRISPR/Cas9 System.
Mugui Wang, Yuming Lu, José Ramón Botella, Yanfei Mao, Kai Hua, Jian-Kang Zhu. Mol Plant 2017
107
15


Covalent linkage of the DNA repair template to the CRISPR-Cas9 nuclease enhances homology-directed repair.
Natasa Savic, Femke Cas Ringnalda, Helen Lindsay, Christian Berk, Katja Bargsten, Yizhou Li, Dario Neri, Mark D Robinson, Constance Ciaudo, Jonathan Hall,[...]. Elife 2018
95
15

CRISPR/Cas9-Mediated Immunity to Geminiviruses: Differential Interference and Evasion.
Zahir Ali, Shakila Ali, Manal Tashkandi, Syed Shan-E-Ali Zaidi, Magdy M Mahfouz. Sci Rep 2016
117
15

Increasing Cas9-mediated homology-directed repair efficiency through covalent tethering of DNA repair template.
Eric J Aird, Klaus N Lovendahl, Amber St Martin, Reuben S Harris, Wendy R Gordon. Commun Biol 2018
131
15

Efficient Virus-Mediated Genome Editing in Plants Using the CRISPR/Cas9 System.
Zahir Ali, Aala Abul-faraj, Lixin Li, Neha Ghosh, Marek Piatek, Ali Mahjoub, Mustapha Aouida, Agnieszka Piatek, Nicholas J Baltes, Daniel F Voytas,[...]. Mol Plant 2015
162
15

CRISPR/Cas9-mediated viral interference in plants.
Zahir Ali, Aala Abulfaraj, Ali Idris, Shakila Ali, Manal Tashkandi, Magdy M Mahfouz. Genome Biol 2015
188
15

Engineering canker-resistant plants through CRISPR/Cas9-targeted editing of the susceptibility gene CsLOB1 promoter in citrus.
Aihong Peng, Shanchun Chen, Tiangang Lei, Lanzhen Xu, Yongrui He, Liu Wu, Lixiao Yao, Xiuping Zou. Plant Biotechnol J 2017
216
15

Search-and-replace genome editing without double-strand breaks or donor DNA.
Andrew V Anzalone, Peyton B Randolph, Jessie R Davis, Alexander A Sousa, Luke W Koblan, Jonathan M Levy, Peter J Chen, Christopher Wilson, Gregory A Newby, Aditya Raguram,[...]. Nature 2019
15

Engineering Quantitative Trait Variation for Crop Improvement by Genome Editing.
Daniel Rodríguez-Leal, Zachary H Lemmon, Jarrett Man, Madelaine E Bartlett, Zachary B Lippman. Cell 2017
400
15

De novo domestication of wild tomato using genome editing.
Agustin Zsögön, Tomáš Čermák, Emmanuel Rezende Naves, Marcela Morato Notini, Kai H Edel, Stefan Weinl, Luciano Freschi, Daniel F Voytas, Jörg Kudla, Lázaro Eustáquio Pereira Peres. Nat Biotechnol 2018
273
15

Targeted genome modification of crop plants using a CRISPR-Cas system.
Qiwei Shan, Yanpeng Wang, Jun Li, Yi Zhang, Kunling Chen, Zhen Liang, Kang Zhang, Jinxing Liu, Jianzhong Jeff Xi, Jin-Long Qiu,[...]. Nat Biotechnol 2013
947
15

Simultaneous CRISPR/Cas9-mediated editing of cassava eIF4E isoforms nCBP-1 and nCBP-2 reduces cassava brown streak disease symptom severity and incidence.
Michael A Gomez, Z Daniel Lin, Theodore Moll, Raj Deepika Chauhan, Luke Hayden, Kelley Renninger, Getu Beyene, Nigel J Taylor, James C Carrington, Brian J Staskawicz,[...]. Plant Biotechnol J 2019
113
15

Efficient and transgene-free genome editing in wheat through transient expression of CRISPR/Cas9 DNA or RNA.
Yi Zhang, Zhen Liang, Yuan Zong, Yanpeng Wang, Jinxing Liu, Kunling Chen, Jin-Long Qiu, Caixia Gao. Nat Commun 2016
390
15

Development of broad virus resistance in non-transgenic cucumber using CRISPR/Cas9 technology.
Jeyabharathy Chandrasekaran, Marina Brumin, Dalia Wolf, Diana Leibman, Chen Klap, Mali Pearlsman, Amir Sherman, Tzahi Arazi, Amit Gal-On. Mol Plant Pathol 2016
286
15

Linking CRISPR-Cas9 interference in cassava to the evolution of editing-resistant geminiviruses.
Devang Mehta, Alessandra Stürchler, Ravi B Anjanappa, Syed Shan-E-Ali Zaidi, Matthias Hirsch-Hoffmann, Wilhelm Gruissem, Hervé Vanderschuren. Genome Biol 2019
63
15

DNA-free genome editing in plants with preassembled CRISPR-Cas9 ribonucleoproteins.
Je Wook Woo, Jungeun Kim, Soon Il Kwon, Claudia Corvalán, Seung Woo Cho, Hyeran Kim, Sang-Gyu Kim, Sang-Tae Kim, Sunghwa Choe, Jin-Soo Kim. Nat Biotechnol 2015
517
15

A Multipurpose Toolkit to Enable Advanced Genome Engineering in Plants.
Tomáš Čermák, Shaun J Curtin, Javier Gil-Humanes, Radim Čegan, Thomas J Y Kono, Eva Konečná, Joseph J Belanto, Colby G Starker, Jade W Mathre, Rebecca L Greenstein,[...]. Plant Cell 2017
268
15

In planta gene targeting.
Friedrich Fauser, Nadine Roth, Michael Pacher, Gabriele Ilg, Rocío Sánchez-Fernández, Christian Biesgen, Holger Puchta. Proc Natl Acad Sci U S A 2012
127
15

T-DNA integration in plants results from polymerase-θ-mediated DNA repair.
Maartje van Kregten, Sylvia de Pater, Ron Romeijn, Robin van Schendel, Paul J J Hooykaas, Marcel Tijsterman. Nat Plants 2016
87
15


Applications of CRISPR-Cas in agriculture and plant biotechnology.
Haocheng Zhu, Chao Li, Caixia Gao. Nat Rev Mol Cell Biol 2020
188
15

Geminivirus-Mediated Genome Editing in Potato (Solanum tuberosum L.) Using Sequence-Specific Nucleases.
Nathaniel M Butler, Nicholas J Baltes, Daniel F Voytas, David S Douches. Front Plant Sci 2016
122
15

Fusion of the Cas9 endonuclease and the VirD2 relaxase facilitates homology-directed repair for precise genome engineering in rice.
Zahir Ali, Ashwag Shami, Khalid Sedeek, Radwa Kamel, Abdulrahman Alhabsi, Muhammad Tehseen, Norhan Hassan, Haroon Butt, Ahad Kababji, Samir M Hamdan,[...]. Commun Biol 2020
43
15

Programmable base editing of A•T to G•C in genomic DNA without DNA cleavage.
Nicole M Gaudelli, Alexis C Komor, Holly A Rees, Michael S Packer, Ahmed H Badran, David I Bryson, David R Liu. Nature 2017
15

Repairing breaks in the plant genome: the importance of keeping it together.
Wanda M Waterworth, Georgina E Drury, Clifford M Bray, Christopher E West. New Phytol 2011
108
10

Targeted base editing in rice and tomato using a CRISPR-Cas9 cytidine deaminase fusion.
Zenpei Shimatani, Sachiko Kashojiya, Mariko Takayama, Rie Terada, Takayuki Arazoe, Hisaki Ishii, Hiroshi Teramura, Tsuyoshi Yamamoto, Hiroki Komatsu, Kenji Miura,[...]. Nat Biotechnol 2017
349
10

Precise A·T to G·C Base Editing in the Rice Genome.
Kai Hua, Xiaoping Tao, Fengtong Yuan, Dong Wang, Jian-Kang Zhu. Mol Plant 2018
113
10

A potent Cas9-derived gene activator for plant and mammalian cells.
Zhenxiang Li, Dandan Zhang, Xiangyu Xiong, Bingyu Yan, Wei Xie, Jen Sheen, Jian-Feng Li. Nat Plants 2017
105
10

The Biology of CRISPR-Cas: Backward and Forward.
Frank Hille, Hagen Richter, Shi Pey Wong, Majda Bratovič, Sarah Ressel, Emmanuelle Charpentier. Cell 2018
386
10

Genome-wide Targeted Mutagenesis in Rice Using the CRISPR/Cas9 System.
Yuming Lu, Xiao Ye, Renming Guo, Jing Huang, Wei Wang, Jiuyou Tang, Longtao Tan, Jian-Kang Zhu, Chengcai Chu, Yangwen Qian. Mol Plant 2017
133
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.