A citation-based method for searching scientific literature

Rui Lin, Ruiyu Wang, Jing Yuan, Qiru Feng, Youtong Zhou, Shaoqun Zeng, Miao Ren, Siqi Jiang, Hong Ni, Can Zhou, Hui Gong, Minmin Luo. Nat Methods 2018
Times Cited: 34







List of co-cited articles
270 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


High-throughput dual-colour precision imaging for brain-wide connectome with cytoarchitectonic landmarks at the cellular level.
Hui Gong, Dongli Xu, Jing Yuan, Xiangning Li, Congdi Guo, Jie Peng, Yuxin Li, Lindsay A Schwarz, Anan Li, Bihe Hu,[...]. Nat Commun 2016
98
32

A platform for brain-wide imaging and reconstruction of individual neurons.
Michael N Economo, Nathan G Clack, Luke D Lavis, Charles R Gerfen, Karel Svoboda, Eugene W Myers, Jayaram Chandrashekar. Elife 2016
169
26

A Designer AAV Variant Permits Efficient Retrograde Access to Projection Neurons.
D Gowanlock R Tervo, Bum-Yeol Hwang, Sarada Viswanathan, Thomas Gaj, Maria Lavzin, Kimberly D Ritola, Sarah Lindo, Susan Michael, Elena Kuleshova, David Ojala,[...]. Neuron 2016
415
26

A mesoscale connectome of the mouse brain.
Seung Wook Oh, Julie A Harris, Lydia Ng, Brent Winslow, Nicholas Cain, Stefan Mihalas, Quanxin Wang, Chris Lau, Leonard Kuan, Alex M Henry,[...]. Nature 2014
988
23

The logic of single-cell projections from visual cortex.
Yunyun Han, Justus M Kebschull, Robert A A Campbell, Devon Cowan, Fabia Imhof, Anthony M Zador, Thomas D Mrsic-Flogel. Nature 2018
103
17

Transgenic strategies for combinatorial expression of fluorescent proteins in the nervous system.
Jean Livet, Tamily A Weissman, Hyuno Kang, Ryan W Draft, Ju Lu, Robyn A Bennis, Joshua R Sanes, Jeff W Lichtman. Nature 2007
17

Reconstruction of 1,000 Projection Neurons Reveals New Cell Types and Organization of Long-Range Connectivity in the Mouse Brain.
Johan Winnubst, Erhan Bas, Tiago A Ferreira, Zhuhao Wu, Michael N Economo, Patrick Edson, Ben J Arthur, Christopher Bruns, Konrad Rokicki, David Schauder,[...]. Cell 2019
85
17

Improved tools for the Brainbow toolbox.
Dawen Cai, Kimberly B Cohen, Tuanlian Luo, Jeff W Lichtman, Joshua R Sanes. Nat Methods 2013
226
14

Micro-optical sectioning tomography to obtain a high-resolution atlas of the mouse brain.
Anan Li, Hui Gong, Bin Zhang, Qingdi Wang, Cheng Yan, Jingpeng Wu, Qian Liu, Shaoqun Zeng, Qingming Luo. Science 2010
219
14

Neuroanatomy goes viral!
Jonathan J Nassi, Constance L Cepko, Richard T Born, Kevin T Beier. Front Neuroanat 2015
95
14

Distinct descending motor cortex pathways and their roles in movement.
Michael N Economo, Sarada Viswanathan, Bosiljka Tasic, Erhan Bas, Johan Winnubst, Vilas Menon, Lucas T Graybuck, Thuc Nghi Nguyen, Kimberly A Smith, Zizhen Yao,[...]. Nature 2018
99
14

Targeting cells with single vectors using multiple-feature Boolean logic.
Lief E Fenno, Joanna Mattis, Charu Ramakrishnan, Minsuk Hyun, Soo Yeun Lee, Miao He, Jason Tucciarone, Aslihan Selimbeyoglu, Andre Berndt, Logan Grosenick,[...]. Nat Methods 2014
214
14

Structural and molecular interrogation of intact biological systems.
Kwanghun Chung, Jenelle Wallace, Sung-Yon Kim, Sandhiya Kalyanasundaram, Aaron S Andalman, Thomas J Davidson, Julie J Mirzabekov, Kelly A Zalocusky, Joanna Mattis, Aleksandra K Denisin,[...]. Nature 2013
14

Mapping of Brain Activity by Automated Volume Analysis of Immediate Early Genes.
Nicolas Renier, Eliza L Adams, Christoph Kirst, Zhuhao Wu, Ricardo Azevedo, Johannes Kohl, Anita E Autry, Lolahon Kadiri, Kannan Umadevi Venkataraju, Yu Zhou,[...]. Cell 2016
271
14

Generation of a whole-brain atlas for the cholinergic system and mesoscopic projectome analysis of basal forebrain cholinergic neurons.
Xiangning Li, Bin Yu, Qingtao Sun, Yalun Zhang, Miao Ren, Xiaoyan Zhang, Anan Li, Jing Yuan, Linda Madisen, Qingming Luo,[...]. Proc Natl Acad Sci U S A 2018
83
14

Whole-brain imaging with single-cell resolution using chemical cocktails and computational analysis.
Etsuo A Susaki, Kazuki Tainaka, Dimitri Perrin, Fumiaki Kishino, Takehiro Tawara, Tomonobu M Watanabe, Chihiro Yokoyama, Hirotaka Onoe, Megumi Eguchi, Shun Yamaguchi,[...]. Cell 2014
609
14

Genetic Dissection of Neural Circuits: A Decade of Progress.
Liqun Luo, Edward M Callaway, Karel Svoboda. Neuron 2018
122
14

Single-cell phenotyping within transparent intact tissue through whole-body clearing.
Bin Yang, Jennifer B Treweek, Rajan P Kulkarni, Benjamin E Deverman, Chun-Kan Chen, Eric Lubeck, Sheel Shah, Long Cai, Viviana Gradinaru. Cell 2014
502
14

TDat: An Efficient Platform for Processing Petabyte-Scale Whole-Brain Volumetric Images.
Yuxin Li, Hui Gong, Xiaoquan Yang, Jing Yuan, Tao Jiang, Xiangning Li, Qingtao Sun, Dan Zhu, Zhenyu Wang, Qingming Luo,[...]. Front Neural Circuits 2017
20
25

Engineered AAVs for efficient noninvasive gene delivery to the central and peripheral nervous systems.
Ken Y Chan, Min J Jang, Bryan B Yoo, Alon Greenbaum, Namita Ravi, Wei-Li Wu, Luis Sánchez-Guardado, Carlos Lois, Sarkis K Mazmanian, Benjamin E Deverman,[...]. Nat Neurosci 2017
319
14

Serial two-photon tomography for automated ex vivo mouse brain imaging.
Timothy Ragan, Lolahon R Kadiri, Kannan Umadevi Venkataraju, Karsten Bahlmann, Jason Sutin, Julian Taranda, Ignacio Arganda-Carreras, Yongsoo Kim, H Sebastian Seung, Pavel Osten. Nat Methods 2012
301
11

Mapping brain circuitry with a light microscope.
Pavel Osten, Troy W Margrie. Nat Methods 2013
129
11


Ultramicroscopy: three-dimensional visualization of neuronal networks in the whole mouse brain.
Hans-Ulrich Dodt, Ulrich Leischner, Anja Schierloh, Nina Jährling, Christoph Peter Mauch, Katrin Deininger, Jan Michael Deussing, Matthias Eder, Walter Zieglgänsberger, Klaus Becker. Nat Methods 2007
663
11

Anterograde or retrograde transsynaptic labeling of CNS neurons with vesicular stomatitis virus vectors.
Kevin T Beier, Arpiar Saunders, Ian A Oldenburg, Kazunari Miyamichi, Nazia Akhtar, Liqun Luo, Sean P J Whelan, Bernardo Sabatini, Constance L Cepko. Proc Natl Acad Sci U S A 2011
109
11

Advanced CUBIC protocols for whole-brain and whole-body clearing and imaging.
Etsuo A Susaki, Kazuki Tainaka, Dimitri Perrin, Hiroko Yukinaga, Akihiro Kuno, Hiroki R Ueda. Nat Protoc 2015
271
11

A three-dimensional single-cell-resolution whole-brain atlas using CUBIC-X expansion microscopy and tissue clearing.
Tatsuya C Murakami, Tomoyuki Mano, Shu Saikawa, Shuhei A Horiguchi, Daichi Shigeta, Kousuke Baba, Hiroshi Sekiya, Yoshihiro Shimizu, Kenji F Tanaka, Hiroshi Kiyonari,[...]. Nat Neurosci 2018
95
11

FDISCO: Advanced solvent-based clearing method for imaging whole organs.
Yisong Qi, Tingting Yu, Jianyi Xu, Peng Wan, Yilin Ma, Jingtan Zhu, Yusha Li, Hui Gong, Qingming Luo, Dan Zhu. Sci Adv 2019
56
11

Whole-body imaging with single-cell resolution by tissue decolorization.
Kazuki Tainaka, Shimpei I Kubota, Takeru Q Suyama, Etsuo A Susaki, Dimitri Perrin, Maki Ukai-Tadenuma, Hideki Ukai, Hiroki R Ueda. Cell 2014
239
11

Three-dimensional imaging of solvent-cleared organs using 3DISCO.
Ali Ertürk, Klaus Becker, Nina Jährling, Christoph P Mauch, Caroline D Hojer, Jackson G Egen, Farida Hellal, Frank Bradke, Morgan Sheng, Hans-Ulrich Dodt. Nat Protoc 2012
491
11


iDISCO: a simple, rapid method to immunolabel large tissue samples for volume imaging.
Nicolas Renier, Zhuhao Wu, David J Simon, Jing Yang, Pablo Ariel, Marc Tessier-Lavigne. Cell 2014
601
11

Scale: a chemical approach for fluorescence imaging and reconstruction of transparent mouse brain.
Hiroshi Hama, Hiroshi Kurokawa, Hiroyuki Kawano, Ryoko Ando, Tomomi Shimogori, Hisayori Noda, Kiyoko Fukami, Asako Sakaue-Sawano, Atsushi Miyawaki. Nat Neurosci 2011
701
11

Shrinkage-mediated imaging of entire organs and organisms using uDISCO.
Chenchen Pan, Ruiyao Cai, Francesca Paola Quacquarelli, Alireza Ghasemigharagoz, Athanasios Lourbopoulos, Paweł Matryba, Nikolaus Plesnila, Martin Dichgans, Farida Hellal, Ali Ertürk. Nat Methods 2016
247
11

Simple, Scalable Proteomic Imaging for High-Dimensional Profiling of Intact Systems.
Evan Murray, Jae Hun Cho, Daniel Goodwin, Taeyun Ku, Justin Swaney, Sung-Yon Kim, Heejin Choi, Young-Gyun Park, Jeong-Yoon Park, Austin Hubbert,[...]. Cell 2015
192
11

Strategies and Tools for Combinatorial Targeting of GABAergic Neurons in Mouse Cerebral Cortex.
Miao He, Jason Tucciarone, SooHyun Lee, Maximiliano José Nigro, Yongsoo Kim, Jesse Maurica Levine, Sean Michael Kelly, Illya Krugikov, Priscilla Wu, Yang Chen,[...]. Neuron 2016
106
11

Viral-genetic tracing of the input-output organization of a central noradrenaline circuit.
Lindsay A Schwarz, Kazunari Miyamichi, Xiaojing J Gao, Kevin T Beier, Brandon Weissbourd, Katherine E DeLoach, Jing Ren, Sandy Ibanes, Robert C Malenka, Eric J Kremer,[...]. Nature 2015
304
11

A whole-brain map of long-range inputs to GABAergic interneurons in the mouse medial prefrontal cortex.
Qingtao Sun, Xiangning Li, Miao Ren, Mengting Zhao, Qiuyuan Zhong, Yuqi Ren, Pan Luo, Hong Ni, Xiaoyu Zhang, Chen Zhang,[...]. Nat Neurosci 2019
42
11

Retrograde neuronal tracing with a deletion-mutant rabies virus.
Ian R Wickersham, Stefan Finke, Karl-Klaus Conzelmann, Edward M Callaway. Nat Methods 2007
387
11

High-Throughput Mapping of Long-Range Neuronal Projection Using In Situ Sequencing.
Xiaoyin Chen, Yu-Chi Sun, Huiqing Zhan, Justus M Kebschull, Stephan Fischer, Katherine Matho, Z Josh Huang, Jesse Gillis, Anthony M Zador. Cell 2019
28
14

Anterograde monosynaptic transneuronal tracers derived from herpes simplex virus 1 strain H129.
Wen-Bo Zeng, Hai-Fei Jiang, Ya-Dong Gang, Yi-Ge Song, Zhang-Zhou Shen, Hong Yang, Xiao Dong, Yong-Lu Tian, Rong-Jun Ni, Yaping Liu,[...]. Mol Neurodegener 2017
43
11

High-Throughput Mapping of Single-Neuron Projections by Sequencing of Barcoded RNA.
Justus M Kebschull, Pedro Garcia da Silva, Ashlan P Reid, Ian D Peikon, Dinu F Albeanu, Anthony M Zador. Neuron 2016
112
11

AAV-Mediated Anterograde Transsynaptic Tagging: Mapping Corticocollicular Input-Defined Neural Pathways for Defense Behaviors.
Brian Zingg, Xiao-Lin Chou, Zheng-Gang Zhang, Lukas Mesik, Feixue Liang, Huizhong Whit Tao, Li I Zhang. Neuron 2017
202
11

Mosaic analysis with double markers in mice.
Hui Zong, J Sebastian Espinosa, Helen Hong Su, Mandar D Muzumdar, Liqun Luo. Cell 2005
351
11

High-Speed and Scalable Whole-Brain Imaging in Rodents and Primates.
Kaoru Seiriki, Atsushi Kasai, Takeshi Hashimoto, Wiebke Schulze, Misaki Niu, Shun Yamaguchi, Takanobu Nakazawa, Ken-Ichi Inoue, Shiori Uezono, Masahiko Takada,[...]. Neuron 2017
42
8

Clarifying Tissue Clearing.
Douglas S Richardson, Jeff W Lichtman. Cell 2015
513
8

Panoptic imaging of transparent mice reveals whole-body neuronal projections and skull-meninges connections.
Ruiyao Cai, Chenchen Pan, Alireza Ghasemigharagoz, Mihail Ivilinov Todorov, Benjamin Förstera, Shan Zhao, Harsharan S Bhatia, Arnaldo Parra-Damas, Leander Mrowka, Delphine Theodorou,[...]. Nat Neurosci 2019
99
8

A half century of experimental neuroanatomical tracing.
José L Lanciego, Floris G Wouterlood. J Chem Neuroanat 2011
120
8

Visible rodent brain-wide networks at single-neuron resolution.
Jing Yuan, Hui Gong, Anan Li, Xiangning Li, Shangbin Chen, Shaoqun Zeng, Qingming Luo. Front Neuroanat 2015
21
14

BigBrain: an ultrahigh-resolution 3D human brain model.
Katrin Amunts, Claude Lepage, Louis Borgeat, Hartmut Mohlberg, Timo Dickscheid, Marc-Étienne Rousseau, Sebastian Bludau, Pierre-Louis Bazin, Lindsay B Lewis, Ana-Maria Oros-Peusquens,[...]. Science 2013
223
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.