Xiuye Chen, Yu Mu, Yu Hu, Aaron T Kuan, Maxim Nikitchenko, Owen Randlett, Alex B Chen, Jeffery P Gavornik, Haim Sompolinsky, Florian Engert, Misha B Ahrens. Neuron 2018
Times Cited: 45
Times Cited: 45
Times Cited
Times Co-cited
Similarity
From Whole-Brain Data to Functional Circuit Models: The Zebrafish Optomotor Response.
Eva A Naumann, James E Fitzgerald, Timothy W Dunn, Jason Rihel, Haim Sompolinsky, Florian Engert. Cell 2016
Eva A Naumann, James E Fitzgerald, Timothy W Dunn, Jason Rihel, Haim Sompolinsky, Florian Engert. Cell 2016
48
Brain-wide neuronal dynamics during motor adaptation in zebrafish.
Misha B Ahrens, Jennifer M Li, Michael B Orger, Drew N Robson, Alexander F Schier, Florian Engert, Ruben Portugues. Nature 2012
Misha B Ahrens, Jennifer M Li, Michael B Orger, Drew N Robson, Alexander F Schier, Florian Engert, Ruben Portugues. Nature 2012
44
Whole-brain activity mapping onto a zebrafish brain atlas.
Owen Randlett, Caroline L Wee, Eva A Naumann, Onyeka Nnaemeka, David Schoppik, James E Fitzgerald, Ruben Portugues, Alix M B Lacoste, Clemens Riegler, Florian Engert,[...]. Nat Methods 2015
Owen Randlett, Caroline L Wee, Eva A Naumann, Onyeka Nnaemeka, David Schoppik, James E Fitzgerald, Ruben Portugues, Alix M B Lacoste, Clemens Riegler, Florian Engert,[...]. Nat Methods 2015
37
Whole-brain functional imaging at cellular resolution using light-sheet microscopy.
Misha B Ahrens, Michael B Orger, Drew N Robson, Jennifer M Li, Philipp J Keller. Nat Methods 2013
Misha B Ahrens, Michael B Orger, Drew N Robson, Jennifer M Li, Philipp J Keller. Nat Methods 2013
37
Whole-brain activity maps reveal stereotyped, distributed networks for visuomotor behavior.
Ruben Portugues, Claudia E Feierstein, Florian Engert, Michael B Orger. Neuron 2014
Ruben Portugues, Claudia E Feierstein, Florian Engert, Michael B Orger. Neuron 2014
33
Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
31
Neural Circuits Underlying Visually Evoked Escapes in Larval Zebrafish.
Timothy W Dunn, Christoph Gebhardt, Eva A Naumann, Clemens Riegler, Misha B Ahrens, Florian Engert, Filippo Del Bene. Neuron 2016
Timothy W Dunn, Christoph Gebhardt, Eva A Naumann, Clemens Riegler, Misha B Ahrens, Florian Engert, Filippo Del Bene. Neuron 2016
26
A Brain-wide Circuit Model of Heat-Evoked Swimming Behavior in Larval Zebrafish.
Martin Haesemeyer, Drew N Robson, Jennifer M Li, Alexander F Schier, Florian Engert. Neuron 2018
Martin Haesemeyer, Drew N Robson, Jennifer M Li, Alexander F Schier, Florian Engert. Neuron 2018
36
Topography of a Visuomotor Transformation.
Thomas O Helmbrecht, Marco Dal Maschio, Joseph C Donovan, Styliani Koutsouli, Herwig Baier. Neuron 2018
Thomas O Helmbrecht, Marco Dal Maschio, Joseph C Donovan, Styliani Koutsouli, Herwig Baier. Neuron 2018
26
Sensorimotor computation underlying phototaxis in zebrafish.
Sébastien Wolf, Alexis M Dubreuil, Tommaso Bertoni, Urs Lucas Böhm, Volker Bormuth, Raphaël Candelier, Sophia Karpenko, David G C Hildebrand, Isaac H Bianco, Rémi Monasson,[...]. Nat Commun 2017
Sébastien Wolf, Alexis M Dubreuil, Tommaso Bertoni, Urs Lucas Böhm, Volker Bormuth, Raphaël Candelier, Sophia Karpenko, David G C Hildebrand, Isaac H Bianco, Rémi Monasson,[...]. Nat Commun 2017
22
Ancestral Circuits for the Coordinated Modulation of Brain State.
Matthew Lovett-Barron, Aaron S Andalman, William E Allen, Sam Vesuna, Isaac Kauvar, Vanessa M Burns, Karl Deisseroth. Cell 2017
Matthew Lovett-Barron, Aaron S Andalman, William E Allen, Sam Vesuna, Isaac Kauvar, Vanessa M Burns, Karl Deisseroth. Cell 2017
20
A Visual Pathway for Looming-Evoked Escape in Larval Zebrafish.
Incinur Temizer, Joseph C Donovan, Herwig Baier, Julia L Semmelhack. Curr Biol 2015
Incinur Temizer, Joseph C Donovan, Herwig Baier, Julia L Semmelhack. Curr Biol 2015
20
A Cellular-Resolution Atlas of the Larval Zebrafish Brain.
Michael Kunst, Eva Laurell, Nouwar Mokayes, Anna Kramer, Fumi Kubo, António M Fernandes, Dominique Förster, Marco Dal Maschio, Herwig Baier. Neuron 2019
Michael Kunst, Eva Laurell, Nouwar Mokayes, Anna Kramer, Fumi Kubo, António M Fernandes, Dominique Förster, Marco Dal Maschio, Herwig Baier. Neuron 2019
20
The retinal projectome reveals brain-area-specific visual representations generated by ganglion cell diversity.
Estuardo Robles, Eva Laurell, Herwig Baier. Curr Biol 2014
Estuardo Robles, Eva Laurell, Herwig Baier. Curr Biol 2014
20
Glia Accumulate Evidence that Actions Are Futile and Suppress Unsuccessful Behavior.
Yu Mu, Davis V Bennett, Mikail Rubinov, Sujatha Narayan, Chao-Tsung Yang, Masashi Tanimoto, Brett D Mensh, Loren L Looger, Misha B Ahrens. Cell 2019
Yu Mu, Davis V Bennett, Mikail Rubinov, Sujatha Narayan, Chao-Tsung Yang, Masashi Tanimoto, Brett D Mensh, Loren L Looger, Misha B Ahrens. Cell 2019
20
Spontaneous behaviors drive multidimensional, brainwide activity.
Carsen Stringer, Marius Pachitariu, Nicholas Steinmetz, Charu Bai Reddy, Matteo Carandini, Kenneth D Harris. Science 2019
Carsen Stringer, Marius Pachitariu, Nicholas Steinmetz, Charu Bai Reddy, Matteo Carandini, Kenneth D Harris. Science 2019
20
Neural circuits for evidence accumulation and decision making in larval zebrafish.
Armin Bahl, Florian Engert. Nat Neurosci 2020
Armin Bahl, Florian Engert. Nat Neurosci 2020
25
Control of visually guided behavior by distinct populations of spinal projection neurons.
Michael B Orger, Adam R Kampff, Kristen E Severi, Johann H Bollmann, Florian Engert. Nat Neurosci 2008
Michael B Orger, Adam R Kampff, Kristen E Severi, Johann H Bollmann, Florian Engert. Nat Neurosci 2008
17
Linking Neurons to Network Function and Behavior by Two-Photon Holographic Optogenetics and Volumetric Imaging.
Marco Dal Maschio, Joseph C Donovan, Thomas O Helmbrecht, Herwig Baier. Neuron 2017
Marco Dal Maschio, Joseph C Donovan, Thomas O Helmbrecht, Herwig Baier. Neuron 2017
17
The Serotonergic System Tracks the Outcomes of Actions to Mediate Short-Term Motor Learning.
Takashi Kawashima, Maarten F Zwart, Chao-Tsung Yang, Brett D Mensh, Misha B Ahrens. Cell 2016
Takashi Kawashima, Maarten F Zwart, Chao-Tsung Yang, Brett D Mensh, Misha B Ahrens. Cell 2016
17
Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data.
Eftychios A Pnevmatikakis, Daniel Soudry, Yuanjun Gao, Timothy A Machado, Josh Merel, David Pfau, Thomas Reardon, Yu Mu, Clay Lacefield, Weijian Yang,[...]. Neuron 2016
Eftychios A Pnevmatikakis, Daniel Soudry, Yuanjun Gao, Timothy A Machado, Josh Merel, David Pfau, Thomas Reardon, Yu Mu, Clay Lacefield, Weijian Yang,[...]. Neuron 2016
17
Whole-brain serial-section electron microscopy in larval zebrafish.
David Grant Colburn Hildebrand, Marcelo Cicconet, Russel Miguel Torres, Woohyuk Choi, Tran Minh Quan, Jungmin Moon, Arthur Willis Wetzel, Andrew Scott Champion, Brett Jesse Graham, Owen Randlett,[...]. Nature 2017
David Grant Colburn Hildebrand, Marcelo Cicconet, Russel Miguel Torres, Woohyuk Choi, Tran Minh Quan, Jungmin Moon, Arthur Willis Wetzel, Andrew Scott Champion, Brett Jesse Graham, Owen Randlett,[...]. Nature 2017
17
Functional architecture of an optic flow-responsive area that drives horizontal eye movements in zebrafish.
Fumi Kubo, Bastian Hablitzel, Marco Dal Maschio, Wolfgang Driever, Herwig Baier, Aristides B Arrenberg. Neuron 2014
Fumi Kubo, Bastian Hablitzel, Marco Dal Maschio, Wolfgang Driever, Herwig Baier, Aristides B Arrenberg. Neuron 2014
17
Pan-neuronal calcium imaging with cellular resolution in freely swimming zebrafish.
Dal Hyung Kim, Jungsoo Kim, João C Marques, Abhinav Grama, David G C Hildebrand, Wenchao Gu, Jennifer M Li, Drew N Robson. Nat Methods 2017
Dal Hyung Kim, Jungsoo Kim, João C Marques, Abhinav Grama, David G C Hildebrand, Wenchao Gu, Jennifer M Li, Drew N Robson. Nat Methods 2017
17
Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion.
Timothy W Dunn, Yu Mu, Sujatha Narayan, Owen Randlett, Eva A Naumann, Chao-Tsung Yang, Alexander F Schier, Jeremy Freeman, Florian Engert, Misha B Ahrens. Elife 2016
Timothy W Dunn, Yu Mu, Sujatha Narayan, Owen Randlett, Eva A Naumann, Chao-Tsung Yang, Alexander F Schier, Jeremy Freeman, Florian Engert, Misha B Ahrens. Elife 2016
17
Structure of the Zebrafish Locomotor Repertoire Revealed with Unsupervised Behavioral Clustering.
João C Marques, Simone Lackner, Rita Félix, Michael B Orger. Curr Biol 2018
João C Marques, Simone Lackner, Rita Félix, Michael B Orger. Curr Biol 2018
17
Nonrigid image registration in shared-memory multiprocessor environments with application to brains, breasts, and bees.
Torsten Rohlfing, Calvin R Maurer. IEEE Trans Inf Technol Biomed 2003
Torsten Rohlfing, Calvin R Maurer. IEEE Trans Inf Technol Biomed 2003
17
Evidence accumulation during a sensorimotor decision task revealed by whole-brain imaging.
Elena I Dragomir, Vilim Štih, Ruben Portugues. Nat Neurosci 2020
Elena I Dragomir, Vilim Štih, Ruben Portugues. Nat Neurosci 2020
44
Parametric functional maps of visual inputs to the tectum.
Nikolas Nikolaou, Andrew S Lowe, Alison S Walker, Fatima Abbas, Paul R Hunter, Ian D Thompson, Martin P Meyer. Neuron 2012
Nikolas Nikolaou, Andrew S Lowe, Alison S Walker, Fatima Abbas, Paul R Hunter, Ian D Thompson, Martin P Meyer. Neuron 2012
15
Development of the retinofugal projections in the embryonic and larval zebrafish (Brachydanio rerio).
J D Burrill, S S Easter. J Comp Neurol 1994
J D Burrill, S S Easter. J Comp Neurol 1994
15
Selective processing of all rotational and translational optic flow directions in the zebrafish pretectum and tectum.
Kun Wang, Julian Hinz, Väinö Haikala, Dierk F Reiff, Aristides B Arrenberg. BMC Biol 2019
Kun Wang, Julian Hinz, Väinö Haikala, Dierk F Reiff, Aristides B Arrenberg. BMC Biol 2019
31
Left Habenula Mediates Light-Preference Behavior in Zebrafish via an Asymmetrical Visual Pathway.
Bai-Bing Zhang, Yuan-Yuan Yao, He-Fei Zhang, Koichi Kawakami, Jiu-Lin Du. Neuron 2017
Bai-Bing Zhang, Yuan-Yuan Yao, He-Fei Zhang, Koichi Kawakami, Jiu-Lin Du. Neuron 2017
15
A dedicated visual pathway for prey detection in larval zebrafish.
Julia L Semmelhack, Joseph C Donovan, Tod R Thiele, Enrico Kuehn, Eva Laurell, Herwig Baier. Elife 2014
Julia L Semmelhack, Joseph C Donovan, Tod R Thiele, Enrico Kuehn, Eva Laurell, Herwig Baier. Elife 2014
15
Visuomotor transformations underlying hunting behavior in zebrafish.
Isaac H Bianco, Florian Engert. Curr Biol 2015
Isaac H Bianco, Florian Engert. Curr Biol 2015
15
Functional Profiles of Visual-, Auditory-, and Water Flow-Responsive Neurons in the Zebrafish Tectum.
Andrew W Thompson, Gilles C Vanwalleghem, Lucy A Heap, Ethan K Scott. Curr Biol 2016
Andrew W Thompson, Gilles C Vanwalleghem, Lucy A Heap, Ethan K Scott. Curr Biol 2016
18
Neuronal Architecture of a Visual Center that Processes Optic Flow.
Anna Kramer, Yunmin Wu, Herwig Baier, Fumi Kubo. Neuron 2019
Anna Kramer, Yunmin Wu, Herwig Baier, Fumi Kubo. Neuron 2019
33
Global brain dynamics embed the motor command sequence of Caenorhabditis elegans.
Saul Kato, Harris S Kaplan, Tina Schrödel, Susanne Skora, Theodore H Lindsay, Eviatar Yemini, Shawn Lockery, Manuel Zimmer. Cell 2015
Saul Kato, Harris S Kaplan, Tina Schrödel, Susanne Skora, Theodore H Lindsay, Eviatar Yemini, Shawn Lockery, Manuel Zimmer. Cell 2015
15
Fully integrated silicon probes for high-density recording of neural activity.
James J Jun, Nicholas A Steinmetz, Joshua H Siegle, Daniel J Denman, Marius Bauza, Brian Barbarits, Albert K Lee, Costas A Anastassiou, Alexandru Andrei, Çağatay Aydın,[...]. Nature 2017
James J Jun, Nicholas A Steinmetz, Joshua H Siegle, Daniel J Denman, Marius Bauza, Brian Barbarits, Albert K Lee, Costas A Anastassiou, Alexandru Andrei, Çağatay Aydın,[...]. Nature 2017
13
Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
13
CaImAn an open source tool for scalable calcium imaging data analysis.
Andrea Giovannucci, Johannes Friedrich, Pat Gunn, Jérémie Kalfon, Brandon L Brown, Sue Ann Koay, Jiannis Taxidis, Farzaneh Najafi, Jeffrey L Gauthier, Pengcheng Zhou,[...]. Elife 2019
Andrea Giovannucci, Johannes Friedrich, Pat Gunn, Jérémie Kalfon, Brandon L Brown, Sue Ann Koay, Jiannis Taxidis, Farzaneh Najafi, Jeffrey L Gauthier, Pengcheng Zhou,[...]. Elife 2019
13
Electron Microscopic Reconstruction of Functionally Identified Cells in a Neural Integrator.
Ashwin Vishwanathan, Kayvon Daie, Alexandro D Ramirez, Jeff W Lichtman, Emre R F Aksay, H Sebastian Seung. Curr Biol 2017
Ashwin Vishwanathan, Kayvon Daie, Alexandro D Ramirez, Jeff W Lichtman, Emre R F Aksay, H Sebastian Seung. Curr Biol 2017
22
Development of social behavior in young zebrafish.
Elena Dreosti, Gonçalo Lopes, Adam R Kampff, Stephen W Wilson. Front Neural Circuits 2015
Elena Dreosti, Gonçalo Lopes, Adam R Kampff, Stephen W Wilson. Front Neural Circuits 2015
13
Whole-brain calcium imaging with cellular resolution in freely behaving Caenorhabditis elegans.
Jeffrey P Nguyen, Frederick B Shipley, Ashley N Linder, George S Plummer, Mochi Liu, Sagar U Setru, Joshua W Shaevitz, Andrew M Leifer. Proc Natl Acad Sci U S A 2016
Jeffrey P Nguyen, Frederick B Shipley, Ashley N Linder, George S Plummer, Mochi Liu, Sagar U Setru, Joshua W Shaevitz, Andrew M Leifer. Proc Natl Acad Sci U S A 2016
13
Fast near-whole-brain imaging in adult Drosophila during responses to stimuli and behavior.
Sophie Aimon, Takeo Katsuki, Tongqiu Jia, Logan Grosenick, Michael Broxton, Karl Deisseroth, Terrence J Sejnowski, Ralph J Greenspan. PLoS Biol 2019
Sophie Aimon, Takeo Katsuki, Tongqiu Jia, Logan Grosenick, Michael Broxton, Karl Deisseroth, Terrence J Sejnowski, Ralph J Greenspan. PLoS Biol 2019
15
Neuronal Dynamics Regulating Brain and Behavioral State Transitions.
Aaron S Andalman, Vanessa M Burns, Matthew Lovett-Barron, Michael Broxton, Ben Poole, Samuel J Yang, Logan Grosenick, Talia N Lerner, Ritchie Chen, Tyler Benster,[...]. Cell 2019
Aaron S Andalman, Vanessa M Burns, Matthew Lovett-Barron, Michael Broxton, Ben Poole, Samuel J Yang, Logan Grosenick, Talia N Lerner, Ritchie Chen, Tyler Benster,[...]. Cell 2019
13
Cerebellar Neurodynamics Predict Decision Timing and Outcome on the Single-Trial Level.
Qian Lin, Jason Manley, Magdalena Helmreich, Friederike Schlumm, Jennifer M Li, Drew N Robson, Florian Engert, Alexander Schier, Tobias Nöbauer, Alipasha Vaziri. Cell 2020
Qian Lin, Jason Manley, Magdalena Helmreich, Friederike Schlumm, Jennifer M Li, Drew N Robson, Florian Engert, Alexander Schier, Tobias Nöbauer, Alipasha Vaziri. Cell 2020
23
Neural control and modulation of swimming speed in the larval zebrafish.
Kristen E Severi, Ruben Portugues, João C Marques, Donald M O'Malley, Michael B Orger, Florian Engert. Neuron 2014
Kristen E Severi, Ruben Portugues, João C Marques, Donald M O'Malley, Michael B Orger, Florian Engert. Neuron 2014
11
Transgenic tools to characterize neuronal properties of discrete populations of zebrafish neurons.
Chie Satou, Yukiko Kimura, Hiromi Hirata, Maximiliano L Suster, Koichi Kawakami, Shin-ichi Higashijima. Development 2013
Chie Satou, Yukiko Kimura, Hiromi Hirata, Maximiliano L Suster, Koichi Kawakami, Shin-ichi Higashijima. Development 2013
11
Regression-based identification of behavior-encoding neurons during large-scale optical imaging of neural activity at cellular resolution.
Andrew Miri, Kayvon Daie, Rebecca D Burdine, Emre Aksay, David W Tank. J Neurophysiol 2011
Andrew Miri, Kayvon Daie, Rebecca D Burdine, Emre Aksay, David W Tank. J Neurophysiol 2011
11
Light-sheet functional imaging in fictively behaving zebrafish.
Nikita Vladimirov, Yu Mu, Takashi Kawashima, Davis V Bennett, Chao-Tsung Yang, Loren L Looger, Philipp J Keller, Jeremy Freeman, Misha B Ahrens. Nat Methods 2014
Nikita Vladimirov, Yu Mu, Takashi Kawashima, Davis V Bennett, Chao-Tsung Yang, Loren L Looger, Philipp J Keller, Jeremy Freeman, Misha B Ahrens. Nat Methods 2014
11
Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.