A citation-based method for searching scientific literature

Piera Calamita, Guido Gatti, Annarita Miluzio, Alessandra Scagliola, Stefano Biffo. Front Genet 2018
Times Cited: 19







List of co-cited articles
87 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Ribosomopathies: There's strength in numbers.
Eric W Mills, Rachel Green. Science 2017
220
26


Cancer Biogenesis in Ribosomopathies.
Sergey O Sulima, Kim R Kampen, Kim De Keersmaecker. Cells 2019
33
21

A new system for naming ribosomal proteins.
Nenad Ban, Roland Beckmann, Jamie H D Cate, Jonathan D Dinman, François Dragon, Steven R Ellis, Denis L J Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M Lipton,[...]. Curr Opin Struct Biol 2014
365
21

The Mammalian Ribo-interactome Reveals Ribosome Functional Diversity and Heterogeneity.
Deniz Simsek, Gerald C Tiu, Ryan A Flynn, Gun W Byeon, Kathrin Leppek, Adele F Xu, Howard Y Chang, Maria Barna. Cell 2017
203
21

Heterogeneous Ribosomes Preferentially Translate Distinct Subpools of mRNAs Genome-wide.
Zhen Shi, Kotaro Fujii, Kyle M Kovary, Naomi R Genuth, Hannes L Röst, Mary N Teruel, Maria Barna. Mol Cell 2017
304
21

New frontiers in translational control of the cancer genome.
Morgan L Truitt, Davide Ruggero. Nat Rev Cancer 2016
197
15

How Ribosomes Translate Cancer.
Sergey O Sulima, Isabel J F Hofman, Kim De Keersmaecker, Jonathan D Dinman. Cancer Discov 2017
94
15

An overview of pre-ribosomal RNA processing in eukaryotes.
Anthony K Henras, Célia Plisson-Chastang, Marie-Françoise O'Donohue, Anirban Chakraborty, Pierre-Emmanuel Gleizes. Wiley Interdiscip Rev RNA 2015
336
15

The Ribosome Biogenesis-Cancer Connection.
Marianna Penzo, Lorenzo Montanaro, Davide Treré, Massimo Derenzini. Cells 2019
92
15

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
Mark D Robinson, Davis J McCarthy, Gordon K Smyth. Bioinformatics 2010
15

Mechanism of eIF6 release from the nascent 60S ribosomal subunit.
Félix Weis, Emmanuel Giudice, Mark Churcher, Li Jin, Christine Hilcenko, Chi C Wong, David Traynor, Robert R Kay, Alan J Warren. Nat Struct Mol Biol 2015
115
10

Trimmomatic: a flexible trimmer for Illumina sequence data.
Anthony M Bolger, Marc Lohse, Bjoern Usadel. Bioinformatics 2014
10

A Puzzle of Life: Crafting Ribosomal Subunits.
Dieter Kressler, Ed Hurt, Jochen Baßler. Trends Biochem Sci 2017
103
10

Differential Requirement for Translation Initiation Factor Pathways during Ecdysone-Dependent Neuronal Remodeling in Drosophila.
Sandra Rode, Henrike Ohm, Lea Anhäuser, Marina Wagner, Mechthild Rosing, Xiaobing Deng, Olga Sin, Sebastian A Leidel, Erik Storkebaum, Andrea Rentmeister,[...]. Cell Rep 2018
17
11

Crosstalks between translation and metabolism in cancer.
Stefano Biffo, Nicola Manfrini, Sara Ricciardi. Curr Opin Genet Dev 2018
21
10

STAR: ultrafast universal RNA-seq aligner.
Alexander Dobin, Carrie A Davis, Felix Schlesinger, Jorg Drenkow, Chris Zaleski, Sonali Jha, Philippe Batut, Mark Chaisson, Thomas R Gingeras. Bioinformatics 2013
10

Release of eIF6 (p27BBP) from the 60S subunit allows 80S ribosome assembly.
Marcello Ceci, Cristina Gaviraghi, Chiara Gorrini, Leonardo A Sala, Nina Offenhäuser, Pier Carlo Marchisio, Stefano Biffo. Nature 2003
314
10


Translational control in cancer etiology.
Davide Ruggero. Cold Spring Harb Perspect Biol 2013
222
10

Shade is the Drosophila P450 enzyme that mediates the hydroxylation of ecdysone to the steroid insect molting hormone 20-hydroxyecdysone.
Anna Petryk, James T Warren, Guillermo Marqués, Michael P Jarcho, Lawrence I Gilbert, Jonathan Kahler, Jean-Philippe Parvy, Yutai Li, Chantal Dauphin-Villemant, Michael B O'Connor. Proc Natl Acad Sci U S A 2003
298
10

Economics of ribosome biosynthesis.
J R Warner, J Vilardell, J H Sohn. Cold Spring Harb Symp Quant Biol 2001
94
10

SBDS-Deficient Cells Have an Altered Homeostatic Equilibrium due to Translational Inefficiency Which Explains their Reduced Fitness and Provides a Logical Framework for Intervention.
Piera Calamita, Annarita Miluzio, Arianna Russo, Elisa Pesce, Sara Ricciardi, Farhat Khanim, Cristina Cheroni, Roberta Alfieri, Marilena Mancino, Chiara Gorrini,[...]. PLoS Genet 2017
25
10

Severely incapacitating mutations in patients with extreme short stature identify RNA-processing endoribonuclease RMRP as an essential cell growth regulator.
Christian T Thiel, Denise Horn, Bernhard Zabel, Arif B Ekici, Kelly Salinas, Erich Gebhart, Franz Rüschendorf, Heinrich Sticht, Jürgen Spranger, Dietmar Müller,[...]. Am J Hum Genet 2005
97
10

rRNA pseudouridylation defects affect ribosomal ligand binding and translational fidelity from yeast to human cells.
Karen Jack, Cristian Bellodi, Dori M Landry, Rachel O Niederer, Arturas Meskauskas, Sharmishtha Musalgaonkar, Noam Kopmar, Olya Krasnykh, Alison M Dean, Sunnie R Thompson,[...]. Mol Cell 2011
192
10

The ribosomal RPL10 R98S mutation drives IRES-dependent BCL-2 translation in T-ALL.
Kim R Kampen, Sergey O Sulima, Benno Verbelen, Tiziana Girardi, Stijn Vereecke, Gianmarco Rinaldi, Jelle Verbeeck, Joyce Op de Beeck, Anne Uyttebroeck, Jules P P Meijerink,[...]. Leukemia 2019
35
10

The gene encoding ribosomal protein S19 is mutated in Diamond-Blackfan anaemia.
N Draptchinskaia, P Gustavsson, B Andersson, M Pettersson, T N Willig, I Dianzani, S Ball, G Tchernia, J Klar, H Matsson,[...]. Nat Genet 1999
618
10

Variant ribosomal RNA alleles are conserved and exhibit tissue-specific expression.
Matthew M Parks, Chad M Kurylo, Randall A Dass, Linda Bojmar, David Lyden, C Theresa Vincent, Scott C Blanchard. Sci Adv 2018
105
10

Germline mutation of RPS20, encoding a ribosomal protein, causes predisposition to hereditary nonpolyposis colorectal carcinoma without DNA mismatch repair deficiency.
Taina T Nieminen, Marie-Françoise O'Donohue, Yunpeng Wu, Hannes Lohi, Stephen W Scherer, Andrew D Paterson, Pekka Ellonen, Wael M Abdel-Rahman, Satu Valo, Jukka-Pekka Mecklin,[...]. Gastroenterology 2014
113
10

Frequent mutations in the RPL22 gene and its clinical and functional implications.
Akiva P Novetsky, Israel Zighelboim, Dominic M Thompson, Matthew A Powell, David G Mutch, Paul J Goodfellow. Gynecol Oncol 2013
49
10

The ribosomal protein gene RPL5 is a haploinsufficient tumor suppressor in multiple cancer types.
Laura Fancello, Kim R Kampen, Isabel J F Hofman, Jelle Verbeeck, Kim De Keersmaecker. Oncotarget 2017
64
10

Mutations in genes encoding subunits of RNA polymerases I and III cause Treacher Collins syndrome.
Johannes G Dauwerse, Jill Dixon, Saskia Seland, Claudia A L Ruivenkamp, Arie van Haeringen, Lies H Hoefsloot, Dorien J M Peters, Agnes Clement-de Boers, Cornelia Daumer-Haas, Robert Maiwald,[...]. Nat Genet 2011
214
10

Ribosome assembly coming into focus.
Sebastian Klinge, John L Woolford. Nat Rev Mol Cell Biol 2019
202
10


p53 acts as a safeguard of translational control by regulating fibrillarin and rRNA methylation in cancer.
Virginie Marcel, Sandra E Ghayad, Stéphane Belin, Gabriel Therizols, Anne-Pierre Morel, Eduardo Solano-Gonzàlez, Julie A Vendrell, Sabine Hacot, Hichem C Mertani, Marie Alexandra Albaret,[...]. Cancer Cell 2013
182
10

Analysis of the ribosomal protein S19 interactome.
Stefania Orrù, Anna Aspesi, Marta Armiraglio, Marianna Caterino, Fabrizio Loreni, Margherita Ruoppolo, Claudio Santoro, Irma Dianzani. Mol Cell Proteomics 2007
45
10

HCV IRES Captures an Actively Translating 80S Ribosome.
Takeshi Yokoyama, Kodai Machida, Wakana Iwasaki, Tomoaki Shigeta, Madoka Nishimoto, Mari Takahashi, Ayako Sakamoto, Mayumi Yonemochi, Yoshie Harada, Hideki Shigematsu,[...]. Mol Cell 2019
21
10

Identification of sites of 2'-O-methylation vulnerability in human ribosomal RNAs by systematic mapping.
Sunny Sharma, Virginie Marchand, Yuri Motorin, Denis L J Lafontaine. Sci Rep 2017
63
10

p53 and ribosome biogenesis stress: the essentials.
Lior Golomb, Sinisa Volarevic, Moshe Oren. FEBS Lett 2014
152
10

A hierarchy of ATP-consuming processes in mammalian cells.
F Buttgereit, M D Brand. Biochem J 1995
549
10

RPL5 on 1p22.1 is recurrently deleted in multiple myeloma and its expression is linked to bortezomib response.
I J F Hofman, M van Duin, E De Bruyne, L Fancello, G Mulligan, E Geerdens, E Garelli, C Mancini, H Lemmens, M Delforge,[...]. Leukemia 2017
33
10


Impaired control of IRES-mediated translation in X-linked dyskeratosis congenita.
Andrew Yoon, Guang Peng, Yves Brandenburger, Ornella Zollo, Wei Xu, Eduardo Rego, Davide Ruggero. Science 2006
305
10

The T-cell leukemia-associated ribosomal RPL10 R98S mutation enhances JAK-STAT signaling.
T Girardi, S Vereecke, S O Sulima, Y Khan, L Fancello, J W Briggs, C Schwab, J Op de Beeck, J Verbeeck, J Royaert,[...]. Leukemia 2018
44
10

DNA damage responses and oxidative stress in dyskeratosis congenita.
Larisa Pereboeva, Erik Westin, Toral Patel, Ian Flaniken, Lawrence Lamb, Aloysius Klingelhutz, Frederick Goldman. PLoS One 2013
34
10


Ribosomal deficiencies in Diamond-Blackfan anemia impair translation of transcripts essential for differentiation of murine and human erythroblasts.
Rastislav Horos, Hanna Ijspeert, Dagmar Pospisilova, Regine Sendtner, Charlotte Andrieu-Soler, Erdogan Taskesen, Andrzej Nieradka, Radek Cmejla, Michael Sendtner, Ivo P Touw,[...]. Blood 2012
115
10

Inactivation of ribosomal protein L22 promotes transformation by induction of the stemness factor, Lin28B.
Shuyun Rao, Sang-Yun Lee, Alejandro Gutierrez, Jacqueline Perrigoue, Roshan J Thapa, Zhigang Tu, John R Jeffers, Michele Rhodes, Stephen Anderson, Tamas Oravecz,[...]. Blood 2012
103
10

Pseudouridine profiling reveals regulated mRNA pseudouridylation in yeast and human cells.
Thomas M Carlile, Maria F Rojas-Duran, Boris Zinshteyn, Hakyung Shin, Kristen M Bartoli, Wendy V Gilbert. Nature 2014
559
10

Transcriptome-wide mapping reveals widespread dynamic-regulated pseudouridylation of ncRNA and mRNA.
Schraga Schwartz, Douglas A Bernstein, Maxwell R Mumbach, Marko Jovanovic, Rebecca H Herbst, Brian X León-Ricardo, Jesse M Engreitz, Mitchell Guttman, Rahul Satija, Eric S Lander,[...]. Cell 2014
545
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.