A citation-based method for searching scientific literature

Molly OhAinle, Louisa Helms, Jolien Vermeire, Ferdinand Roesch, Daryl Humes, Ryan Basom, Jeffrey J Delrow, Julie Overbaugh, Michael Emerman. Elife 2018
Times Cited: 39







List of co-cited articles
739 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The cytoplasmic body component TRIM5alpha restricts HIV-1 infection in Old World monkeys.
Matthew Stremlau, Christopher M Owens, Michel J Perron, Michael Kiessling, Patrick Autissier, Joseph Sodroski. Nature 2004
35

Human MX2 is an interferon-induced post-entry inhibitor of HIV-1 infection.
Caroline Goujon, Olivier Moncorgé, Hélène Bauby, Tomas Doyle, Christopher C Ward, Torsten Schaller, Stéphane Hué, Wendy S Barclay, Reiner Schulz, Michael H Malim. Nature 2013
370
30

Tetherin inhibits retrovirus release and is antagonized by HIV-1 Vpu.
Stuart J D Neil, Trinity Zang, Paul D Bieniasz. Nature 2008
28

MX2 is an interferon-induced inhibitor of HIV-1 infection.
Melissa Kane, Shalini S Yadav, Julia Bitzegeio, Sebla B Kutluay, Trinity Zang, Sam J Wilson, John W Schoggins, Charles M Rice, Masahiro Yamashita, Theodora Hatziioannou,[...]. Nature 2013
317
28

A diverse range of gene products are effectors of the type I interferon antiviral response.
John W Schoggins, Sam J Wilson, Maryline Panis, Mary Y Murphy, Christopher T Jones, Paul Bieniasz, Charles M Rice. Nature 2011
28

Identification of Interferon-Stimulated Genes with Antiretroviral Activity.
Melissa Kane, Trinity M Zang, Suzannah J Rihn, Fengwen Zhang, Tonya Kueck, Mudathir Alim, John Schoggins, Charles M Rice, Sam J Wilson, Paul D Bieniasz. Cell Host Microbe 2016
104
25

Immunoproteasome activation enables human TRIM5α restriction of HIV-1.
Jose M Jimenez-Guardeño, Luis Apolonia, Gilberto Betancor, Michael H Malim. Nat Microbiol 2019
30
33

Resistance of Transmitted Founder HIV-1 to IFITM-Mediated Restriction.
Toshana L Foster, Harry Wilson, Shilpa S Iyer, Karen Coss, Katie Doores, Sarah Smith, Paul Kellam, Andrés Finzi, Persephone Borrow, Beatrice H Hahn,[...]. Cell Host Microbe 2016
103
20

Global analysis of host-pathogen interactions that regulate early-stage HIV-1 replication.
Renate König, Yingyao Zhou, Daniel Elleder, Tracy L Diamond, Ghislain M C Bonamy, Jeffrey T Irelan, Chih-Yuan Chiang, Buu P Tu, Paul D De Jesus, Caroline E Lilley,[...]. Cell 2008
719
20

The IFITM proteins inhibit HIV-1 infection.
Jennifer Lu, Qinghua Pan, Liwei Rong, Wei He, Shan-Lu Liu, Chen Liang. J Virol 2011
266
20

CG dinucleotide suppression enables antiviral defence targeting non-self RNA.
Matthew A Takata, Daniel Gonçalves-Carneiro, Trinity M Zang, Steven J Soll, Ashley York, Daniel Blanco-Melo, Paul D Bieniasz. Nature 2017
167
20

Specific recognition and accelerated uncoating of retroviral capsids by the TRIM5alpha restriction factor.
Matthew Stremlau, Michel Perron, Mark Lee, Yuan Li, Byeongwoon Song, Hassan Javanbakht, Felipe Diaz-Griffero, Donovan J Anderson, Wesley I Sundquist, Joseph Sodroski. Proc Natl Acad Sci U S A 2006
560
20

Primate TRIM5 proteins form hexagonal nets on HIV-1 capsids.
Yen-Li Li, Viswanathan Chandrasekaran, Stephen D Carter, Cora L Woodward, Devin E Christensen, Kelly A Dryden, Owen Pornillos, Mark Yeager, Barbie K Ganser-Pornillos, Grant J Jensen,[...]. Elife 2016
60
20

TRIM5 is an innate immune sensor for the retrovirus capsid lattice.
Thomas Pertel, Stéphane Hausmann, Damien Morger, Sara Züger, Jessica Guerra, Josefina Lascano, Christian Reinhard, Federico A Santoni, Pradeep D Uchil, Laurence Chatel,[...]. Nature 2011
452
20

Hexagonal assembly of a restricting TRIM5alpha protein.
Barbie K Ganser-Pornillos, Viswanathan Chandrasekaran, Owen Pornillos, Joseph G Sodroski, Wesley I Sundquist, Mark Yeager. Proc Natl Acad Sci U S A 2011
186
20

SAMHD1 is the dendritic- and myeloid-cell-specific HIV-1 restriction factor counteracted by Vpx.
Nadine Laguette, Bijan Sobhian, Nicoletta Casartelli, Mathieu Ringeard, Christine Chable-Bessia, Emmanuel Ségéral, Ahmad Yatim, Stéphane Emiliani, Olivier Schwartz, Monsef Benkirane. Nature 2011
20

Interferon-stimulated genes: a complex web of host defenses.
William M Schneider, Meike Dittmann Chevillotte, Charles M Rice. Annu Rev Immunol 2014
20

Genome-wide CRISPR/Cas9 Screen Identifies Host Factors Essential for Influenza Virus Replication.
Julianna Han, Jasmine T Perez, Cindy Chen, Yan Li, Asiel Benitez, Matheswaran Kandasamy, Yoontae Lee, Jorge Andrade, Benjamin tenOever, Balaji Manicassamy. Cell Rep 2018
99
20

HIV Restriction Factors and Mechanisms of Evasion.
Michael H Malim, Paul D Bieniasz. Cold Spring Harb Perspect Med 2012
311
17

Expression of the zinc-finger antiviral protein inhibits alphavirus replication.
Matthew J Bick, John-William N Carroll, Guangxia Gao, Stephen P Goff, Charles M Rice, Margaret R MacDonald. J Virol 2003
227
17

Guanylate Binding Protein (GBP) 5 Is an Interferon-Inducible Inhibitor of HIV-1 Infectivity.
Christian Krapp, Dominik Hotter, Ali Gawanbacht, Paul J McLaren, Silvia F Kluge, Christina M Stürzel, Katharina Mack, Elisabeth Reith, Susanne Engelhart, Angela Ciuffi,[...]. Cell Host Microbe 2016
119
17

TRIM25 Enhances the Antiviral Action of Zinc-Finger Antiviral Protein (ZAP).
Melody M H Li, Zerlina Lau, Pamela Cheung, Eduardo G Aguilar, William M Schneider, Leonia Bozzacco, Henrik Molina, Eugen Buehler, Akinori Takaoka, Charles M Rice,[...]. PLoS Pathog 2017
87
17

Genome-scale RNAi screen for host factors required for HIV replication.
Honglin Zhou, Min Xu, Qian Huang, Adam T Gates, Xiaohua D Zhang, John C Castle, Erica Stec, Marc Ferrer, Berta Strulovici, Daria J Hazuda,[...]. Cell Host Microbe 2008
564
17

Inhibition of retroviral RNA production by ZAP, a CCCH-type zinc finger protein.
Guangxia Gao, Xuemin Guo, Stephen P Goff. Science 2002
304
17

The interferon-inducible MxB protein inhibits HIV-1 infection.
Zhenlong Liu, Qinghua Pan, Shilei Ding, Jin Qian, Fengwen Xu, Jinming Zhou, Shan Cen, Fei Guo, Chen Liang. Cell Host Microbe 2013
225
17


A genome-wide CRISPR screen identifies a restricted set of HIV host dependency factors.
Ryan J Park, Tim Wang, Dylan Koundakjian, Judd F Hultquist, Pedro Lamothe-Molina, Blandine Monel, Kathrin Schumann, Haiyan Yu, Kevin M Krupzcak, Wilfredo Garcia-Beltran,[...]. Nat Genet 2017
161
17

Identification of host proteins required for HIV infection through a functional genomic screen.
Abraham L Brass, Derek M Dykxhoorn, Yair Benita, Nan Yan, Alan Engelman, Ramnik J Xavier, Judy Lieberman, Stephen J Elledge. Science 2008
17

Isolation of a human gene that inhibits HIV-1 infection and is suppressed by the viral Vif protein.
Ann M Sheehy, Nathan C Gaddis, Jonathan D Choi, Michael H Malim. Nature 2002
17

The zinc-finger antiviral protein recruits the RNA processing exosome to degrade the target mRNA.
Xuemin Guo, Jing Ma, Jing Sun, Guangxia Gao. Proc Natl Acad Sci U S A 2007
182
17

A CRISPR screen identifies IFI6 as an ER-resident interferon effector that blocks flavivirus replication.
R Blake Richardson, Maikke B Ohlson, Jennifer L Eitson, Ashwani Kumar, Matthew B McDougal, Ian N Boys, Katrina B Mar, Pamela C De La Cruz-Rivera, Connor Douglas, Genevieve Konopka,[...]. Nat Microbiol 2018
65
17

Cyclophilin A retrotransposition into TRIM5 explains owl monkey resistance to HIV-1.
David M Sayah, Elena Sokolskaja, Lionel Berthoux, Jeremy Luban. Nature 2004
512
17

Cyclophilin A protects HIV-1 from restriction by human TRIM5α.
Kyusik Kim, Ann Dauphin, Sevnur Komurlu, Sean M McCauley, Leonid Yurkovetskiy, Claudia Carbone, William E Diehl, Caterina Strambio-De-Castillia, Edward M Campbell, Jeremy Luban. Nat Microbiol 2019
45
17

Improved vectors and genome-wide libraries for CRISPR screening.
Neville E Sanjana, Ophir Shalem, Feng Zhang. Nat Methods 2014
15

Stabilized human TRIM5α protects human T cells from HIV-1 infection.
Max W Richardson, Lili Guo, Frances Xin, Xiaolu Yang, James L Riley. Mol Ther 2014
25
24

Codon-usage-based inhibition of HIV protein synthesis by human schlafen 11.
Manqing Li, Elaine Kao, Xia Gao, Hilary Sandig, Kirsten Limmer, Mariana Pavon-Eternod, Thomas E Jones, Sebastien Landry, Tao Pan, Matthew D Weitzman,[...]. Nature 2012
198
15

Receptor usage dictates HIV-1 restriction by human TRIM5α in dendritic cell subsets.
Carla M S Ribeiro, Ramin Sarrami-Forooshani, Laurentia C Setiawan, Esther M Zijlstra-Willems, John L van Hamme, Wikky Tigchelaar, Nicole N van der Wel, Neeltje A Kootstra, Sonja I Gringhuis, Teunis B H Geijtenbeek. Nature 2016
88
15


A single amino acid change in the SPRY domain of human Trim5alpha leads to HIV-1 restriction.
Melvyn W Yap, Sébastien Nisole, Jonathan P Stoye. Curr Biol 2005
315
15

HIV-1 evades innate immune recognition through specific cofactor recruitment.
Jane Rasaiyaah, Choon Ping Tan, Adam J Fletcher, Amanda J Price, Caroline Blondeau, Laura Hilditch, David A Jacques, David L Selwood, Leo C James, Mahdad Noursadeghi,[...]. Nature 2013
295
15

Zinc-finger antiviral protein inhibits HIV-1 infection by selectively targeting multiply spliced viral mRNAs for degradation.
Yiping Zhu, Guifang Chen, Fengxiang Lv, Xinlu Wang, Xin Ji, Yihui Xu, Jing Sun, Li Wu, Yong-Tang Zheng, Guangxia Gao. Proc Natl Acad Sci U S A 2011
169
15

TRIM25 Is Required for the Antiviral Activity of Zinc Finger Antiviral Protein.
Xiaojiao Zheng, Xinlu Wang, Fan Tu, Qin Wang, Zusen Fan, Guangxia Gao. J Virol 2017
56
15

Trivalent RING Assembly on Retroviral Capsids Activates TRIM5 Ubiquitination and Innate Immune Signaling.
Adam J Fletcher, Marina Vaysburd, Sarah Maslen, Jingwei Zeng, J Mark Skehel, Greg J Towers, Leo C James. Cell Host Microbe 2018
42
15

Crystal structure of human cyclophilin A bound to the amino-terminal domain of HIV-1 capsid.
T R Gamble, F F Vajdos, S Yoo, D K Worthylake, M Houseweart, W I Sundquist, C P Hill. Cell 1996
578
15

The IFITM proteins mediate cellular resistance to influenza A H1N1 virus, West Nile virus, and dengue virus.
Abraham L Brass, I-Chueh Huang, Yair Benita, Sinu P John, Manoj N Krishnan, Eric M Feeley, Bethany J Ryan, Jessica L Weyer, Louise van der Weyden, Erol Fikrig,[...]. Cell 2009
849
15

Restriction of HIV-1 and other retroviruses by TRIM5.
Barbie K Ganser-Pornillos, Owen Pornillos. Nat Rev Microbiol 2019
41
15

Evolutionary conflicts between viruses and restriction factors shape immunity.
Nisha K Duggal, Michael Emerman. Nat Rev Immunol 2012
199
12

SERINC3 and SERINC5 restrict HIV-1 infectivity and are counteracted by Nef.
Yoshiko Usami, Yuanfei Wu, Heinrich G Göttlinger. Nature 2015
246
12

MAGeCK enables robust identification of essential genes from genome-scale CRISPR/Cas9 knockout screens.
Wei Li, Han Xu, Tengfei Xiao, Le Cong, Michael I Love, Feng Zhang, Rafael A Irizarry, Jun S Liu, Myles Brown, X Shirley Liu. Genome Biol 2014
611
12

A short hairpin RNA screen of interferon-stimulated genes identifies a novel negative regulator of the cellular antiviral response.
Jianqing Li, Steve C Ding, Hyelim Cho, Brian C Chung, Michael Gale, Sumit K Chanda, Michael S Diamond. mBio 2013
69
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.