A citation-based method for searching scientific literature

Dan Shen, Songlei Xue, Shuheng Chan, Yatong Sang, Saisai Wang, Yali Wang, Cai Chen, Bo Gao, Ferenc Mueller, Chengyi Song. Genes (Basel) 2018
Times Cited: 4







List of co-cited articles
28 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Tol2 transposon-mediated enhancer trap to identify developmentally regulated zebrafish genes in vivo.
Serguei Parinov, Igor Kondrichin, Vladimir Korzh, Alexander Emelyanov. Dev Dyn 2004
263
50

Harnessing a high cargo-capacity transposon for genetic applications in vertebrates.
Darius Balciunas, Kirk J Wangensteen, Andrew Wilber, Jason Bell, Aron Geurts, Sridhar Sivasubbu, Xin Wang, Perry B Hackett, David A Largaespada, R Scott McIvor,[...]. PLoS Genet 2006
220
50

A transposon-mediated gene trap approach identifies developmentally regulated genes in zebrafish.
Koichi Kawakami, Hisashi Takeda, Noriko Kawakami, Makoto Kobayashi, Naoto Matsuda, Masayoshi Mishina. Dev Cell 2004
593
50

Selective inhibition of tumor oncogenes by disruption of super-enhancers.
Jakob Lovén, Heather A Hoke, Charles Y Lin, Ashley Lau, David A Orlando, Christopher R Vakoc, James E Bradner, Tong Ihn Lee, Richard A Young. Cell 2013
50


Transposable element in fish.
A Koga, M Suzuki, H Inagaki, Y Bessho, H Hori. Nature 1996
175
50

Common physical properties of DNA affecting target site selection of sleeping beauty and other Tc1/mariner transposable elements.
Thomas J Vigdal, Christopher D Kaufman, Zsuzsanna Izsvák, Daniel F Voytas, Zoltán Ivics. J Mol Biol 2002
195
50

Transposons As Tools for Functional Genomics in Vertebrate Models.
Koichi Kawakami, David A Largaespada, Zoltán Ivics. Trends Genet 2017
30
50

Genome-Wide Analysis of Transposon and Retroviral Insertions Reveals Preferential Integrations in Regions of DNA Flexibility.
Pavle Vrljicak, Shijie Tao, Gaurav K Varshney, Helen Ngoc Bao Quach, Adita Joshi, Matthew C LaFave, Shawn M Burgess, Karuna Sampath. G3 (Bethesda) 2016
13
50

Germline transgenesis in rodents by pronuclear microinjection of Sleeping Beauty transposons.
Zoltán Ivics, Lajos Mátés, Tien Yin Yau, Vladimír Landa, Vaclav Zidek, Sanum Bashir, Orsolya I Hoffmann, László Hiripi, Wiebke Garrels, Wilfried A Kues,[...]. Nat Protoc 2014
46
50

A highly soluble Sleeping Beauty transposase improves control of gene insertion.
Irma Querques, Andreas Mades, Cecilia Zuliani, Csaba Miskey, Miriam Alb, Esther Grueso, Markus Machwirth, Tobias Rausch, Hermann Einsele, Zoltán Ivics,[...]. Nat Biotechnol 2019
30
50

The ancient mariner sails again: transposition of the human Hsmar1 element by a reconstructed transposase and activities of the SETMAR protein on transposon ends.
Csaba Miskey, Balázs Papp, Lajos Mátés, Ludivine Sinzelle, Heiko Keller, Zsuzsanna Izsvák, Zoltán Ivics. Mol Cell Biol 2007
92
50

Genome-wide Profiling Reveals Remarkable Parallels Between Insertion Site Selection Properties of the MLV Retrovirus and the piggyBac Transposon in Primary Human CD4(+) T Cells.
Andreas Gogol-Döring, Ismahen Ammar, Saumyashree Gupta, Mario Bunse, Csaba Miskey, Wei Chen, Wolfgang Uckert, Thomas F Schulz, Zsuzsanna Izsvák, Zoltán Ivics. Mol Ther 2016
67
50


Prevention of Cholestatic Liver Disease and Reduced Tumorigenicity in a Murine Model of PFIC Type 3 Using Hybrid AAV-piggyBac Gene Therapy.
Susan M Siew, Sharon C Cunningham, Erhua Zhu, Szun S Tay, Elena Venuti, Christine Bolitho, Ian E Alexander. Hepatology 2019
12
50

Chromosomal transposition of a Tc1/mariner-like element in mouse embryonic stem cells.
G Luo, Z Ivics, Z Izsvák, A Bradley. Proc Natl Acad Sci U S A 1998
201
50

Efficient transposition of Tol2 in the mouse germline.
Vincent W Keng, Barbara J Ryan, Kirk J Wangensteen, Darius Balciunas, Christian Schmedt, Stephen C Ekker, David A Largaespada. Genetics 2009
30
50

Efficient Non-viral Gene Delivery into Human Hematopoietic Stem Cells by Minicircle Sleeping Beauty Transposon Vectors.
Marta Holstein, Cristina Mesa-Nuñez, Csaba Miskey, Elena Almarza, Valentina Poletti, Marco Schmeer, Esther Grueso, Juan Carlos Ordóñez Flores, Dennis Kobelt, Wolfgang Walther,[...]. Mol Ther 2018
22
50


PiggyBac-engineered T cells expressing a glypican-3-specific chimeric antigen receptor show potent activities against hepatocellular carcinoma.
Pei Wang, Wenxia Qin, Tao Liu, Duqing Jiang, Lianzhen Cui, Xiangzhen Liu, Yuan Fang, Xi Tang, Huajun Jin, Qijun Qian. Immunobiology 2020
15
50

Gene transfer efficiency and genome-wide integration profiling of Sleeping Beauty, Tol2, and piggyBac transposons in human primary T cells.
Xin Huang, Hongfeng Guo, Syam Tammana, Yong-Chul Jung, Emil Mellgren, Preetinder Bassi, Qing Cao, Zheng Jin Tu, Yeong C Kim, Stephen C Ekker,[...]. Mol Ther 2010
123
50

Efficient transposition of the piggyBac (PB) transposon in mammalian cells and mice.
Sheng Ding, Xiaohui Wu, Gang Li, Min Han, Yuan Zhuang, Tian Xu. Cell 2005
630
50

The catalytic domain of all eukaryotic cut-and-paste transposase superfamilies.
Yao-Wu Yuan, Susan R Wessler. Proc Natl Acad Sci U S A 2011
148
50

Comparative analysis of transposable element vector systems in human cells.
Ivana Grabundzija, Markus Irgang, Lajos Mátés, Eyayu Belay, Janka Matrai, Andreas Gogol-Döring, Koichi Kawakami, Wei Chen, Patricia Ruiz, Marinee K L Chuah,[...]. Mol Ther 2010
152
50

Enhanced CAR T-cell engineering using non-viral Sleeping Beauty transposition from minicircle vectors.
R Monjezi, C Miskey, T Gogishvili, M Schleef, M Schmeer, H Einsele, Z Ivics, M Hudecek. Leukemia 2017
103
50

Transposon-mediated genome manipulation in vertebrates.
Zoltán Ivics, Meng Amy Li, Lajos Mátés, Jef D Boeke, Andras Nagy, Allan Bradley, Zsuzsanna Izsvák. Nat Methods 2009
191
50

In vivo transposition of Minos, a Drosophila mobile element, in mammalian tissues.
L Zagoraiou, D Drabek, S Alexaki, J A Guy, A G Klinakis, A Langeveld, G Skavdis, C Mamalaki, F Grosveld, C Savakis. Proc Natl Acad Sci U S A 2001
55
50

The Frog Prince: a reconstructed transposon from Rana pipiens with high transpositional activity in vertebrate cells.
Csaba Miskey, Zsuzsanna Izsvák, Ronald H Plasterk, Zoltán Ivics. Nucleic Acids Res 2003
123
50



Enhancer biology and enhanceropathies.
Edwin Smith, Ali Shilatifard. Nat Struct Mol Biol 2014
166
25

Position-effect protection and enhancer blocking by the chicken beta-globin insulator are separable activities.
Félix Recillas-Targa, Michael J Pikaart, Bonnie Burgess-Beusse, Adam C Bell, Michael D Litt, Adam G West, Miklos Gaszner, Gary Felsenfeld. Proc Natl Acad Sci U S A 2002
289
25

Boundary functions in the control of gene expression.
J C Eissenberg, S C Elgin. Trends Genet 1991
98
25

Elimination of a long-range cis-regulatory module causes complete loss of limb-specific Shh expression and truncation of the mouse limb.
Tomoko Sagai, Masaki Hosoya, Youichi Mizushina, Masaru Tamura, Toshihiko Shiroishi. Development 2005
262
25

A functional survey of the enhancer activity of conserved non-coding sequences from vertebrate Iroquois cluster gene deserts.
Elisa de la Calle-Mustienes, Cármen Gloria Feijóo, Miguel Manzanares, Juan J Tena, Elisa Rodríguez-Seguel, Annalisa Letizia, Miguel L Allende, José Luis Gómez-Skarmeta. Genome Res 2005
150
25

Targeting neural circuitry in zebrafish using GAL4 enhancer trapping.
Ethan K Scott, Lindsay Mason, Aristides B Arrenberg, Limor Ziv, Nathan J Gosse, Tong Xiao, Neil C Chi, Kazuhide Asakawa, Koichi Kawakami, Herwig Baier. Nat Methods 2007
267
25

P-element-mediated enhancer detection: a versatile method to study development in Drosophila.
H J Bellen, C J O'Kane, C Wilson, U Grossniklaus, R K Pearson, W J Gehring. Genes Dev 1989
604
25

Enhancer trapping in zebrafish using the Sleeping Beauty transposon.
Darius Balciunas, Ann E Davidson, Sridhar Sivasubbu, Spencer B Hermanson, Zachary Welle, Stephen C Ekker. BMC Genomics 2004
129
25

[Enhancer trapping nearby rps26 gene in zebrafish mediated by the Tol2 transposon and it's annotation].
Yatong Sang, Dan Shen, Wei Chen, Shuheng Chan, Hao Gu, Bo Gao, Chengyi Song. Sheng Wu Gong Cheng Xue Bao 2018
1
100

Generation of an Enhancer-Trapping Vector for Insertional Mutagenesis in Zebrafish.
Chunyan Liu, Guili Song, Lin Mao, Yong Long, Qing Li, Zongbin Cui. PLoS One 2015
7
25

Gene Therapy with the Sleeping Beauty Transposon System.
Partow Kebriaei, Zsuzsanna Izsvák, Suneel A Narayanavari, Harjeet Singh, Zoltán Ivics. Trends Genet 2017
47
25


A new method for enhancer prediction based on deep belief network.
Hongda Bu, Yanglan Gan, Yang Wang, Shuigeng Zhou, Jihong Guan. BMC Bioinformatics 2017
17
25

The relationship between dlx and gad1 expression indicates highly conserved genetic pathways in the zebrafish forebrain.
Ryan B MacDonald, Mélanie Debiais-Thibaud, Jared Coffin Talbot, Marc Ekker. Dev Dyn 2010
30
25

Genetic labeling of neuronal subsets through enhancer trapping in mice.
Wolfgang Kelsch, Alberto Stolfi, Carlos Lois. PLoS One 2012
12
25

Adaptation of GAL4 activators for GAL4 enhancer trapping in zebrafish.
Eri Ogura, Yuichi Okuda, Hisato Kondoh, Yusuke Kamachi. Dev Dyn 2009
41
25

A chromatin landmark and transcription initiation at most promoters in human cells.
Matthew G Guenther, Stuart S Levine, Laurie A Boyer, Rudolf Jaenisch, Richard A Young. Cell 2007
25

Zebrafish enhancer detection (ZED) vector: a new tool to facilitate transgenesis and the functional analysis of cis-regulatory regions in zebrafish.
José Bessa, Juan J Tena, Elisa de la Calle-Mustienes, Ana Fernández-Miñán, Silvia Naranjo, Almudena Fernández, Lluis Montoliu, Altuna Akalin, Boris Lenhard, Fernando Casares,[...]. Dev Dyn 2009
105
25

Transcriptional Enhancers: Bridging the Genome and Phenome.
Bing Ren, Feng Yue. Cold Spring Harb Symp Quant Biol 2015
12
25



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.