A citation-based method for searching scientific literature

Mohd Amir, Vijay Kumar, Taj Mohammad, Ravins Dohare, Afzal Hussain, Md Tabish Rehman, Perwez Alam, Mohamed F Alajmi, Asimul Islam, Faizan Ahmad, Md Imtaiyaz Hassan. J Cell Biochem 2019
Times Cited: 18







List of co-cited articles
166 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Structural and functional impact of non-synonymous SNPs in the CST complex subunit TEN1: structural genomics approach.
Mohd Amir, Vijay Kumar, Taj Mohammad, Ravins Dohare, Md Tabish Rehman, Mohamed F Alajmi, Afzal Hussain, Faizan Ahmad, Md Imtaiyaz Hassan. Biosci Rep 2019
11
90

Structural Analysis and Conformational Dynamics of STN1 Gene Mutations Involved in Coat Plus Syndrome.
Mohd Amir, Taj Mohammad, Vijay Kumar, Mohammed F Alajmi, Md Tabish Rehman, Afzal Hussain, Perwez Alam, Ravins Dohare, Asimul Islam, Faizan Ahmad,[...]. Front Mol Biosci 2019
16
56


Advancements in Docking and Molecular Dynamics Simulations Towards Ligand-receptor Interactions and Structure-function Relationships.
Ahmad Abu Turab Naqvi, Taj Mohammad, Gulam Mustafa Hasan, Md Imtaiyaz Hassan. Curr Top Med Chem 2018
39
44

Investigating architecture and structure-function relationships in cold shock DNA-binding domain family using structural genomics-based approach.
Mohd Amir, Vijay Kumar, Ravins Dohare, Md Tabish Rehman, Afzal Hussain, Mohamed F Alajmi, Hesham R El-Seedi, Hani Mutlak A Hassan, Asimul Islam, Faizan Ahmad,[...]. Int J Biol Macromol 2019
8
87

Impact of Gln94Glu mutation on the structure and function of protection of telomere 1, a cause of cutaneous familial melanoma.
Mohd Amir, Shahnawaz Ahmad, Shahzaib Ahamad, Vijay Kumar, Taj Mohammad, Ravins Dohare, Mohamed F Alajmi, Tabish Rehman, Afzal Hussain, Asimul Islam,[...]. J Biomol Struct Dyn 2020
13
53

Sequence, structure and evolutionary analysis of cold shock domain proteins, a member of OB fold family.
Mohd Amir, Vijay Kumar, Ravins Dohare, Asimul Islam, Faizan Ahmad, Md Imtaiyaz Hassan. J Evol Biol 2018
12
50


mCSM: predicting the effects of mutations in proteins using graph-based signatures.
Douglas E V Pires, David B Ascher, Tom L Blundell. Bioinformatics 2014
371
33

Molecular mechanism of Ras-related protein Rab-5A and effect of mutations in the catalytically active phosphate-binding loop.
Faez Iqbal Khan, Mohd Aamir, Dong-Qing Wei, Faizan Ahmad, Md Imtaiyaz Hassan. J Biomol Struct Dyn 2017
36
33

Identification and evaluation of bioactive natural products as potential inhibitors of human microtubule affinity-regulating kinase 4 (MARK4).
Taj Mohammad, Faez Iqbal Khan, Kevin A Lobb, Asimul Islam, Faizan Ahmad, Md Imtaiyaz Hassan. J Biomol Struct Dyn 2019
42
33

Nucleic acid recognition by OB-fold proteins.
Douglas L Theobald, Rachel M Mitton-Fry, Deborah S Wuttke. Annu Rev Biophys Biomol Struct 2003
339
27



DynaMut: predicting the impact of mutations on protein conformation, flexibility and stability.
Carlos Hm Rodrigues, Douglas Ev Pires, David B Ascher. Nucleic Acids Res 2018
232
27

Computing disease-linked SOD1 mutations: deciphering protein stability and patient-phenotype relations.
Vijay Kumar, Safikur Rahman, Hani Choudhry, Mazin A Zamzami, Mohammad Sarwar Jamal, Asimul Islam, Faizan Ahmad, Md Imtaiyaz Hassan. Sci Rep 2017
20
27

SDM: a server for predicting effects of mutations on protein stability.
Arun Prasad Pandurangan, Bernardo Ochoa-Montaño, David B Ascher, Tom L Blundell. Nucleic Acids Res 2017
174
27

CUPSAT: prediction of protein stability upon point mutations.
Vijaya Parthiban, M Michael Gromiha, Dietmar Schomburg. Nucleic Acids Res 2006
331
27

How shelterin protects mammalian telomeres.
Wilhelm Palm, Titia de Lange. Annu Rev Genet 2008
27


Investigation of conformational dynamics of Tyr89Cys mutation in protection of telomeres 1 gene associated with familial melanoma.
Mohd Amir, Shahzaib Ahamad, Taj Mohammad, Deeba Shamim Jairajpuri, Gulam Mustafa Hasan, Ravins Dohare, Asimul Islam, Faizan Ahmad, Md Imtaiyaz Hassan. J Biomol Struct Dyn 2021
9
55

A mutation in the POT1 gene is responsible for cardiac angiosarcoma in TP53-negative Li-Fraumeni-like families.
Oriol Calvete, Paula Martinez, Pablo Garcia-Pavia, Carlos Benitez-Buelga, Beatriz Paumard-Hernández, Victoria Fernandez, Fernando Dominguez, Clara Salas, Nuria Romero-Laorden, Jesus Garcia-Donas,[...]. Nat Commun 2015
78
22



Large scale analysis of the mutational landscape in β-glucuronidase: A major player of mucopolysaccharidosis type VII.
Faez Iqbal Khan, Mohd Shahbaaz, Krishna Bisetty, Abdul Waheed, William S Sly, Faizan Ahmad, Md Imtaiyaz Hassan. Gene 2016
51
22

GROMACS: fast, flexible, and free.
David Van Der Spoel, Erik Lindahl, Berk Hess, Gerrit Groenhof, Alan E Mark, Herman J C Berendsen. J Comput Chem 2005
22

Effect of pH on the structure, function, and stability of human calcium/calmodulin-dependent protein kinase IV: combined spectroscopic and MD simulation studies.
Huma Naz, Mohd Shahbaaz, Krishna Bisetty, Asimul Islam, Faizan Ahmad, Md Imtaiyaz Hassan. Biochem Cell Biol 2016
22
22

Binding mechanism of caffeic acid and simvastatin to the integrin linked kinase for therapeutic implications: a comparative docking and MD simulation studies.
Mehak Gulzar, Shahid Ali, Faez Iqbal Khan, Parvez Khan, Pankaj Taneja, Md Imtaiyaz Hassan. J Biomol Struct Dyn 2019
24
22

Mammalian telomeres end in a large duplex loop.
J D Griffith, L Comeau, S Rosenfield, R M Stansel, A Bianchi, H Moss, T de Lange. Cell 1999
22

Human CST promotes telomere duplex replication and general replication restart after fork stalling.
Jason A Stewart, Feng Wang, Mary F Chaiken, Christopher Kasbek, Paul D Chastain, Woodring E Wright, Carolyn M Price. EMBO J 2012
129
22

A review of methods available to estimate solvent-accessible surface areas of soluble proteins in the folded and unfolded states.
Syed Ausaf Ali, Md Imtaiyaz Hassan, Asimul Islam, Faizan Ahmad. Curr Protein Pept Sci 2014
54
22

Structural Features of Nucleoprotein CST/Shelterin Complex Involved in the Telomere Maintenance and Its Association with Disease Mutations.
Mohd Amir, Parvez Khan, Aarfa Queen, Ravins Dohare, Mohamed F Alajmi, Afzal Hussain, Asimul Islam, Faizan Ahmad, Imtaiyaz Hassan. Cells 2020
9
44


The POT1-TPP1 telomere complex is a telomerase processivity factor.
Feng Wang, Elaine R Podell, Arthur J Zaug, Yuting Yang, Paul Baciu, Thomas R Cech, Ming Lei. Nature 2007
456
16

Essential dynamics of proteins.
A Amadei, A B Linssen, H J Berendsen. Proteins 1993
16

Protection of mammalian telomeres.
Titia de Lange. Oncogene 2002
724
16

Human non-synonymous SNPs: server and survey.
Vasily Ramensky, Peer Bork, Shamil Sunyaev. Nucleic Acids Res 2002
16

POT1 mutations cause telomere dysfunction in chronic lymphocytic leukemia.
Andrew J Ramsay, Víctor Quesada, Miguel Foronda, Laura Conde, Alejandra Martínez-Trillos, Neus Villamor, David Rodríguez, Agnieszka Kwarciak, Cecilia Garabaya, Mercedes Gallardo,[...]. Nat Genet 2013
179
16


POT1 loss-of-function variants predispose to familial melanoma.
Carla Daniela Robles-Espinoza, Mark Harland, Andrew J Ramsay, Lauren G Aoude, Víctor Quesada, Zhihao Ding, Karen A Pooley, Antonia L Pritchard, Jessamy C Tiffen, Mia Petljak,[...]. Nat Genet 2014
208
16

Germline mutations in shelterin complex genes are associated with familial glioma.
Matthew N Bainbridge, Georgina N Armstrong, M Monica Gramatges, Alison A Bertuch, Shalini N Jhangiani, Harsha Doddapaneni, Lora Lewis, Joseph Tombrello, Spyros Tsavachidis, Yanhong Liu,[...]. J Natl Cancer Inst 2014
125
16

SIFT: Predicting amino acid changes that affect protein function.
Pauline C Ng, Steven Henikoff. Nucleic Acids Res 2003
16

GdmCl-induced unfolding studies of human carbonic anhydrase IX: a combined spectroscopic and MD simulation approach.
Amresh Prakash, Danish Idrees, Md Anzarul Haque, Asimul Islam, Faizan Ahmad, Md Imtaiyaz Hassan. J Biomol Struct Dyn 2017
19
16

Urea-induced denaturation of human calcium/calmodulin-dependent protein kinase IV: a combined spectroscopic and MD simulation studies.
Huma Naz, Mohd Shahbaaz, Md Anzarul Haque, Krishna Bisetty, Asimul Islam, Faizan Ahmad, Md Imtaiyaz Hassan. J Biomol Struct Dyn 2017
22
16

Curcumin specifically binds to the human calcium-calmodulin-dependent protein kinase IV: fluorescence and molecular dynamics simulation studies.
Nasimul Hoda, Huma Naz, Ehtesham Jameel, Ashutosh Shandilya, Sharmistha Dey, Md Imtaiyaz Hassan, Faizan Ahmad, B Jayaram. J Biomol Struct Dyn 2016
45
16

Estimation of thermodynamic stability of human carbonic anhydrase IX from urea-induced denaturation and MD simulation studies.
Danish Idrees, Safikur Rahman, Mohd Shahbaaz, Md Anzarul Haque, Asimul Islam, Faizan Ahmad, Md Imtaiyaz Hassan. Int J Biol Macromol 2017
13
23

A method and server for predicting damaging missense mutations.
Ivan A Adzhubei, Steffen Schmidt, Leonid Peshkin, Vasily E Ramensky, Anna Gerasimova, Peer Bork, Alexey S Kondrashov, Shamil R Sunyaev. Nat Methods 2010
16

Structure of the TRFH dimerization domain of the human telomeric proteins TRF1 and TRF2.
L Fairall, L Chapman, H Moss, T de Lange, D Rhodes. Mol Cell 2001
152
16


dbSNP: the NCBI database of genetic variation.
S T Sherry, M H Ward, M Kholodov, J Baker, L Phan, E M Smigielski, K Sirotkin. Nucleic Acids Res 2001
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.