A citation-based method for searching scientific literature

Joanna Kufel, Pawel Grzechnik. Trends Genet 2019
Times Cited: 35







List of co-cited articles
336 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Assembly and trafficking of box C/D and H/ACA snoRNPs.
Séverine Massenet, Edouard Bertrand, Céline Verheggen. RNA Biol 2017
72
25

A human snoRNA with microRNA-like functions.
Christine Ender, Azra Krek, Marc R Friedländer, Michaela Beitzinger, Lasse Weinmann, Wei Chen, Sébastien Pfeffer, Nikolaus Rajewsky, Gunter Meister. Mol Cell 2008
540
25

The emerging landscape of small nucleolar RNAs in cell biology.
Fabien Dupuis-Sandoval, Mikaël Poirier, Michelle S Scott. Wiley Interdiscip Rev RNA 2015
119
25

Tuning the ribosome: The influence of rRNA modification on eukaryotic ribosome biogenesis and function.
Katherine E Sloan, Ahmed S Warda, Sunny Sharma, Karl-Dieter Entian, Denis L J Lafontaine, Markus T Bohnsack. RNA Biol 2017
198
25

C/D-box snoRNAs form methylating and non-methylating ribonucleoprotein complexes: Old dogs show new tricks.
Marina Falaleeva, Justin R Welden, Marilyn J Duncan, Stefan Stamm. Bioessays 2017
43
22

Eukaryotic snoRNAs: a paradigm for gene expression flexibility.
Giorgio Dieci, Milena Preti, Barbara Montanini. Genomics 2009
169
22

Dual function of C/D box small nucleolar RNAs in rRNA modification and alternative pre-mRNA splicing.
Marina Falaleeva, Amadis Pages, Zaneta Matuszek, Sana Hidmi, Lily Agranat-Tamir, Konstantin Korotkov, Yuval Nevo, Eduardo Eyras, Ruth Sperling, Stefan Stamm. Proc Natl Acad Sci U S A 2016
86
20

The noncoding RNAs SNORD50A and SNORD50B bind K-Ras and are recurrently deleted in human cancer.
Zurab Siprashvili, Dan E Webster, Danielle Johnston, Rajani M Shenoy, Alexander J Ungewickell, Aparna Bhaduri, Ross Flockhart, Brian J Zarnegar, Yonglu Che, Francesca Meschi,[...]. Nat Genet 2016
87
20

p53 acts as a safeguard of translational control by regulating fibrillarin and rRNA methylation in cancer.
Virginie Marcel, Sandra E Ghayad, Stéphane Belin, Gabriel Therizols, Anne-Pierre Morel, Eduardo Solano-Gonzàlez, Julie A Vendrell, Sabine Hacot, Hichem C Mertani, Marie Alexandra Albaret,[...]. Cancer Cell 2013
147
17

A Pan-cancer Analysis of the Expression and Clinical Relevance of Small Nucleolar RNAs in Human Cancer.
Jing Gong, Yajuan Li, Chun-Jie Liu, Yu Xiang, Chunlai Li, Youqiong Ye, Zhao Zhang, David H Hawke, Peter K Park, Lixia Diao,[...]. Cell Rep 2017
88
17

A SnoRNA-derived piRNA interacts with human interleukin-4 pre-mRNA and induces its decay in nuclear exosomes.
Fudi Zhong, Nan Zhou, Kang Wu, Yubiao Guo, Weiping Tan, Hong Zhang, Xue Zhang, Guannan Geng, Ting Pan, Haihua Luo,[...]. Nucleic Acids Res 2015
54
17

An updated human snoRNAome.
Hadi Jorjani, Stephanie Kehr, Dominik J Jedlinski, Rafal Gumienny, Jana Hertel, Peter F Stadler, Mihaela Zavolan, Andreas R Gruber. Nucleic Acids Res 2016
108
17

Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs.
Z Kiss-László, Y Henry, J P Bachellerie, M Caizergues-Ferrer, T Kiss. Cell 1996
601
17

Functional diversity of small nucleolar RNAs.
Tomaž Bratkovič, Janja Božič, Boris Rogelj. Nucleic Acids Res 2020
25
24

Identification of discrete classes of small nucleolar RNA featuring different ends and RNA binding protein dependency.
Gabrielle Deschamps-Francoeur, Daniel Garneau, Fabien Dupuis-Sandoval, Audrey Roy, Marie Frappier, Mathieu Catala, Sonia Couture, Mélissa Barbe-Marcoux, Sherif Abou-Elela, Michelle S Scott. Nucleic Acids Res 2014
24
20

Long-range function of secreted small nucleolar RNAs that direct 2'-O-methylation.
Jamie M Rimer, Jiyeon Lee, Christopher L Holley, Robert J Crowder, Delphine L Chen, Phyllis I Hanson, Daniel S Ory, Jean E Schaffer. J Biol Chem 2018
21
23

Dynamic RNA Modifications in Gene Expression Regulation.
Ian A Roundtree, Molly E Evans, Tao Pan, Chuan He. Cell 2017
813
14

Evidence for rRNA 2'-O-methylation plasticity: Control of intrinsic translational capabilities of human ribosomes.
Jenny Erales, Virginie Marchand, Baptiste Panthu, Sandra Gillot, Stéphane Belin, Sandra E Ghayad, Maxime Garcia, Florian Laforêts, Virginie Marcel, Agnès Baudin-Baillieu,[...]. Proc Natl Acad Sci U S A 2017
94
14


Small RNAs derived from snoRNAs.
Ryan J Taft, Evgeny A Glazov, Timo Lassmann, Yoshihide Hayashizaki, Piero Carninci, John S Mattick. RNA 2009
293
14

Human box C/D snoRNAs with miRNA like functions: expanding the range of regulatory RNAs.
Markus Brameier, Astrid Herwig, Richard Reinhardt, Lutz Walter, Jens Gruber. Nucleic Acids Res 2011
200
14

RNA modification in Cajal bodies.
U Thomas Meier. RNA Biol 2017
37
14

Elevated snoRNA biogenesis is essential in breast cancer.
H Su, T Xu, S Ganapathy, M Shadfan, M Long, T H-M Huang, I Thompson, Z-M Yuan. Oncogene 2014
105
14

A snoRNA modulates mRNA 3' end processing and regulates the expression of a subset of mRNAs.
Chunliu Huang, Junjie Shi, Yibin Guo, Weijun Huang, Shanshan Huang, Siqi Ming, Xingui Wu, Rui Zhang, Junjun Ding, Wei Zhao,[...]. Nucleic Acids Res 2017
34
14

Global Mapping of Human RNA-RNA Interactions.
Eesha Sharma, Tim Sterne-Weiler, Dave O'Hanlon, Benjamin J Blencowe. Mol Cell 2016
161
14



The expanding snoRNA world.
Jean Pierre Bachellerie, Jérôme Cavaillé, Alexander Hüttenhofer. Biochimie 2002
446
11

Transcriptome-wide mapping reveals widespread dynamic-regulated pseudouridylation of ncRNA and mRNA.
Schraga Schwartz, Douglas A Bernstein, Maxwell R Mumbach, Marko Jovanovic, Rebecca H Herbst, Brian X León-Ricardo, Jesse M Engreitz, Mitchell Guttman, Rahul Satija, Eric S Lander,[...]. Cell 2014
433
11

TRBP recruits the Dicer complex to Ago2 for microRNA processing and gene silencing.
Thimmaiah P Chendrimada, Richard I Gregory, Easwari Kumaraswamy, Jessica Norman, Neil Cooch, Kazuko Nishikura, Ramin Shiekhattar. Nature 2005
11


Profiling of 2'-O-Me in human rRNA reveals a subset of fractionally modified positions and provides evidence for ribosome heterogeneity.
Nicolai Krogh, Martin D Jansson, Sophia J Häfner, Disa Tehler, Ulf Birkedal, Mikkel Christensen-Dalsgaard, Anders H Lund, Henrik Nielsen. Nucleic Acids Res 2016
113
11

A common core RNP structure shared between the small nucleoar box C/D RNPs and the spliceosomal U4 snRNP.
N J Watkins, V Ségault, B Charpentier, S Nottrott, P Fabrizio, A Bachi, M Wilm, M Rosbash, C Branlant, R Lührmann. Cell 2000
269
11

From snoRNA to miRNA: Dual function regulatory non-coding RNAs.
Michelle S Scott, Motoharu Ono. Biochimie 2011
144
11

The snoRNA MBII-52 (SNORD 115) is processed into smaller RNAs and regulates alternative splicing.
Shivendra Kishore, Amit Khanna, Zhaiyi Zhang, Jingyi Hui, Piotr J Balwierz, Mihaela Stefan, Carol Beach, Robert D Nicholls, Mihaela Zavolan, Stefan Stamm. Hum Mol Genet 2010
183
11

Implication of snoRNA U50 in human breast cancer.
Xue-Yuan Dong, Peng Guo, Jeff Boyd, Xiaodong Sun, Qunna Li, Wei Zhou, Jin-Tang Dong. J Genet Genomics 2009
135
11

SnoRNA U50 is a candidate tumor-suppressor gene at 6q14.3 with a mutation associated with clinically significant prostate cancer.
Xue-Yuan Dong, Carmen Rodriguez, Peng Guo, Xiaodong Sun, Jeffrey T Talbot, Wei Zhou, John Petros, Qunna Li, Robert L Vessella, Adam S Kibel,[...]. Hum Mol Genet 2008
136
11

snoRNA-LBME-db, a comprehensive database of human H/ACA and C/D box snoRNAs.
Laurent Lestrade, Michel J Weber. Nucleic Acids Res 2006
339
11

Small Nucleolar RNAs: Insight Into Their Function in Cancer.
Junnan Liang, Jingyuan Wen, Zhao Huang, Xiao-Ping Chen, Bi-Xiang Zhang, Liang Chu. Front Oncol 2019
47
11

A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis.
François Dragon, Jennifer E G Gallagher, Patricia A Compagnone-Post, Brianna M Mitchell, Kara A Porwancher, Karen A Wehner, Steven Wormsley, Robert E Settlage, Jeffrey Shabanowitz, Yvonne Osheim,[...]. Nature 2002
506
11


Cytosolic accumulation of small nucleolar RNAs (snoRNAs) is dynamically regulated by NADPH oxidase.
Christopher L Holley, Melissa W Li, Benjamin S Scruggs, Scot J Matkovich, Daniel S Ory, Jean E Schaffer. J Biol Chem 2015
39
11

Expression profiling of snoRNAs in normal hematopoiesis and AML.
Wayne A Warner, David H Spencer, Maria Trissal, Brian S White, Nichole Helton, Timothy J Ley, Daniel C Link. Blood Adv 2018
12
33

snoDB: an interactive database of human snoRNA sequences, abundance and interactions.
Philia Bouchard-Bourelle, Clément Desjardins-Henri, Darren Mathurin-St-Pierre, Gabrielle Deschamps-Francoeur, Étienne Fafard-Couture, Jean-Michel Garant, Sherif Abou Elela, Michelle S Scott. Nucleic Acids Res 2020
16
25

Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing.
Shivendra Kishore, Andreas R Gruber, Dominik J Jedlinski, Afzal P Syed, Hadi Jorjani, Mihaela Zavolan. Genome Biol 2013
73
11

Human nonsense-mediated RNA decay initiates widely by endonucleolysis and targets snoRNA host genes.
Søren Lykke-Andersen, Yun Chen, Britt R Ardal, Berit Lilje, Johannes Waage, Albin Sandelin, Torben Heick Jensen. Genes Dev 2014
97
11


Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq.
Dan Dominissini, Sharon Moshitch-Moshkovitz, Schraga Schwartz, Mali Salmon-Divon, Lior Ungar, Sivan Osenberg, Karen Cesarkas, Jasmine Jacob-Hirsch, Ninette Amariglio, Martin Kupiec,[...]. Nature 2012
8

Small RNAs with big implications: new insights into H/ACA snoRNA function and their role in human disease.
Mary McMahon, Adrian Contreras, Davide Ruggero. Wiley Interdiscip Rev RNA 2015
71
8

Hypothalamic loss of Snord116 recapitulates the hyperphagia of Prader-Willi syndrome.
Joseph Polex-Wolf, Brian Yh Lam, Rachel Larder, John Tadross, Debra Rimmington, Fàtima Bosch, Verónica Jiménez Cenzano, Eduard Ayuso, Marcella Kl Ma, Kara Rainbow,[...]. J Clin Invest 2018
38
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.