A citation-based method for searching scientific literature

Craig P Hersh, Ian M Adcock, Juan C Celedón, Michael H Cho, David C Christiani, Blanca E Himes, Naftali Kaminski, Rasika A Mathias, Deborah A Meyers, John Quackenbush, Susan Redline, Katrina A Steiling, Holly K Tabor, Martin D Tobin, Mark M Wurfel, Ivana V Yang, Gerard H Koppelman. Ann Am Thorac Soc 2019
Times Cited: 5







List of co-cited articles
3 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Using omics approaches to understand pulmonary diseases.
Mengyuan Kan, Maya Shumyatcher, Blanca E Himes. Respir Res 2017
47
40

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
40

Coverage recommendations for methylation analysis by whole-genome bisulfite sequencing.
Michael J Ziller, Kasper D Hansen, Alexander Meissner, Martin J Aryee. Nat Methods 2015
135
40


PDE8 Is Expressed in Human Airway Smooth Muscle and Selectively Regulates cAMP Signaling by β2-Adrenergic Receptors and Adenylyl Cyclase 6.
Timothy B Johnstone, Kaitlyn H Smith, Cynthia J Koziol-White, Fengying Li, Austin G Kazarian, Maia L Corpuz, Maya Shumyatcher, Frederick J Ehlert, Blanca E Himes, Reynold A Panettieri,[...]. Am J Respir Cell Mol Biol 2018
24
20

Assays for in vitro monitoring of proliferation of human airway smooth muscle (ASM) and human pulmonary arterial vascular smooth muscle (VSM) cells.
Elena A Goncharova, Poay Lim, Dmitry A Goncharov, Andrew Eszterhas, Reynold A Panettieri, Vera P Krymskaya. Nat Protoc 2006
19
20


Vitamin D Modulates Expression of the Airway Smooth Muscle Transcriptome in Fatal Asthma.
Blanca E Himes, Cynthia Koziol-White, Martin Johnson, Christina Nikolos, William Jester, Barbara Klanderman, Augusto A Litonjua, Kelan G Tantisira, Kevin Truskowski, Kevin MacDonald,[...]. PLoS One 2015
22
20

A Severe Asthma Disease Signature from Gene Expression Profiling of Peripheral Blood from U-BIOPRED Cohorts.
Jeannette Bigler, Michael Boedigheimer, James P R Schofield, Paul J Skipp, Julie Corfield, Anthony Rowe, Ana R Sousa, Martin Timour, Lori Twehues, Xuguang Hu,[...]. Am J Respir Crit Care Med 2017
81
20

Asthma.
Christopher H Fanta. N Engl J Med 2009
299
20


Vitamin D inhibits growth of human airway smooth muscle cells through growth factor-induced phosphorylation of retinoblastoma protein and checkpoint kinase 1.
G Damera, H W Fogle, P Lim, E A Goncharova, H Zhao, A Banerjee, O Tliba, V P Krymskaya, R A Panettieri. Br J Pharmacol 2009
105
20

Gene Expression Correlated with Severe Asthma Characteristics Reveals Heterogeneous Mechanisms of Severe Disease.
Brian D Modena, Eugene R Bleecker, William W Busse, Serpil C Erzurum, Benjamin M Gaston, Nizar N Jarjour, Deborah A Meyers, Jadranka Milosevic, John R Tedrow, Wei Wu,[...]. Am J Respir Crit Care Med 2017
72
20

A comparison of the airway response to segmental antigen bronchoprovocation in atopic asthma and allergic rhinitis.
Elizabeth A Becky Kelly, William W Busse, Nizar N Jarjour. J Allergy Clin Immunol 2003
72
20

Genomic determination of the glucocorticoid response reveals unexpected mechanisms of gene regulation.
Timothy E Reddy, Florencia Pauli, Rebekka O Sprouse, Norma F Neff, Kimberly M Newberry, Michael J Garabedian, Richard M Myers. Genome Res 2009
337
20

Improvement in bronchodilation following deep inspiration after a course of high-dose oral prednisone in asthma.
Annelies M Slats, Jacob K Sont, Rik H C J van Klink, Elisabeth H D Bel, Peter J Sterk. Chest 2006
18
20

Circadian rhythms in the CNS and peripheral clock disorders: function of clock genes: influence of medication for bronchial asthma on circadian gene.
Naoto Burioka, Yasushi Fukuoka, Miyako Takata, Masahiro Endo, Masanori Miyata, Hiroki Chikumi, Katsuyuki Tomita, Masahiro Kodani, Hirokazu Touge, Kenichi Takeda,[...]. J Pharmacol Sci 2007
33
20


Disease-Specific Integration of Omics Data to Guide Functional Validation of Genetic Associations.
Maya Shumyatcher, Rui Hong, Jessica Levin, Blanca E Himes. AMIA Annu Symp Proc 2018
4
25

Expression profiling identifies Klf15 as a glucocorticoid target that regulates airway hyperresponsiveness.
Kiriko Masuno, Saptarsi M Haldar, Darwin Jeyaraj, Christina M Mailloux, Xiaozhu Huang, Rey A Panettieri, Mukesh K Jain, Anthony N Gerber. Am J Respir Cell Mol Biol 2011
45
20



PMEL Amyloid Fibril Formation: The Bright Steps of Pigmentation.
Christin Bissig, Leila Rochin, Guillaume van Niel. Int J Mol Sci 2016
43
20

Steroids augment relengthening of contracted airway smooth muscle: potential additional mechanism of benefit in asthma.
O J Lakser, M L Dowell, F L Hoyte, B Chen, T L Lavoie, C Ferreira, L H Pinto, N O Dulin, P Kogut, J Churchill,[...]. Eur Respir J 2008
22
20

Glucocorticoid- and protein kinase A-dependent transcriptome regulation in airway smooth muscle.
Anna M Misior, Deepak A Deshpande, Matthew J Loza, Rodolfo M Pascual, Jason D Hipp, Raymond B Penn. Am J Respir Cell Mol Biol 2009
31
20

RNA-Seq transcriptome profiling identifies CRISPLD2 as a glucocorticoid responsive gene that modulates cytokine function in airway smooth muscle cells.
Blanca E Himes, Xiaofeng Jiang, Peter Wagner, Ruoxi Hu, Qiyu Wang, Barbara Klanderman, Reid M Whitaker, Qingling Duan, Jessica Lasky-Su, Christina Nikolos,[...]. PLoS One 2014
77
20

The anti-inflammatory effect of glucocorticoids is mediated by glucocorticoid-induced leucine zipper in epithelial cells.
Jane Eddleston, Jack Herschbach, Amy L Wagelie-Steffen, Sandra C Christiansen, Bruce L Zuraw. J Allergy Clin Immunol 2007
121
20

Chaperoning of glucocorticoid receptors.
W B Pratt, Y Morishima, M Murphy, M Harrell. Handb Exp Pharmacol 2006
140
20

Regulation of beta-adrenergic responses in airway smooth muscle.
Stephanie A Shore, Paul E Moore. Respir Physiol Neurobiol 2003
62
20

Cholecystokinin-From Local Gut Hormone to Ubiquitous Messenger.
Jens F Rehfeld. Front Endocrinol (Lausanne) 2017
79
20

Trends in asthma prevalence, health care use, and mortality in the United States, 2001-2010.
Lara J Akinbami, Jeanne E Moorman, Cathy Bailey, Hatice S Zahran, Michele King, Carol A Johnson, Xiang Liu. NCHS Data Brief 2012
588
20

Glucocorticoid Receptor ChIP-Seq Identifies PLCD1 as a KLF15 Target that Represses Airway Smooth Muscle Hypertrophy.
Sarah K Sasse, Vineela Kadiyala, Thomas Danhorn, Reynold A Panettieri, Tzu L Phang, Anthony N Gerber. Am J Respir Cell Mol Biol 2017
15
20

Time course of inflammatory and remodeling events in a murine model of asthma: effect of steroid treatment.
A Trifilieff, A El-Hashim, C Bertrand. Am J Physiol Lung Cell Mol Physiol 2000
130
20

Glucocorticoids.
Ian M Adcock, Sharon Mumby. Handb Exp Pharmacol 2017
34
20


Glucocorticoid sensitivity in health and disease.
Rogier A Quax, Laura Manenschijn, Jan W Koper, Johanna M Hazes, Steven W J Lamberts, Elisabeth F C van Rossum, Richard A Feelders. Nat Rev Endocrinol 2013
157
20

Corticosteroid-induced gene expression in allergen-challenged asthmatic subjects taking inhaled budesonide.
M M Kelly, E M King, C F Rider, C Gwozd, N S Holden, J Eddleston, B Zuraw, R Leigh, P M O'Byrne, R Newton. Br J Pharmacol 2012
65
20

Glucocorticoid-induced changes in gene expression of airway smooth muscle in patients with asthma.
Ching Yong Yick, Aeilko H Zwinderman, Peter W Kunst, Katrien Grünberg, Thais Mauad, Kees Fluiter, Elisabeth H Bel, René Lutter, Frank Baas, Peter J Sterk. Am J Respir Crit Care Med 2013
42
20

Widespread negative response elements mediate direct repression by agonist-liganded glucocorticoid receptor.
Milan Surjit, Krishna Priya Ganti, Atish Mukherji, Tao Ye, Guoqiang Hua, Daniel Metzger, Mei Li, Pierre Chambon. Cell 2011
321
20

Glucocorticoid receptor isoforms generate transcription specificity.
Nick Z Lu, John A Cidlowski. Trends Cell Biol 2006
156
20




20-HETE mediates ozone-induced, neutrophil-independent airway hyper-responsiveness in mice.
Philip R Cooper, A Clementina Mesaros, Jie Zhang, Peter Christmas, Christopher M Stark, Karim Douaidy, Michael A Mittelman, Roy J Soberman, Ian A Blair, Reynold A Panettieri. PLoS One 2010
34
20

A human airway smooth muscle cell line that retains physiological responsiveness.
R A Panettieri, R K Murray, L R DePalo, P A Yadvish, M I Kotlikoff. Am J Physiol 1989
279
20

Differential induction of CD38 expression by TNF-{alpha} in asthmatic airway smooth muscle cells.
Joseph A Jude, Julian Solway, Reynold A Panettieri, Timothy F Walseth, Mathur S Kannan. Am J Physiol Lung Cell Mol Physiol 2010
29
20


Airway Mucin Concentration as a Marker of Chronic Bronchitis.
Mehmet Kesimer, Amina A Ford, Agathe Ceppe, Giorgia Radicioni, Rui Cao, C William Davis, Claire M Doerschuk, Neil E Alexis, Wayne H Anderson, Ashley G Henderson,[...]. N Engl J Med 2017
140
20

Senescence-associated secretory phenotype and its possible role in chronic obstructive pulmonary disease.
Manish Kumar, Werner Seeger, Robert Voswinckel. Am J Respir Cell Mol Biol 2014
64
20

Inflammation and necrosis promote tumour growth.
Jukka Vakkila, Michael T Lotze. Nat Rev Immunol 2004
442
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.