A citation-based method for searching scientific literature

Huiling Hong, Alex Chun Koon, Zhefan Stephen Chen, Yuming Wei, Ying An, Wen Li, Matthew Ho Yan Lau, Kwok-Fai Lau, Jacky Chi Ki Ngo, Chun-Ho Wong, Ho Yu Au-Yeung, Steven C Zimmerman, Ho Yin Edwin Chan. J Biol Chem 2019
Times Cited: 7







List of co-cited articles
78 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Polyglutamine Repeats in Neurodegenerative Diseases.
Andrew P Lieberman, Vikram G Shakkottai, Roger L Albin. Annu Rev Pathol 2019
64
42

Targeting toxic RNAs that cause myotonic dystrophy type 1 (DM1) with a bisamidinium inhibitor.
Chun-Ho Wong, Lien Nguyen, Jessie Peh, Long M Luu, Jeannette S Sanchez, Stacie L Richardson, Tiziano Tuccinardi, Ho Tsoi, Wood Yee Chan, H Y Edwin Chan,[...]. J Am Chem Soc 2014
61
28

Rationally designed small molecules that target both the DNA and RNA causing myotonic dystrophy type 1.
Lien Nguyen, Long M Luu, Shaohong Peng, Julio F Serrano, H Y Edwin Chan, Steven C Zimmerman. J Am Chem Soc 2015
62
28

A Potent Inhibitor of Protein Sequestration by Expanded Triplet (CUG) Repeats that Shows Phenotypic Improvements in a Drosophila Model of Myotonic Dystrophy.
Long M Luu, Lien Nguyen, Shaohong Peng, JuYeon Lee, Hyang Yeon Lee, Chun-Ho Wong, Paul J Hergenrother, H Y Edwin Chan, Steven C Zimmerman. ChemMedChem 2016
22
28

Quantitative proteomics identifies NCOA4 as the cargo receptor mediating ferritinophagy.
Joseph D Mancias, Xiaoxu Wang, Steven P Gygi, J Wade Harper, Alec C Kimmelman. Nature 2014
502
28

Trehalose reverses cell malfunction in fibroblasts from normal and Huntington's disease patients caused by proteosome inhibition.
Maria Angeles Fernandez-Estevez, Maria Jose Casarejos, Jose López Sendon, Juan Garcia Caldentey, Carolina Ruiz, Ana Gomez, Juan Perucho, Justo García de Yebenes, Maria Angeles Mena. PLoS One 2014
35
28

A gene network regulating lysosomal biogenesis and function.
Marco Sardiello, Michela Palmieri, Alberto di Ronza, Diego Luis Medina, Marta Valenza, Vincenzo Alessandro Gennarino, Chiara Di Malta, Francesca Donaudy, Valerio Embrione, Roman S Polishchuk,[...]. Science 2009
28

Phosphorylation of NBR1 by GSK3 modulates protein aggregation.
Anne-Sophie Nicot, Francesca Lo Verso, Francesca Ratti, Fanny Pilot-Storck, Nathalie Streichenberger, Marco Sandri, Laurent Schaeffer, Evelyne Goillot. Autophagy 2014
31
28

A ubiquitin-like system mediates protein lipidation.
Y Ichimura, T Kirisako, T Takao, Y Satomi, Y Shimonishi, N Ishihara, N Mizushima, I Tanida, E Kominami, M Ohsumi,[...]. Nature 2000
28

Toll-interacting protein deficiency promotes neurodegeneration via impeding autophagy completion in high-fat diet-fed ApoE-/- mouse model.
Keqiang Chen, Ruoxi Yuan, Shuo Geng, Yao Zhang, Taojing Ran, Elizabeth Kowalski, Jingze Liu, Liwu Li. Brain Behav Immun 2017
18
28

Autophagy in immunity and inflammation.
Beth Levine, Noboru Mizushima, Herbert W Virgin. Nature 2011
28

Inhibition of PIP4Kγ ameliorates the pathological effects of mutant huntingtin protein.
Ismael Al-Ramahi, Sai Srinivas Panapakkam Giridharan, Yu-Chi Chen, Samarjit Patnaik, Nathaniel Safren, Junya Hasegawa, Maria de Haro, Amanda K Wagner Gee, Steven A Titus, Hyunkyung Jeong,[...]. Elife 2017
24
28

Parkin is recruited selectively to impaired mitochondria and promotes their autophagy.
Derek Narendra, Atsushi Tanaka, Der-Fen Suen, Richard J Youle. J Cell Biol 2008
28

A protein conjugation system essential for autophagy.
N Mizushima, T Noda, T Yoshimori, Y Tanaka, T Ishii, M D George, D J Klionsky, M Ohsumi, Y Ohsumi. Nature 1998
28

Nix is a selective autophagy receptor for mitochondrial clearance.
Ivana Novak, Vladimir Kirkin, David G McEwan, Ji Zhang, Philipp Wild, Alexis Rozenknop, Vladimir Rogov, Frank Löhr, Doris Popovic, Angelo Occhipinti,[...]. EMBO Rep 2010
750
28

Spatiotemporal Control of ULK1 Activation by NDP52 and TBK1 during Selective Autophagy.
Jose Norberto S Vargas, Chunxin Wang, Eric Bunker, Ling Hao, Dragan Maric, Giampietro Schiavo, Felix Randow, Richard J Youle. Mol Cell 2019
135
28

Alfy, a novel FYVE-domain-containing protein associated with protein granules and autophagic membranes.
Anne Simonsen, Hanne C G Birkeland, David J Gillooly, Noboru Mizushima, Akiko Kuma, Tamotsu Yoshimori, Thomas Slagsvold, Andreas Brech, Harald Stenmark. J Cell Sci 2004
209
28

Autophagy modulation as a potential therapeutic target for diverse diseases.
David C Rubinsztein, Patrice Codogno, Beth Levine. Nat Rev Drug Discov 2012
954
28

p62/SQSTM1 binds directly to Atg8/LC3 to facilitate degradation of ubiquitinated protein aggregates by autophagy.
Serhiy Pankiv, Terje Høyvarde Clausen, Trond Lamark, Andreas Brech, Jack-Ansgar Bruun, Heidi Outzen, Aud Øvervatn, Geir Bjørkøy, Terje Johansen. J Biol Chem 2007
28


ULK1-mediated phosphorylation of ATG14 promotes autophagy and is impaired in Huntington's disease models.
Mitchell S Wold, Junghyun Lim, Véronik Lachance, Zhiqiang Deng, Zhenyu Yue. Mol Neurodegener 2016
51
28

The TBK1 adaptor and autophagy receptor NDP52 restricts the proliferation of ubiquitin-coated bacteria.
Teresa L M Thurston, Grigory Ryzhakov, Stuart Bloor, Natalia von Muhlinen, Felix Randow. Nat Immunol 2009
578
28

The HOPS complex mediates autophagosome-lysosome fusion through interaction with syntaxin 17.
Peidu Jiang, Taki Nishimura, Yuriko Sakamaki, Eisuke Itakura, Tomohisa Hatta, Tohru Natsume, Noboru Mizushima. Mol Biol Cell 2014
251
28


What is the advantage of a transient precursor in autophagosome biogenesis?
Nicholas T Ktistakis, Simon Andrews, Joshua Long. Autophagy 2011
444
28

PINK1/Parkin-mediated mitophagy is dependent on VDAC1 and p62/SQSTM1.
Sven Geisler, Kira M Holmström, Diana Skujat, Fabienne C Fiesel, Oliver C Rothfuss, Philipp J Kahle, Wolfdieter Springer. Nat Cell Biol 2010
28

Cytoplasmic DAXX drives SQSTM1/p62 phase condensation to activate Nrf2-mediated stress response.
Yi Yang, Thea L Willis, Robert W Button, Conor J Strang, Yuhua Fu, Xue Wen, Portia R C Grayson, Tracey Evans, Rebecca J Sipthorpe, Sheridan L Roberts,[...]. Nat Commun 2019
29
28

A striatal-enriched intronic GPCR modulates huntingtin levels and toxicity.
Yuwei Yao, Xiaotian Cui, Ismael Al-Ramahi, Xiaoli Sun, Bo Li, Jiapeng Hou, Marian Difiglia, James Palacino, Zhi-Ying Wu, Lixiang Ma,[...]. Elife 2015
44
28


Loss of autophagy in the central nervous system causes neurodegeneration in mice.
Masaaki Komatsu, Satoshi Waguri, Tomoki Chiba, Shigeo Murata, Jun-ichi Iwata, Isei Tanida, Takashi Ueno, Masato Koike, Yasuo Uchiyama, Eiki Kominami,[...]. Nature 2006
28

A role for NBR1 in autophagosomal degradation of ubiquitinated substrates.
Vladimir Kirkin, Trond Lamark, Yu-Shin Sou, Geir Bjørkøy, Jennifer L Nunn, Jack-Ansgar Bruun, Elena Shvets, David G McEwan, Terje H Clausen, Philipp Wild,[...]. Mol Cell 2009
729
28

TFEB-mediated autophagy rescues midbrain dopamine neurons from α-synuclein toxicity.
Mickael Decressac, Bengt Mattsson, Pia Weikop, Martin Lundblad, Johan Jakobsson, Anders Björklund. Proc Natl Acad Sci U S A 2013
387
28

Structural insights into the ubiquitin recognition by OPTN (optineurin) and its regulation by TBK1-mediated phosphorylation.
Faxiang Li, Daichao Xu, Yingli Wang, Zixuan Zhou, Jianping Liu, Shichen Hu, Yukang Gong, Junying Yuan, Lifeng Pan. Autophagy 2018
45
28

TBK-1 promotes autophagy-mediated antimicrobial defense by controlling autophagosome maturation.
Manohar Pilli, John Arko-Mensah, Marisa Ponpuak, Esteban Roberts, Sharon Master, Michael A Mandell, Nicolas Dupont, Wojciech Ornatowski, Shanya Jiang, Steven B Bradfute,[...]. Immunity 2012
378
28

Serine 403 phosphorylation of p62/SQSTM1 regulates selective autophagic clearance of ubiquitinated proteins.
Gen Matsumoto, Koji Wada, Misako Okuno, Masaru Kurosawa, Nobuyuki Nukina. Mol Cell 2011
394
28

Autophagy receptors link myosin VI to autophagosomes to mediate Tom1-dependent autophagosome maturation and fusion with the lysosome.
David A Tumbarello, Bennett J Waxse, Susan D Arden, Nicholas A Bright, John Kendrick-Jones, Folma Buss. Nat Cell Biol 2012
180
28

Aggregate-prone proteins with polyglutamine and polyalanine expansions are degraded by autophagy.
Brinda Ravikumar, Rainer Duden, David C Rubinsztein. Hum Mol Genet 2002
817
28

PGC-1α rescues Huntington's disease proteotoxicity by preventing oxidative stress and promoting TFEB function.
Taiji Tsunemi, Travis D Ashe, Bradley E Morrison, Kathryn R Soriano, Jonathan Au, Ruben A Vázquez Roque, Eduardo R Lazarowski, Vincent A Damian, Eliezer Masliah, Albert R La Spada. Sci Transl Med 2012
279
28

Ubiquitin-independent function of optineurin in autophagic clearance of protein aggregates.
Jelena Korac, Veronique Schaeffer, Igor Kovacevic, Albrecht M Clement, Benno Jungblut, Christian Behl, Janos Terzic, Ivan Dikic. J Cell Sci 2013
199
28

Listeria monocytogenes ActA-mediated escape from autophagic recognition.
Yuko Yoshikawa, Michinaga Ogawa, Torsten Hain, Mitsutaka Yoshida, Makoto Fukumatsu, Minsoo Kim, Hitomi Mimuro, Ichiro Nakagawa, Toru Yanagawa, Tetsuro Ishii,[...]. Nat Cell Biol 2009
297
28

Autophagy induction and autophagosome clearance in neurons: relationship to autophagic pathology in Alzheimer's disease.
Barry Boland, Asok Kumar, Sooyeon Lee, Frances M Platt, Jerzy Wegiel, W Haung Yu, Ralph A Nixon. J Neurosci 2008
724
28


Trehalose induces autophagy via lysosomal-mediated TFEB activation in models of motoneuron degeneration.
Paola Rusmini, Katia Cortese, Valeria Crippa, Riccardo Cristofani, Maria Elena Cicardi, Veronica Ferrari, Giulia Vezzoli, Barbara Tedesco, Marco Meroni, Elio Messi,[...]. Autophagy 2019
87
28

Accumulation of autophagic vacuoles and cardiomyopathy in LAMP-2-deficient mice.
Y Tanaka, G Guhde, A Suter, E L Eskelinen, D Hartmann, R Lüllmann-Rauch, P M Janssen, J Blanz, K von Figura, P Saftig. Nature 2000
654
28

p62/SQSTM1 forms protein aggregates degraded by autophagy and has a protective effect on huntingtin-induced cell death.
Geir Bjørkøy, Trond Lamark, Andreas Brech, Heidi Outzen, Maria Perander, Aud Overvatn, Harald Stenmark, Terje Johansen. J Cell Biol 2005
28

Allele-selective lowering of mutant HTT protein by HTT-LC3 linker compounds.
Zhaoyang Li, Cen Wang, Ziying Wang, Chenggang Zhu, Jie Li, Tian Sha, Lixiang Ma, Chao Gao, Yi Yang, Yimin Sun,[...]. Nature 2019
70
28

LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing.
Y Kabeya, N Mizushima, T Ueno, A Yamamoto, T Kirisako, T Noda, E Kominami, Y Ohsumi, T Yoshimori. EMBO J 2000
28

The adaptor protein p62/SQSTM1 targets invading bacteria to the autophagy pathway.
Yiyu T Zheng, Shahab Shahnazari, Andreas Brech, Trond Lamark, Terje Johansen, John H Brumell. J Immunol 2009
380
28

The role of the Atg1/ULK1 complex in autophagy regulation.
Noboru Mizushima. Curr Opin Cell Biol 2010
679
28

Phosphorylation of OPTN by TBK1 enhances its binding to Ub chains and promotes selective autophagy of damaged mitochondria.
Benjamin Richter, Danielle A Sliter, Lina Herhaus, Alexandra Stolz, Chunxin Wang, Petra Beli, Gabriele Zaffagnini, Philipp Wild, Sascha Martens, Sebastian A Wagner,[...]. Proc Natl Acad Sci U S A 2016
327
28


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.