A citation-based method for searching scientific literature

Zhe Feng, Xudong Chen, Menglong Zeng, Mingjie Zhang. Curr Opin Neurobiol 2019
Times Cited: 35







List of co-cited articles
318 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Phase Transition in Postsynaptic Densities Underlies Formation of Synaptic Complexes and Synaptic Plasticity.
Menglong Zeng, Yuan Shang, Yoichi Araki, Tingfeng Guo, Richard L Huganir, Mingjie Zhang. Cell 2016
259
48

Reconstituted Postsynaptic Density as a Molecular Platform for Understanding Synapse Formation and Plasticity.
Menglong Zeng, Xudong Chen, Dongshi Guan, Jia Xu, Haowei Wu, Penger Tong, Mingjie Zhang. Cell 2018
173
45

Biomolecular condensates: organizers of cellular biochemistry.
Salman F Banani, Hyun O Lee, Anthony A Hyman, Michael K Rosen. Nat Rev Mol Cell Biol 2017
45

A liquid phase of synapsin and lipid vesicles.
Dragomir Milovanovic, Yumei Wu, Xin Bian, Pietro De Camilli. Science 2018
204
28

Phase transitions in the assembly of multivalent signalling proteins.
Pilong Li, Sudeep Banjade, Hui-Chun Cheng, Soyeon Kim, Baoyu Chen, Liang Guo, Marc Llaguno, Javoris V Hollingsworth, David S King, Salman F Banani,[...]. Nature 2012
28

Liquid phase condensation in cell physiology and disease.
Yongdae Shin, Clifford P Brangwynne. Science 2017
28

RIM and RIM-BP Form Presynaptic Active-Zone-like Condensates via Phase Separation.
Xiandeng Wu, Qixu Cai, Zeyu Shen, Xudong Chen, Menglong Zeng, Shengwang Du, Mingjie Zhang. Mol Cell 2019
95
22

A trans-synaptic nanocolumn aligns neurotransmitter release to receptors.
Ai-Hui Tang, Haiwen Chen, Tuo P Li, Sarah R Metzbower, Harold D MacGillavry, Thomas A Blanpied. Nature 2016
324
20

Phase separation at the synapse.
Xudong Chen, Xiandeng Wu, Haowei Wu, Mingjie Zhang. Nat Neurosci 2020
74
20


The postsynaptic density proteins Homer and Shank form a polymeric network structure.
Mariko Kato Hayashi, Chunyan Tang, Chiara Verpelli, Radhakrishnan Narayanan, Marissa H Stearns, Rui-Ming Xu, Huilin Li, Carlo Sala, Yasunori Hayashi. Cell 2009
248
17

Super-resolution imaging reveals that AMPA receptors inside synapses are dynamically organized in nanodomains regulated by PSD95.
Deepak Nair, Eric Hosy, Jennifer D Petersen, Audrey Constals, Gregory Giannone, Daniel Choquet, Jean-Baptiste Sibarita. J Neurosci 2013
360
17


Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels.
Masato Kato, Tina W Han, Shanhai Xie, Kevin Shi, Xinlin Du, Leeju C Wu, Hamid Mirzaei, Elizabeth J Goldsmith, Jamie Longgood, Jimin Pei,[...]. Cell 2012
17

Phase separation by low complexity domains promotes stress granule assembly and drives pathological fibrillization.
Amandine Molliex, Jamshid Temirov, Jihun Lee, Maura Coughlin, Anderson P Kanagaraj, Hong Joo Kim, Tanja Mittag, J Paul Taylor. Cell 2015
17

Stoichiometry controls activity of phase-separated clusters of actin signaling proteins.
Lindsay B Case, Xu Zhang, Jonathon A Ditlev, Michael K Rosen. Science 2019
199
17

Phase separation of signaling molecules promotes T cell receptor signal transduction.
Xiaolei Su, Jonathon A Ditlev, Enfu Hui, Wenmin Xing, Sudeep Banjade, Julia Okrut, David S King, Jack Taunton, Michael K Rosen, Ronald D Vale. Science 2016
554
17

Germline P granules are liquid droplets that localize by controlled dissolution/condensation.
Clifford P Brangwynne, Christian R Eckmann, David S Courson, Agata Rybarska, Carsten Hoege, Jöbin Gharakhani, Frank Jülicher, Anthony A Hyman. Science 2009
17

Compositional Control of Phase-Separated Cellular Bodies.
Salman F Banani, Allyson M Rice, William B Peeples, Yuan Lin, Saumya Jain, Roy Parker, Michael K Rosen. Cell 2016
553
17

Phase Separation-Mediated TARP/MAGUK Complex Condensation and AMPA Receptor Synaptic Transmission.
Menglong Zeng, Javier Díaz-Alonso, Fei Ye, Xudong Chen, Jia Xu, Zeyang Ji, Roger A Nicoll, Mingjie Zhang. Neuron 2019
63
17

Protein Phase Separation: A New Phase in Cell Biology.
Steven Boeynaems, Simon Alberti, Nicolas L Fawzi, Tanja Mittag, Magdalini Polymenidou, Frederic Rousseau, Joost Schymkowitz, James Shorter, Benjamin Wolozin, Ludo Van Den Bosch,[...]. Trends Cell Biol 2018
867
17

Assembly of synaptic active zones requires phase separation of scaffold molecules.
Nathan A McDonald, Richard D Fetter, Kang Shen. Nature 2020
39
17

Transcellular Nanoalignment of Synaptic Function.
Thomas Biederer, Pascal S Kaeser, Thomas A Blanpied. Neuron 2017
173
14

Relative and absolute quantification of postsynaptic density proteome isolated from rat forebrain and cerebellum.
Dongmei Cheng, Casper C Hoogenraad, John Rush, Elizabeth Ramm, Max A Schlager, Duc M Duong, Ping Xu, Sameera R Wijayawardana, John Hanfelt, Terunaga Nakagawa,[...]. Mol Cell Proteomics 2006
348
14

Regulation of Transmembrane Signaling by Phase Separation.
Lindsay B Case, Jonathon A Ditlev, Michael K Rosen. Annu Rev Biophys 2019
114
14

Phase Separation of FUS Is Suppressed by Its Nuclear Import Receptor and Arginine Methylation.
Mario Hofweber, Saskia Hutten, Benjamin Bourgeois, Emil Spreitzer, Annika Niedner-Boblenz, Martina Schifferer, Marc-David Ruepp, Mikael Simons, Dierk Niessing, Tobias Madl,[...]. Cell 2018
320
14

Coexisting Liquid Phases Underlie Nucleolar Subcompartments.
Marina Feric, Nilesh Vaidya, Tyler S Harmon, Diana M Mitrea, Lian Zhu, Tiffany M Richardson, Richard W Kriwacki, Rohit V Pappu, Clifford P Brangwynne. Cell 2016
860
14

Liquid-liquid phase separation in biology.
Anthony A Hyman, Christoph A Weber, Frank Jülicher. Annu Rev Cell Dev Biol 2014
14

Nanodomain coupling between Ca²⁺ channels and sensors of exocytosis at fast mammalian synapses.
Emmanuel Eggermann, Iancu Bucurenciu, Sarit Pati Goswami, Peter Jonas. Nat Rev Neurosci 2011
324
14

Homer1a drives homeostatic scaling-down of excitatory synapses during sleep.
Graham H Diering, Raja S Nirujogi, Richard H Roth, Paul F Worley, Akhilesh Pandey, Richard L Huganir. Science 2017
258
14

Liquid-Liquid Phase Separation in Neuronal Development and Synaptic Signaling.
Xiandeng Wu, Qixu Cai, Zhe Feng, Mingjie Zhang. Dev Cell 2020
38
14

Synaptic Vesicle Clusters at Synapses: A Distinct Liquid Phase?
Dragomir Milovanovic, Pietro De Camilli. Neuron 2017
52
11

The presynaptic active zone.
Thomas C Südhof. Neuron 2012
610
11


The disordered P granule protein LAF-1 drives phase separation into droplets with tunable viscosity and dynamics.
Shana Elbaum-Garfinkle, Younghoon Kim, Krzysztof Szczepaniak, Carlos Chih-Hsiung Chen, Christian R Eckmann, Sua Myong, Clifford P Brangwynne. Proc Natl Acad Sci U S A 2015
616
11

Phase separation drives heterochromatin domain formation.
Amy R Strom, Alexander V Emelyanov, Mustafa Mir, Dmitry V Fyodorov, Xavier Darzacq, Gary H Karpen. Nature 2017
896
11

ALS/FTD Mutation-Induced Phase Transition of FUS Liquid Droplets and Reversible Hydrogels into Irreversible Hydrogels Impairs RNP Granule Function.
Tetsuro Murakami, Seema Qamar, Julie Qiaojin Lin, Gabriele S Kaminski Schierle, Eric Rees, Akinori Miyashita, Ana R Costa, Roger B Dodd, Fiona T S Chan, Claire H Michel,[...]. Neuron 2015
495
11

Nuclear-Import Receptors Reverse Aberrant Phase Transitions of RNA-Binding Proteins with Prion-like Domains.
Lin Guo, Hong Joo Kim, Hejia Wang, John Monaghan, Fernande Freyermuth, Julie C Sung, Kevin O'Donovan, Charlotte M Fare, Zamia Diaz, Nikita Singh,[...]. Cell 2018
252
11

Phosphoregulated FMRP phase separation models activity-dependent translation through bidirectional control of mRNA granule formation.
Brian Tsang, Jason Arsenault, Robert M Vernon, Hong Lin, Nahum Sonenberg, Lu-Yang Wang, Alaji Bah, Julie D Forman-Kay. Proc Natl Acad Sci U S A 2019
148
11

Phase transition of a disordered nuage protein generates environmentally responsive membraneless organelles.
Timothy J Nott, Evangelia Petsalaki, Patrick Farber, Dylan Jervis, Eden Fussner, Anne Plochowietz, Timothy D Craggs, David P Bazett-Jones, Tony Pawson, Julie D Forman-Kay,[...]. Mol Cell 2015
904
11

A Liquid-to-Solid Phase Transition of the ALS Protein FUS Accelerated by Disease Mutation.
Avinash Patel, Hyun O Lee, Louise Jawerth, Shovamayee Maharana, Marcus Jahnel, Marco Y Hein, Stoyno Stoynov, Julia Mahamid, Shambaditya Saha, Titus M Franzmann,[...]. Cell 2015
11

The Centrosome Is a Selective Condensate that Nucleates Microtubules by Concentrating Tubulin.
Jeffrey B Woodruff, Beatriz Ferreira Gomes, Per O Widlund, Julia Mahamid, Alf Honigmann, Anthony A Hyman. Cell 2017
317
11

IUPred2A: context-dependent prediction of protein disorder as a function of redox state and protein binding.
Bálint Mészáros, Gábor Erdos, Zsuzsanna Dosztányi. Nucleic Acids Res 2018
601
11

Synaptic nanomodules underlie the organization and plasticity of spine synapses.
Martin Hruska, Nathan Henderson, Sylvain J Le Marchand, Haani Jafri, Matthew B Dalva. Nat Neurosci 2018
125
11

Liquid-liquid phase separation in biology: mechanisms, physiological functions and human diseases.
Hong Zhang, Xiong Ji, Pilong Li, Cong Liu, Jizhong Lou, Zheng Wang, Wenyu Wen, Yue Xiao, Mingjie Zhang, Xueliang Zhu. Sci China Life Sci 2020
70
11

Mechanisms of CaMKII action in long-term potentiation.
John Lisman, Ryohei Yasuda, Sridhar Raghavachari. Nat Rev Neurosci 2012
679
11

The postsynaptic architecture of excitatory synapses: a more quantitative view.
Morgan Sheng, Casper C Hoogenraad. Annu Rev Biochem 2007
667
11

Structural and molecular remodeling of dendritic spine substructures during long-term potentiation.
Miquel Bosch, Jorge Castro, Takeo Saneyoshi, Hitomi Matsuno, Mriganka Sur, Yasunori Hayashi. Neuron 2014
361
11

Vesicle Tethering on the Surface of Phase-Separated Active Zone Condensates.
Xiandeng Wu, Marcelo Ganzella, Jinchuan Zhou, Shihan Zhu, Reinhard Jahn, Mingjie Zhang. Mol Cell 2021
34
11

CaMKII activation persistently segregates postsynaptic proteins via liquid phase separation.
Tomohisa Hosokawa, Pin-Wu Liu, Qixu Cai, Joana S Ferreira, Florian Levet, Corey Butler, Jean-Baptiste Sibarita, Daniel Choquet, Laurent Groc, Eric Hosy,[...]. Nat Neurosci 2021
27
14


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.