A citation-based method for searching scientific literature

Edoardo Galli, Ekaterina Friebel, Florian Ingelfinger, Susanne Unger, Nicolás Gonzalo Núñez, Burkhard Becher. Eur J Immunol 2019
Times Cited: 23







List of co-cited articles
194 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum.
Sean C Bendall, Erin F Simonds, Peng Qiu, El-ad D Amir, Peter O Krutzik, Rachel Finck, Robert V Bruggner, Rachel Melamed, Angelica Trejo, Olga I Ornatsky,[...]. Science 2011
26

Mass cytometry: technique for real time single cell multitarget immunoassay based on inductively coupled plasma time-of-flight mass spectrometry.
Dmitry R Bandura, Vladimir I Baranov, Olga I Ornatsky, Alexei Antonov, Robert Kinach, Xudong Lou, Serguei Pavlov, Sergey Vorobiev, John E Dick, Scott D Tanner. Anal Chem 2009
722
26

Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE.
Peng Qiu, Erin F Simonds, Sean C Bendall, Kenneth D Gibbs, Robert V Bruggner, Michael D Linderman, Karen Sachs, Garry P Nolan, Sylvia K Plevritis. Nat Biotechnol 2011
627
21

Variation in the human immune system is largely driven by non-heritable influences.
Petter Brodin, Vladimir Jojic, Tianxiang Gao, Sanchita Bhattacharya, Cesar J Lopez Angel, David Furman, Shai Shen-Orr, Cornelia L Dekker, Gary E Swan, Atul J Butte,[...]. Cell 2015
573
21

Mass Cytometry: Single Cells, Many Features.
Matthew H Spitzer, Garry P Nolan. Cell 2016
588
21

GM-CSF and CXCR4 define a T helper cell signature in multiple sclerosis.
Edoardo Galli, Felix J Hartmann, Bettina Schreiner, Florian Ingelfinger, Eirini Arvaniti, Martin Diebold, Dunja Mrdjen, Franziska van der Meer, Carsten Krieg, Faiez Al Nimer,[...]. Nat Med 2019
91
21

A deep profiler's guide to cytometry.
Sean C Bendall, Garry P Nolan, Mario Roederer, Pratip K Chattopadhyay. Trends Immunol 2012
427
17

FlowSOM: Using self-organizing maps for visualization and interpretation of cytometry data.
Sofie Van Gassen, Britt Callebaut, Mary J Van Helden, Bart N Lambrecht, Piet Demeester, Tom Dhaene, Yvan Saeys. Cytometry A 2015
631
17

Single-cell technologies for monitoring immune systems.
Pratip K Chattopadhyay, Todd M Gierahn, Mario Roederer, J Christopher Love. Nat Immunol 2014
243
17


Highly multiplexed imaging of tumor tissues with subcellular resolution by mass cytometry.
Charlotte Giesen, Hao A O Wang, Denis Schapiro, Nevena Zivanovic, Andrea Jacobs, Bodo Hattendorf, Peter J Schüffler, Daniel Grolimund, Joachim M Buhmann, Simone Brandt,[...]. Nat Methods 2014
808
17

Integrative single-cell analysis.
Tim Stuart, Rahul Satija. Nat Rev Genet 2019
455
17

Producing GM-CSF: a unique T helper subset?
Dietmar Herndler-Brandstetter, Richard A Flavell. Cell Res 2014
21
14

Ocrelizumab versus Interferon Beta-1a in Relapsing Multiple Sclerosis.
Stephen L Hauser, Amit Bar-Or, Giancarlo Comi, Gavin Giovannoni, Hans-Peter Hartung, Bernhard Hemmer, Fred Lublin, Xavier Montalban, Kottil W Rammohan, Krzysztof Selmaj,[...]. N Engl J Med 2017
812
13

Highly multiparametric analysis by mass cytometry.
Olga Ornatsky, Dmitry Bandura, Vladimir Baranov, Mark Nitz, Mitchell A Winnik, Scott Tanner. J Immunol Methods 2010
238
13

The Cytokine GM-CSF Drives the Inflammatory Signature of CCR2+ Monocytes and Licenses Autoimmunity.
Andrew L Croxford, Margit Lanzinger, Felix J Hartmann, Bettina Schreiner, Florian Mair, Pawel Pelczar, Björn E Clausen, Steffen Jung, Melanie Greter, Burkhard Becher. Immunity 2015
284
13

Chemokines in multiple sclerosis: CXCL12 and CXCL13 up-regulation is differentially linked to CNS immune cell recruitment.
Markus Krumbholz, Diethilde Theil, Sabine Cepok, Bernhard Hemmer, Pia Kivisäkk, Richard M Ransohoff, Monika Hofbauer, Cinthia Farina, Tobias Derfuss, Caroline Hartle,[...]. Brain 2006
375
13

STAT5 programs a distinct subset of GM-CSF-producing T helper cells that is essential for autoimmune neuroinflammation.
Wanqiang Sheng, Fan Yang, Yi Zhou, Henry Yang, Pey Yng Low, David Michael Kemeny, Patrick Tan, Akira Moh, Mark H Kaplan, Yongliang Zhang,[...]. Cell Res 2014
124
13

Fate-Mapping of GM-CSF Expression Identifies a Discrete Subset of Inflammation-Driving T Helper Cells Regulated by Cytokines IL-23 and IL-1β.
Juliana Komuczki, Selma Tuzlak, Ekaterina Friebel, Tom Hartwig, Sabine Spath, Philip Rosenstiel, Ari Waisman, Lennart Opitz, Mohammed Oukka, Bettina Schreiner,[...]. Immunity 2019
90
13



The end of gating? An introduction to automated analysis of high dimensional cytometry data.
Florian Mair, Felix J Hartmann, Dunja Mrdjen, Vinko Tosevski, Carsten Krieg, Burkhard Becher. Eur J Immunol 2016
135
13


Stereotypic Immune System Development in Newborn Children.
Axel Olin, Ewa Henckel, Yang Chen, Tadepally Lakshmikanth, Christian Pou, Jaromir Mikes, Anna Gustafsson, Anna Karin Bernhardsson, Cheng Zhang, Kajsa Bohlin,[...]. Cell 2018
273
13

The compartmentalized inflammatory response in the multiple sclerosis brain is composed of tissue-resident CD8+ T lymphocytes and B cells.
Joana Machado-Santos, Etsuji Saji, Anna R Tröscher, Manuela Paunovic, Roland Liblau, Galina Gabriely, Christian G Bien, Jan Bauer, Hans Lassmann. Brain 2018
212
13

viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia.
El-ad David Amir, Kara L Davis, Michelle D Tadmor, Erin F Simonds, Jacob H Levine, Sean C Bendall, Daniel K Shenfeld, Smita Krishnaswamy, Garry P Nolan, Dana Pe'er. Nat Biotechnol 2013
13

High-throughput quantitation of inorganic nanoparticle biodistribution at the single-cell level using mass cytometry.
Yu-Sang Sabrina Yang, Prabhani U Atukorale, Kelly D Moynihan, Ahmet Bekdemir, Kavya Rakhra, Li Tang, Francesco Stellacci, Darrell J Irvine. Nat Commun 2017
60
13

Dimensionality reduction for visualizing single-cell data using UMAP.
Etienne Becht, Leland McInnes, John Healy, Charles-Antoine Dutertre, Immanuel W H Kwok, Lai Guan Ng, Florent Ginhoux, Evan W Newell. Nat Biotechnol 2018
13

Integrating single-cell transcriptomic data across different conditions, technologies, and species.
Andrew Butler, Paul Hoffman, Peter Smibert, Efthymia Papalexi, Rahul Satija. Nat Biotechnol 2018
13

Interleukin-23 rather than interleukin-12 is the critical cytokine for autoimmune inflammation of the brain.
Daniel J Cua, Jonathan Sherlock, Yi Chen, Craig A Murphy, Barbara Joyce, Brian Seymour, Linda Lucian, Wayne To, Sylvia Kwan, Tatyana Churakova,[...]. Nature 2003
13

Global analyses of human immune variation reveal baseline predictors of postvaccination responses.
John S Tsang, Pamela L Schwartzberg, Yuri Kotliarov, Angelique Biancotto, Zhi Xie, Ronald N Germain, Ena Wang, Matthew J Olnes, Manikandan Narayanan, Hana Golding,[...]. Cell 2014
276
13

Lineage structure of the human antibody repertoire in response to influenza vaccination.
Ning Jiang, Jiankui He, Joshua A Weinstein, Lolita Penland, Sanae Sasaki, Xiao-Song He, Cornelia L Dekker, Nai-Ying Zheng, Min Huang, Meghan Sullivan,[...]. Sci Transl Med 2013
235
13

High-dimensional single-cell analysis predicts response to anti-PD-1 immunotherapy.
Carsten Krieg, Malgorzata Nowicka, Silvia Guglietta, Sabrina Schindler, Felix J Hartmann, Lukas M Weber, Reinhard Dummer, Mark D Robinson, Mitchell P Levesque, Burkhard Becher. Nat Med 2018
369
13

A clinically meaningful metric of immune age derived from high-dimensional longitudinal monitoring.
Ayelet Alpert, Yishai Pickman, Michael Leipold, Yael Rosenberg-Hasson, Xuhuai Ji, Renaud Gaujoux, Hadas Rabani, Elina Starosvetsky, Ksenya Kveler, Steven Schaffert,[...]. Nat Med 2019
156
13

Induction of ICOS+CXCR3+CXCR5+ TH cells correlates with antibody responses to influenza vaccination.
Salah-Eddine Bentebibel, Santiago Lopez, Gerlinde Obermoser, Nathalie Schmitt, Cynthia Mueller, Carson Harrod, Emilio Flano, Asuncion Mejias, Randy A Albrecht, Derek Blankenship,[...]. Sci Transl Med 2013
426
13

Simultaneous epitope and transcriptome measurement in single cells.
Marlon Stoeckius, Christoph Hafemeister, William Stephenson, Brian Houck-Loomis, Pratip K Chattopadhyay, Harold Swerdlow, Rahul Satija, Peter Smibert. Nat Methods 2017
965
13

Meeting the Challenges of High-Dimensional Single-Cell Data Analysis in Immunology.
Subarna Palit, Christoph Heuser, Gustavo P de Almeida, Fabian J Theis, Christina E Zielinski. Front Immunol 2019
39
13

Normalization of mass cytometry data with bead standards.
Rachel Finck, Erin F Simonds, Astraea Jager, Smita Krishnaswamy, Karen Sachs, Wendy Fantl, Dana Pe'er, Garry P Nolan, Sean C Bendall. Cytometry A 2013
406
8

Dysregulation of the Cytokine GM-CSF Induces Spontaneous Phagocyte Invasion and Immunopathology in the Central Nervous System.
Sabine Spath, Juliana Komuczki, Mario Hermann, Pawel Pelczar, Florian Mair, Bettina Schreiner, Burkhard Becher. Immunity 2017
92
8

Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis.
Jacob H Levine, Erin F Simonds, Sean C Bendall, Kara L Davis, El-ad D Amir, Michelle D Tadmor, Oren Litvin, Harris G Fienberg, Astraea Jager, Eli R Zunder,[...]. Cell 2015
862
8

Multiple sclerosis-associated IL2RA polymorphism controls GM-CSF production in human TH cells.
Felix J Hartmann, Mohsen Khademi, Jehan Aram, Sandra Ammann, Ingrid Kockum, Cris Constantinescu, Bruno Gran, Fredrik Piehl, Tomas Olsson, Laura Codarri,[...]. Nat Commun 2014
109
8

High-dimensional single-cell analysis reveals the immune signature of narcolepsy.
Felix J Hartmann, Raphaël Bernard-Valnet, Clémence Quériault, Dunja Mrdjen, Lukas M Weber, Edoardo Galli, Carsten Krieg, Mark D Robinson, Xuan-Hung Nguyen, Yves Dauvilliers,[...]. J Exp Med 2016
61
8

RORγt drives production of the cytokine GM-CSF in helper T cells, which is essential for the effector phase of autoimmune neuroinflammation.
Laura Codarri, Gabor Gyülvészi, Vinko Tosevski, Lysann Hesske, Adriano Fontana, Laurent Magnenat, Tobias Suter, Burkhard Becher. Nat Immunol 2011
849
8

Barcoding of live human peripheral blood mononuclear cells for multiplexed mass cytometry.
Henrik E Mei, Michael D Leipold, Axel Ronald Schulz, Cariad Chester, Holden T Maecker. J Immunol 2015
104
8

Palladium-based mass tag cell barcoding with a doublet-filtering scheme and single-cell deconvolution algorithm.
Eli R Zunder, Rachel Finck, Gregory K Behbehani, El-Ad D Amir, Smita Krishnaswamy, Veronica D Gonzalez, Cynthia G Lorang, Zach Bjornson, Matthew H Spitzer, Bernd Bodenmiller,[...]. Nat Protoc 2015
294
8

IMMUNOLOGY. An interactive reference framework for modeling a dynamic immune system.
Matthew H Spitzer, Pier Federico Gherardini, Gabriela K Fragiadakis, Nupur Bhattacharya, Robert T Yuan, Andrew N Hotson, Rachel Finck, Yaron Carmi, Eli R Zunder, Wendy J Fantl,[...]. Science 2015
146
8

IL-17 and GM-CSF expression are antagonistically regulated by human T helper cells.
Rebecca Noster, René Riedel, Mir-Farzin Mashreghi, Helena Radbruch, Lutz Harms, Claudia Haftmann, Hyun-Dong Chang, Andreas Radbruch, Christina E Zielinski. Sci Transl Med 2014
172
8


Elevated expression of granulocyte-macrophage colony-stimulating factor receptor in multiple sclerosis lesions.
Jaime Imitola, Javad Rasouli, Fumihiro Watanabe, Kader Mahajan, Aswhini D Sharan, Bogoljub Ciric, Guang-Xian Zhang, Abdolmohamad Rostami. J Neuroimmunol 2018
24
8

Placebo-controlled phase 3 study of oral BG-12 or glatiramer in multiple sclerosis.
Robert J Fox, David H Miller, J Theodore Phillips, Michael Hutchinson, Eva Havrdova, Mariko Kita, Minhua Yang, Kartik Raghupathi, Mark Novas, Marianne T Sweetser,[...]. N Engl J Med 2012
907
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.