A citation-based method for searching scientific literature


List of co-cited articles
673 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Quality and quantity control of gene expression by nonsense-mediated mRNA decay.
Tatsuaki Kurosaki, Maximilian W Popp, Lynne E Maquat. Nat Rev Mol Cell Biol 2019
170
36

Binding of a novel SMG-1-Upf1-eRF1-eRF3 complex (SURF) to the exon junction complex triggers Upf1 phosphorylation and nonsense-mediated mRNA decay.
Isao Kashima, Akio Yamashita, Natsuko Izumi, Naoyuki Kataoka, Ryo Morishita, Shinichi Hoshino, Mutsuhito Ohno, Gideon Dreyfuss, Shigeo Ohno. Genes Dev 2006
392
29

Upf1 senses 3'UTR length to potentiate mRNA decay.
J Robert Hogg, Stephen P Goff. Cell 2010
209
27

Nonsense-mediated mRNA decay: an intricate machinery that shapes transcriptomes.
Søren Lykke-Andersen, Torben Heick Jensen. Nat Rev Mol Cell Biol 2015
362
24

Transcriptome-wide identification of NMD-targeted human mRNAs reveals extensive redundancy between SMG6- and SMG7-mediated degradation pathways.
Martino Colombo, Evangelos D Karousis, Joël Bourquin, Rémy Bruggmann, Oliver Mühlemann. RNA 2017
66
22

Nonsense surveillance regulates expression of diverse classes of mammalian transcripts and mutes genomic noise.
Joshua T Mendell, Neda A Sharifi, Jennifer L Meyers, Francisco Martinez-Murillo, Harry C Dietz. Nat Genet 2004
585
21

Global analyses of UPF1 binding and function reveal expanded scope of nonsense-mediated mRNA decay.
Jessica A Hurt, Alex D Robertson, Christopher B Burge. Genome Res 2013
145
21

Translation-dependent displacement of UPF1 from coding sequences causes its enrichment in 3' UTRs.
David Zünd, Andreas R Gruber, Mihaela Zavolan, Oliver Mühlemann. Nat Struct Mol Biol 2013
100
21

SMG6 promotes endonucleolytic cleavage of nonsense mRNA in human cells.
Andrea B Eberle, Søren Lykke-Andersen, Oliver Mühlemann, Torben Heick Jensen. Nat Struct Mol Biol 2009
258
19

A post-translational regulatory switch on UPF1 controls targeted mRNA degradation.
Tatsuaki Kurosaki, Wencheng Li, Mainul Hoque, Maximilian W-L Popp, Dmitri N Ermolenko, Bin Tian, Lynne E Maquat. Genes Dev 2014
95
19

A faux 3'-UTR promotes aberrant termination and triggers nonsense-mediated mRNA decay.
Nadia Amrani, Robin Ganesan, Stephanie Kervestin, David A Mangus, Shubhendu Ghosh, Allan Jacobson. Nature 2004
347
19

Nonsense-Mediated mRNA Decay Begins Where Translation Ends.
Evangelos D Karousis, Oliver Mühlemann. Cold Spring Harb Perspect Biol 2019
61
18

Hyperphosphorylation amplifies UPF1 activity to resolve stalls in nonsense-mediated mRNA decay.
Sébastien Durand, Tobias M Franks, Jens Lykke-Andersen. Nat Commun 2016
36
30

Target Discrimination in Nonsense-Mediated mRNA Decay Requires Upf1 ATPase Activity.
Suzanne R Lee, Gabriel A Pratt, Fernando J Martinez, Gene W Yeo, Jens Lykke-Andersen. Mol Cell 2015
58
18

Nonsense-mediated mRNA decay: The challenge of telling right from wrong in a complex transcriptome.
Aparna Kishor, Sarah E Fritz, J Robert Hogg. Wiley Interdiscip Rev RNA 2019
33
33

Nonsense-mediated mRNA decay: novel mechanistic insights and biological impact.
Evangelos D Karousis, Sofia Nasif, Oliver Mühlemann. Wiley Interdiscip Rev RNA 2016
103
16

Upf1 phosphorylation triggers translational repression during nonsense-mediated mRNA decay.
Olaf Isken, Yoon Ki Kim, Nao Hosoda, Greg L Mayeur, John W B Hershey, Lynne E Maquat. Cell 2008
206
16

Molecular mechanisms for the RNA-dependent ATPase activity of Upf1 and its regulation by Upf2.
Sutapa Chakrabarti, Uma Jayachandran, Fabien Bonneau, Francesca Fiorini, Claire Basquin, Silvia Domcke, Hervé Le Hir, Elena Conti. Mol Cell 2011
155
16




Autoregulation of the nonsense-mediated mRNA decay pathway in human cells.
Hasmik Yepiskoposyan, Florian Aeschimann, Daniel Nilsson, Michal Okoniewski, Oliver Mühlemann. RNA 2011
155
14

Phosphorylation of hUPF1 induces formation of mRNA surveillance complexes containing hSMG-5 and hSMG-7.
Tetsuo Ohnishi, Akio Yamashita, Isao Kashima, Thomas Schell, Kirk R Anders, Andrew Grimson, Takahisa Hachiya, Matthias W Hentze, Philip Anderson, Shigeo Ohno. Mol Cell 2003
232
14

NMD factors UPF2 and UPF3 bridge UPF1 to the exon junction complex and stimulate its RNA helicase activity.
Hala Chamieh, Lionel Ballut, Fabien Bonneau, Hervé Le Hir. Nat Struct Mol Biol 2008
196
14


Human Upf1 is a highly processive RNA helicase and translocase with RNP remodelling activities.
Francesca Fiorini, Debjani Bagchi, Hervé Le Hir, Vincent Croquette. Nat Commun 2015
66
14

Posttranscriptional gene regulation by spatial rearrangement of the 3' untranslated region.
Andrea B Eberle, Lukas Stalder, Hansruedi Mathys, Rodolfo Zamudio Orozco, Oliver Mühlemann. PLoS Biol 2008
204
14

EJC-independent degradation of nonsense immunoglobulin-mu mRNA depends on 3' UTR length.
Marc Bühler, Silvia Steiner, Fabio Mohn, Alexandra Paillusson, Oliver Mühlemann. Nat Struct Mol Biol 2006
175
14

eIF4E-bound mRNPs are substrates for nonsense-mediated mRNA decay in mammalian cells.
Simone C Rufener, Oliver Mühlemann. Nat Struct Mol Biol 2013
64
14

Mechanism and regulation of the nonsense-mediated decay pathway.
Nele Hug, Dasa Longman, Javier F Cáceres. Nucleic Acids Res 2016
230
13

SMG6 is the catalytic endonuclease that cleaves mRNAs containing nonsense codons in metazoan.
Eric Huntzinger, Isao Kashima, Maria Fauser, Jérôme Saulière, Elisa Izaurralde. RNA 2008
207
13


Rent1, a trans-effector of nonsense-mediated mRNA decay, is essential for mammalian embryonic viability.
S M Medghalchi, P A Frischmeyer, J T Mendell, A G Kelly, A M Lawler, H C Dietz. Hum Mol Genet 2001
200
13

Identification of hundreds of novel UPF1 target transcripts by direct determination of whole transcriptome stability.
Hidenori Tani, Naoto Imamachi, Kazi Abdus Salam, Rena Mizutani, Kenichi Ijiri, Takuma Irie, Tetsushi Yada, Yutaka Suzuki, Nobuyoshi Akimitsu. RNA Biol 2012
98
13


Dual function of UPF3B in early and late translation termination.
Gabriele Neu-Yilik, Etienne Raimondeau, Boris Eliseev, Lahari Yeramala, Beate Amthor, Aurélien Deniaud, Karine Huard, Kathrin Kerschgens, Matthias W Hentze, Christiane Schaffitzel,[...]. EMBO J 2017
43
18

Nonsense-mediated mRNA decay effectors are essential for zebrafish embryonic development and survival.
Nadine Wittkopp, Eric Huntzinger, Catrin Weiler, Jérôme Saulière, Steffen Schmidt, Mahendra Sonawane, Elisa Izaurralde. Mol Cell Biol 2009
124
13


Glucocorticoid receptor interacts with PNRC2 in a ligand-dependent manner to recruit UPF1 for rapid mRNA degradation.
Hana Cho, Ok Hyun Park, Joori Park, Incheol Ryu, Jeonghan Kim, Jesang Ko, Yoon Ki Kim. Proc Natl Acad Sci U S A 2015
31
22

The pioneer round of translation: features and functions.
Lynne E Maquat, Woan-Yuh Tarn, Olaf Isken. Cell 2010
148
11

Mammalian Staufen1 recruits Upf1 to specific mRNA 3'UTRs so as to elicit mRNA decay.
Yoon Ki Kim, Luc Furic, Luc Desgroseillers, Lynne E Maquat. Cell 2005
360
11

Identification and molecular characterization of cellular factors required for glucocorticoid receptor-mediated mRNA decay.
Ok Hyun Park, Joori Park, Mira Yu, Hyoung-Tae An, Jesang Ko, Yoon Ki Kim. Genes Dev 2016
23
30

The UPF1 interactome reveals interaction networks between RNA degradation and translation repression factors in Arabidopsis.
Clara Chicois, Hélène Scheer, Shahïnez Garcia, Hélène Zuber, Jérôme Mutterer, Johana Chicher, Philippe Hammann, Dominique Gagliardi, Damien Garcia. Plant J 2018
21
33

Nonsense-mediated decay serves as a general viral restriction mechanism in plants.
Damien Garcia, Shahinez Garcia, Olivier Voinnet. Cell Host Microbe 2014
77
11

RNA homeostasis governed by cell type-specific and branched feedback loops acting on NMD.
Lulu Huang, Chih-Hong Lou, Waikin Chan, Eleen Y Shum, Ada Shao, Erica Stone, Rachid Karam, Hye-Won Song, Miles F Wilkinson. Mol Cell 2011
127
11


Degradation of Gadd45 mRNA by nonsense-mediated decay is essential for viability.
Jonathan O Nelson, Kristin A Moore, Alex Chapin, Julie Hollien, Mark M Metzstein. Elife 2016
34
20

Beyond quality control: The role of nonsense-mediated mRNA decay (NMD) in regulating gene expression.
Sofia Nasif, Lara Contu, Oliver Mühlemann. Semin Cell Dev Biol 2018
61
11

The host nonsense-mediated mRNA decay pathway restricts Mammalian RNA virus replication.
Giuseppe Balistreri, Peter Horvath, Christoph Schweingruber, David Zünd, Gerald McInerney, Andres Merits, Oliver Mühlemann, Claus Azzalin, Ari Helenius. Cell Host Microbe 2014
97
11

SMG7 acts as a molecular link between mRNA surveillance and mRNA decay.
Leonie Unterholzner, Elisa Izaurralde. Mol Cell 2004
209
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.