A citation-based method for searching scientific literature

Katarína Tiklová, Åsa K Björklund, Laura Lahti, Alessandro Fiorenzano, Sara Nolbrant, Linda Gillberg, Nikolaos Volakakis, Chika Yokota, Markus M Hilscher, Thomas Hauling, Fredrik Holmström, Eliza Joodmardi, Mats Nilsson, Malin Parmar, Thomas Perlmann. Nat Commun 2019
Times Cited: 76







List of co-cited articles
898 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Molecular Diversity of Midbrain Development in Mouse, Human, and Stem Cells.
Gioele La Manno, Daniel Gyllborg, Simone Codeluppi, Kaneyasu Nishimura, Carmen Salto, Amit Zeisel, Lars E Borm, Simon R W Stott, Enrique M Toledo, J Carlos Villaescusa,[...]. Cell 2016
349
44

Defining midbrain dopaminergic neuron diversity by single-cell gene expression profiling.
Jean-Francois Poulin, Jian Zou, Janelle Drouin-Ouellet, Kwang-Youn A Kim, Francesca Cicchetti, Rajeshwar B Awatramani. Cell Rep 2014
153
28

Molecular Diversity and Specializations among the Cells of the Adult Mouse Brain.
Arpiar Saunders, Evan Z Macosko, Alec Wysoker, Melissa Goldman, Fenna M Krienen, Heather de Rivera, Elizabeth Bien, Matthew Baum, Laura Bortolin, Shuyu Wang,[...]. Cell 2018
504
26

Single-Cell RNA-Seq of Mouse Dopaminergic Neurons Informs Candidate Gene Selection for Sporadic Parkinson Disease.
Paul W Hook, Sarah A McClymont, Gabrielle H Cannon, William D Law, A Jennifer Morton, Loyal A Goff, Andrew S McCallion. Am J Hum Genet 2018
46
39

Classification of Midbrain Dopamine Neurons Using Single-Cell Gene Expression Profiling Approaches.
Jean-Francois Poulin, Zachary Gaertner, Oscar Andrés Moreno-Ramos, Rajeshwar Awatramani. Trends Neurosci 2020
45
40

Mapping projections of molecularly defined dopamine neuron subtypes using intersectional genetic approaches.
Jean-Francois Poulin, Giuliana Caronia, Caitlyn Hofer, Qiaoling Cui, Brandon Helm, Charu Ramakrishnan, C Savio Chan, Daniel A Dombeck, Karl Deisseroth, Rajeshwar Awatramani. Nat Neurosci 2018
124
19

Dopamine neuron systems in the brain: an update.
Anders Björklund, Stephen B Dunnett. Trends Neurosci 2007
977
19

Dopamine neurons derived from human ES cells efficiently engraft in animal models of Parkinson's disease.
Sonja Kriks, Jae-Won Shim, Jinghua Piao, Yosif M Ganat, Dustin R Wakeman, Zhong Xie, Luis Carrillo-Reid, Gordon Auyeung, Chris Antonacci, Amanda Buch,[...]. Nature 2011
19

Sox6 and Otx2 control the specification of substantia nigra and ventral tegmental area dopamine neurons.
Lia Panman, Maria Papathanou, Ariadna Laguna, Tony Oosterveen, Nikolaos Volakakis, Dario Acampora, Idha Kurtsdotter, Takashi Yoshitake, Jan Kehr, Eliza Joodmardi,[...]. Cell Rep 2014
83
18

Molecular Architecture of the Mouse Nervous System.
Amit Zeisel, Hannah Hochgerner, Peter Lönnerberg, Anna Johnsson, Fatima Memic, Job van der Zwan, Martin Häring, Emelie Braun, Lars E Borm, Gioele La Manno,[...]. Cell 2018
841
17

Integrating single-cell transcriptomic data across different conditions, technologies, and species.
Andrew Butler, Paul Hoffman, Peter Smibert, Efthymia Papalexi, Rahul Satija. Nat Biotechnol 2018
17

Single-Cell Analysis Reveals a Close Relationship between Differentiating Dopamine and Subthalamic Nucleus Neuronal Lineages.
Nigel Kee, Nikolaos Volakakis, Agnete Kirkeby, Lina Dahl, Helena Storvall, Sara Nolbrant, Laura Lahti, Åsa K Björklund, Linda Gillberg, Eliza Joodmardi,[...]. Cell Stem Cell 2017
75
17

How to make a midbrain dopaminergic neuron.
Ernest Arenas, Mark Denham, J Carlos Villaescusa. Development 2015
164
15


Comprehensive Integration of Single-Cell Data.
Tim Stuart, Andrew Butler, Paul Hoffman, Christoph Hafemeister, Efthymia Papalexi, William M Mauck, Yuhan Hao, Marlon Stoeckius, Peter Smibert, Rahul Satija. Cell 2019
15

Brain structure. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq.
Amit Zeisel, Ana B Muñoz-Manchado, Simone Codeluppi, Peter Lönnerberg, Gioele La Manno, Anna Juréus, Sueli Marques, Hermany Munguba, Liqun He, Christer Betsholtz,[...]. Science 2015
14

Visualization and analysis of gene expression in tissue sections by spatial transcriptomics.
Patrik L Ståhl, Fredrik Salmén, Sanja Vickovic, Anna Lundmark, José Fernández Navarro, Jens Magnusson, Stefania Giacomello, Michaela Asp, Jakub O Westholm, Mikael Huss,[...]. Science 2016
722
13

Adult mouse cortical cell taxonomy revealed by single cell transcriptomics.
Bosiljka Tasic, Vilas Menon, Thuc Nghi Nguyen, Tae Kyung Kim, Tim Jarsky, Zizhen Yao, Boaz Levi, Lucas T Gray, Staci A Sorensen, Tim Dolbeare,[...]. Nat Neurosci 2016
781
13

Predictive Markers Guide Differentiation to Improve Graft Outcome in Clinical Translation of hESC-Based Therapy for Parkinson's Disease.
Agnete Kirkeby, Sara Nolbrant, Katarina Tiklova, Andreas Heuer, Nigel Kee, Tiago Cardoso, Daniella Rylander Ottosson, Mariah J Lelos, Pedro Rifes, Stephen B Dunnett,[...]. Cell Stem Cell 2017
121
13

Generation of regionally specified neural progenitors and functional neurons from human embryonic stem cells under defined conditions.
Agnete Kirkeby, Shane Grealish, Daniel A Wolf, Jenny Nelander, James Wood, Martin Lundblad, Olle Lindvall, Malin Parmar. Cell Rep 2012
400
13


Shared and distinct transcriptomic cell types across neocortical areas.
Bosiljka Tasic, Zizhen Yao, Lucas T Graybuck, Kimberly A Smith, Thuc Nghi Nguyen, Darren Bertagnolli, Jeff Goldy, Emma Garren, Michael N Economo, Sarada Viswanathan,[...]. Nature 2018
506
11

Three-dimensional intact-tissue sequencing of single-cell transcriptional states.
Xiao Wang, William E Allen, Matthew A Wright, Emily L Sylwestrak, Nikolay Samusik, Sam Vesuna, Kathryn Evans, Cindy Liu, Charu Ramakrishnan, Jia Liu,[...]. Science 2018
370
11


Whole-brain mapping of direct inputs to midbrain dopamine neurons.
Mitsuko Watabe-Uchida, Lisa Zhu, Sachie K Ogawa, Archana Vamanrao, Naoshige Uchida. Neuron 2012
700
11

Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding.
Alexander B Rosenberg, Charles M Roco, Richard A Muscat, Anna Kuchina, Paul Sample, Zizhen Yao, Lucas T Graybuck, David J Peeler, Sumit Mukherjee, Wei Chen,[...]. Science 2018
425
11

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets.
Evan Z Macosko, Anindita Basu, Rahul Satija, James Nemesh, Karthik Shekhar, Melissa Goldman, Itay Tirosh, Allison R Bialas, Nolan Kamitaki, Emily M Martersteck,[...]. Cell 2015
11

Ventral tegmental area: cellular heterogeneity, connectivity and behaviour.
Marisela Morales, Elyssa B Margolis. Nat Rev Neurosci 2017
440
11

Human iPS cell-derived dopaminergic neurons function in a primate Parkinson's disease model.
Tetsuhiro Kikuchi, Asuka Morizane, Daisuke Doi, Hiroaki Magotani, Hirotaka Onoe, Takuya Hayashi, Hiroshi Mizuma, Sayuki Takara, Ryosuke Takahashi, Haruhisa Inoue,[...]. Nature 2017
299
11

Identification of midbrain floor plate radial glia-like cells as dopaminergic progenitors.
Sonia Bonilla, Anita C Hall, Luisa Pinto, Alessio Attardo, Magdalena Götz, Wieland B Huttner, Ernest Arenas. Glia 2008
91
11

Differences in neurogenic potential in floor plate cells along an anteroposterior location: midbrain dopaminergic neurons originate from mesencephalic floor plate cells.
Yuichi Ono, Tomoya Nakatani, Yoshimasa Sakamoto, Eri Mizuhara, Yasuko Minaki, Minoru Kumai, Akiko Hamaguchi, Miyuki Nishimura, Yoko Inoue, Hideki Hayashi,[...]. Development 2007
218
11

Integrative single-cell analysis of transcriptional and epigenetic states in the human adult brain.
Blue B Lake, Song Chen, Brandon C Sos, Jean Fan, Gwendolyn E Kaeser, Yun C Yung, Thu E Duong, Derek Gao, Jerold Chun, Peter V Kharchenko,[...]. Nat Biotechnol 2018
336
10

Human Trials of Stem Cell-Derived Dopamine Neurons for Parkinson's Disease: Dawn of a New Era.
Roger A Barker, Malin Parmar, Lorenz Studer, Jun Takahashi. Cell Stem Cell 2017
172
10

Dopamine neuron activity before action initiation gates and invigorates future movements.
Joaquim Alves da Silva, Fatuel Tecuapetla, Vitor Paixão, Rui M Costa. Nature 2018
182
10

Selective neuronal vulnerability in Parkinson disease.
D James Surmeier, José A Obeso, Glenda M Halliday. Nat Rev Neurosci 2017
408
10

Single nigrostriatal dopaminergic neurons form widely spread and highly dense axonal arborizations in the neostriatum.
Wakoto Matsuda, Takahiro Furuta, Kouichi C Nakamura, Hiroyuki Hioki, Fumino Fujiyama, Ryohachi Arai, Takeshi Kaneko. J Neurosci 2009
436
10

Unique properties of mesoprefrontal neurons within a dual mesocorticolimbic dopamine system.
Stephan Lammel, Andrea Hetzel, Olga Häckel, Ian Jones, Birgit Liss, Jochen Roeper. Neuron 2008
589
10

Single-Cell Sequencing of iPSC-Dopamine Neurons Reconstructs Disease Progression and Identifies HDAC4 as a Regulator of Parkinson Cell Phenotypes.
Charmaine Lang, Kieran R Campbell, Brent J Ryan, Phillippa Carling, Moustafa Attar, Jane Vowles, Olga V Perestenko, Rory Bowden, Fahd Baig, Meike Kasten,[...]. Cell Stem Cell 2019
53
15

Neuronal subtypes and diversity revealed by single-nucleus RNA sequencing of the human brain.
Blue B Lake, Rizi Ai, Gwendolyn E Kaeser, Neeraj S Salathia, Yun C Yung, Rui Liu, Andre Wildberg, Derek Gao, Ho-Lim Fung, Song Chen,[...]. Science 2016
418
10

Isolation of human induced pluripotent stem cell-derived dopaminergic progenitors by cell sorting for successful transplantation.
Daisuke Doi, Bumpei Samata, Mitsuko Katsukawa, Tetsuhiro Kikuchi, Asuka Morizane, Yuichi Ono, Kiyotoshi Sekiguchi, Masato Nakagawa, Malin Parmar, Jun Takahashi. Stem Cell Reports 2014
254
10

Molecular heterogeneity of midbrain dopaminergic neurons--Moving toward single cell resolution.
Angela Anderegg, Jean-Francois Poulin, Rajeshwar Awatramani. FEBS Lett 2015
39
20

Circuit Architecture of VTA Dopamine Neurons Revealed by Systematic Input-Output Mapping.
Kevin T Beier, Elizabeth E Steinberg, Katherine E DeLoach, Stanley Xie, Kazunari Miyamichi, Lindsay Schwarz, Xiaojing J Gao, Eric J Kremer, Robert C Malenka, Liqun Luo. Cell 2015
415
9

Disease duration and the integrity of the nigrostriatal system in Parkinson's disease.
Jeffrey H Kordower, C Warren Olanow, Hemraj B Dodiya, Yaping Chu, Thomas G Beach, Charles H Adler, Glenda M Halliday, Raymond T Bartus. Brain 2013
611
9

Intact-Brain Analyses Reveal Distinct Information Carried by SNc Dopamine Subcircuits.
Talia N Lerner, Carrie Shilyansky, Thomas J Davidson, Kathryn E Evans, Kevin T Beier, Kelly A Zalocusky, Ailey K Crow, Robert C Malenka, Liqun Luo, Raju Tomer,[...]. Cell 2015
329
9

A Single-Cell Transcriptional Atlas of the Developing Murine Cerebellum.
Robert A Carter, Laure Bihannic, Celeste Rosencrance, Jennifer L Hadley, Yiai Tong, Timothy N Phoenix, Sivaraman Natarajan, John Easton, Paul A Northcott, Charles Gawad. Curr Biol 2018
83
9

Disentangling neural cell diversity using single-cell transcriptomics.
Jean-Francois Poulin, Bosiljka Tasic, Jens Hjerling-Leffler, Jeffrey M Trimarchi, Rajeshwar Awatramani. Nat Neurosci 2016
169
9

A single-cell RNA-seq survey of the developmental landscape of the human prefrontal cortex.
Suijuan Zhong, Shu Zhang, Xiaoying Fan, Qian Wu, Liying Yan, Ji Dong, Haofeng Zhang, Long Li, Le Sun, Na Pan,[...]. Nature 2018
252
9

Low-coverage single-cell mRNA sequencing reveals cellular heterogeneity and activated signaling pathways in developing cerebral cortex.
Alex A Pollen, Tomasz J Nowakowski, Joe Shuga, Xiaohui Wang, Anne A Leyrat, Jan H Lui, Nianzhen Li, Lukasz Szpankowski, Brian Fowler, Peilin Chen,[...]. Nat Biotechnol 2014
489
9

Spatiotemporal gene expression trajectories reveal developmental hierarchies of the human cortex.
Tomasz J Nowakowski, Aparna Bhaduri, Alex A Pollen, Beatriz Alvarado, Mohammed A Mostajo-Radji, Elizabeth Di Lullo, Maximilian Haeussler, Carmen Sandoval-Espinosa, Siyuan John Liu, Dmitry Velmeshev,[...]. Science 2017
335
9

Slide-seq: A scalable technology for measuring genome-wide expression at high spatial resolution.
Samuel G Rodriques, Robert R Stickels, Aleksandrina Goeva, Carly A Martin, Evan Murray, Charles R Vanderburg, Joshua Welch, Linlin M Chen, Fei Chen, Evan Z Macosko. Science 2019
511
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.